RNA–Protein interactions for RNA: ENST00000624204.3

PMS1-221, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 3,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-221ENST00000624204 FAM205CA6NFA0 338 aa16.99■□□□□ 0.31
PMS1-221ENST00000624204 RPSAP08865 295 aaKnown RBP16.99■□□□□ 0.31
PMS1-221ENST00000624204 FECHP22830 423 aa16.99■□□□□ 0.31
PMS1-221ENST00000624204 EHBP1Q8NDI1 1231 aa16.99■□□□□ 0.31
PMS1-221ENST00000624204 SYMPKQ92797 1274 aaKnown RBP16.99■□□□□ 0.31
PMS1-221ENST00000624204 CEP131Q9UPN4 1083 aa16.99■□□□□ 0.31
PMS1-221ENST00000624204 FSBPO95073 299 aa16.98■□□□□ 0.31
PMS1-221ENST00000624204 TRIM14Q14142 442 aa16.98■□□□□ 0.31
PMS1-221ENST00000624204 CCDC181Q5TID7 509 aa16.98■□□□□ 0.31
PMS1-221ENST00000624204 NAA35Q5VZE5 725 aa16.98■□□□□ 0.31
PMS1-221ENST00000624204 IFT81Q8WYA0 676 aa16.98■□□□□ 0.31
PMS1-221ENST00000624204 CCDC114Q96M63 670 aa16.98■□□□□ 0.31
PMS1-221ENST00000624204 RCCD1A6NED2 376 aa16.98■□□□□ 0.31
PMS1-221ENST00000624204 KRT83P78385 493 aa16.98■□□□□ 0.31
PMS1-221ENST00000624204 RNPC3Q96LT9 517 aaKnown RBP16.98■□□□□ 0.31
PMS1-221ENST00000624204 BCCIPQ9P287 314 aaKnown RBP eCLIP16.98■□□□□ 0.31
PMS1-221ENST00000624204 EIF4E1BA6NMX2 242 aaKnown RBP16.98■□□□□ 0.31
PMS1-221ENST00000624204 LTKP29376 864 aa16.98■□□□□ 0.31
PMS1-221ENST00000624204 LSP1P33241 339 aa16.98■□□□□ 0.31
PMS1-221ENST00000624204 TCP11X2Q5H9J9 407 aa16.98■□□□□ 0.31
PMS1-221ENST00000624204 LRCH2Q5VUJ6 765 aa16.98■□□□□ 0.31
PMS1-221ENST00000624204 IQCA1Q86XH1 822 aa16.98■□□□□ 0.31
PMS1-221ENST00000624204 FAM217BQ9NTX9 383 aaPredicted RBP16.98■□□□□ 0.31
PMS1-221ENST00000624204 SEMA3EO15041 775 aa16.97■□□□□ 0.31
PMS1-221ENST00000624204 ZFYP08048 801 aaPredicted RBP16.97■□□□□ 0.31
PMS1-221ENST00000624204 SATB1Q01826 763 aa16.97■□□□□ 0.31
PMS1-221ENST00000624204 SPAG1Q07617 926 aa16.97■□□□□ 0.31
PMS1-221ENST00000624204 TICAM2Q86XR7 235 aa16.97■□□□□ 0.31
PMS1-221ENST00000624204 NELFBQ8WX92 580 aa16.97■□□□□ 0.31
PMS1-221ENST00000624204 GSDMAQ96QA5 445 aa16.97■□□□□ 0.31
PMS1-221ENST00000624204 OVOS2A0A0G2JMS6 1433 aa16.97■□□□□ 0.31
PMS1-221ENST00000624204 EYA2O00167 538 aa16.97■□□□□ 0.31
PMS1-221ENST00000624204 TULP1O00294 542 aaPredicted RBP16.97■□□□□ 0.31
PMS1-221ENST00000624204 SKAP2O75563 359 aaPredicted RBP16.97■□□□□ 0.31
PMS1-221ENST00000624204 PAK1Q13153 545 aa16.97■□□□□ 0.31
PMS1-221ENST00000624204 CCDC13Q8IYE1 715 aa16.97■□□□□ 0.31
PMS1-221ENST00000624204 WASF1Q92558 559 aa16.97■□□□□ 0.31
PMS1-221ENST00000624204 MIEF2Q96C03 454 aa16.97■□□□□ 0.31
PMS1-221ENST00000624204 ZNF496Q96IT1 587 aaPredicted RBP16.97■□□□□ 0.31
PMS1-221ENST00000624204 ZIM3Q96PE6 472 aa16.97■□□□□ 0.31
PMS1-221ENST00000624204 STRN4Q9NRL3 753 aa16.97■□□□□ 0.31
PMS1-221ENST00000624204 PXDNQ92626 1479 aa16.96■□□□□ 0.31
PMS1-221ENST00000624204 ESYT3A0FGR9 886 aa16.96■□□□□ 0.31
PMS1-221ENST00000624204 DDR1Q08345 913 aa16.96■□□□□ 0.31
PMS1-221ENST00000624204 CCDC96Q2M329 555 aa16.96■□□□□ 0.31
PMS1-221ENST00000624204 LIMA1Q9UHB6 759 aaKnown RBP16.96■□□□□ 0.31
PMS1-221ENST00000624204 E7EVH7 732 aa16.96■□□□□ 0.31
PMS1-221ENST00000624204 PAX7P23759 505 aa16.96■□□□□ 0.31
PMS1-221ENST00000624204 GUCY2FP51841 1108 aa16.96■□□□□ 0.31
PMS1-221ENST00000624204 HDLBPQ00341 1268 aaKnown RBP16.96■□□□□ 0.31
PMS1-221ENST00000624204 PPANQ9NQ55 473 aaKnown RBP16.96■□□□□ 0.31
PMS1-221ENST00000624204 ZNHIT6Q9NWK9 470 aaKnown RBP16.96■□□□□ 0.31
PMS1-221ENST00000624204 TRIM75PA6NK02 468 aa16.96■□□□□ 0.31
PMS1-221ENST00000624204 TRIM21P19474 475 aaKnown RBP16.96■□□□□ 0.31
PMS1-221ENST00000624204 CYLC1P35663 651 aaPredicted RBP16.96■□□□□ 0.31
PMS1-221ENST00000624204 KIF5AQ12840 1032 aa16.96■□□□□ 0.31
PMS1-221ENST00000624204 ZNF579Q8NAF0 562 aaKnown RBP16.96■□□□□ 0.31
PMS1-221ENST00000624204 PROCA1Q8NCQ7 364 aaPredicted RBP16.96■□□□□ 0.31
PMS1-221ENST00000624204 ZNF473Q8WTR7 871 aaKnown RBP16.96■□□□□ 0.31
PMS1-221ENST00000624204 CCDC43Q96MW1 224 aaKnown RBP16.96■□□□□ 0.31
PMS1-221ENST00000624204 MCM8Q9UJA3 840 aa16.96■□□□□ 0.31
PMS1-221ENST00000624204 PRDM1O75626 825 aa16.95■□□□□ 0.3
PMS1-221ENST00000624204 EPHB4P54760 987 aa16.95■□□□□ 0.3
PMS1-221ENST00000624204 CFAP58Q5T655 872 aa16.95■□□□□ 0.3
PMS1-221ENST00000624204 XAGE2Q96GT9 111 aa16.95■□□□□ 0.3
PMS1-221ENST00000624204 PDHBP11177 359 aa16.95■□□□□ 0.3
PMS1-221ENST00000624204 CEBPAP49715 358 aaPredicted RBP16.95■□□□□ 0.3
PMS1-221ENST00000624204 CLNS1AP54105 237 aaKnown RBP16.95■□□□□ 0.3
PMS1-221ENST00000624204 STAG1Q8WVM7 1258 aa16.95■□□□□ 0.3
PMS1-221ENST00000624204 SLC40A1Q9NP59 571 aa16.95■□□□□ 0.3
PMS1-221ENST00000624204 A1CFQ9NQ94 594 aaKnown RBP16.95■□□□□ 0.3
PMS1-221ENST00000624204 TRIM49BA6NDI0 452 aa16.95■□□□□ 0.3
PMS1-221ENST00000624204 FMNL1O95466 1100 aaPredicted RBP16.95■□□□□ 0.3
PMS1-221ENST00000624204 SKOR1P84550 965 aa16.95■□□□□ 0.3
PMS1-221ENST00000624204 CTDSPL2Q05D32 466 aa16.95■□□□□ 0.3
PMS1-221ENST00000624204 ZNF174Q15697 407 aa16.95■□□□□ 0.3
PMS1-221ENST00000624204 SPATA4Q8NEY3 305 aa16.95■□□□□ 0.3
PMS1-221ENST00000624204 LY9Q9HBG7 655 aa16.95■□□□□ 0.3
PMS1-221ENST00000624204 KCNG1Q9UIX4 513 aa16.95■□□□□ 0.3
PMS1-221ENST00000624204 HEG1Q9ULI3 1381 aa16.95■□□□□ 0.3
PMS1-221ENST00000624204 PIK3C2AO00443 1686 aa16.95■□□□□ 0.3
PMS1-221ENST00000624204 KDM3BQ7LBC6 1761 aa16.95■□□□□ 0.3
PMS1-221ENST00000624204 GOLGA6L7A0A1B0GV03 622 aa16.94■□□□□ 0.3
PMS1-221ENST00000624204 FOXO4P98177 505 aa16.94■□□□□ 0.3
PMS1-221ENST00000624204 PREPLQ4J6C6 727 aaPredicted RBP16.94■□□□□ 0.3
PMS1-221ENST00000624204 CCDC121Q6ZUS5 278 aa16.94■□□□□ 0.3
PMS1-221ENST00000624204 SPATS2Q86XZ4 545 aaKnown RBP16.94■□□□□ 0.3
PMS1-221ENST00000624204 CCT8L2Q96SF2 557 aa16.94■□□□□ 0.3
PMS1-221ENST00000624204 EPN3Q9H201 632 aa16.94■□□□□ 0.3
PMS1-221ENST00000624204 MAP3K15Q6ZN16 1313 aa16.94■□□□□ 0.3
PMS1-221ENST00000624204 MED1Q15648 1581 aaPredicted RBP16.94■□□□□ 0.3
PMS1-221ENST00000624204 SRCAPQ6ZRS2 3230 aa16.94■□□□□ 0.3
PMS1-221ENST00000624204 RTN1Q16799 776 aa16.94■□□□□ 0.3
PMS1-221ENST00000624204 WDR59Q6PJI9 974 aa16.94■□□□□ 0.3
PMS1-221ENST00000624204 KRT26Q7Z3Y9 468 aa16.94■□□□□ 0.3
PMS1-221ENST00000624204 IGDCC4Q8TDY8 1250 aa16.94■□□□□ 0.3
PMS1-221ENST00000624204 TMEM87BQ96K49 555 aa16.94■□□□□ 0.3
PMS1-221ENST00000624204 CARD10Q9BWT7 1032 aa16.94■□□□□ 0.3
PMS1-221ENST00000624204 FOXP1Q9H334 677 aaPredicted RBP16.94■□□□□ 0.3
PMS1-221ENST00000624204 VCPKMTQ9H867 229 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms