RNA–Protein interactions for RNA: ENST00000623364.3

CDKL5-204, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 3

Gene CDKL5, Length 483 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-204ENST00000623364 TCEAL5Q5H9L2 206 aa8.34□□□□□ -1.07
CDKL5-204ENST00000623364 PRAMEF19Q5SWL8 479 aa8.34□□□□□ -1.07
CDKL5-204ENST00000623364 ZC3H14Q6PJT7 736 aaKnown RBP8.34□□□□□ -1.07
CDKL5-204ENST00000623364 RPAINQ86UA6 219 aa8.34□□□□□ -1.07
CDKL5-204ENST00000623364 CCDC84Q86UT8 332 aaPredicted RBP8.34□□□□□ -1.07
CDKL5-204ENST00000623364 CRIPAKQ8N1N5 446 aa8.34□□□□□ -1.07
CDKL5-204ENST00000623364 KDF1Q8NAX2 398 aaPredicted RBP8.34□□□□□ -1.07
CDKL5-204ENST00000623364 ZNF280CQ8ND82 737 aa8.34□□□□□ -1.07
CDKL5-204ENST00000623364 PIK3R5Q8WYR1 880 aa8.34□□□□□ -1.07
CDKL5-204ENST00000623364 SIN3AQ96ST3 1273 aa8.34□□□□□ -1.07
CDKL5-204ENST00000623364 R4GN57 208 aa8.34□□□□□ -1.07
CDKL5-204ENST00000623364 ABCA12Q86UK0 2595 aa8.34□□□□□ -1.07
CDKL5-204ENST00000623364 DOCK1Q14185 1865 aa8.34□□□□□ -1.07
CDKL5-204ENST00000623364 SMCHD1A6NHR9 2005 aa8.34□□□□□ -1.07
CDKL5-204ENST00000623364 UMODL1Q5DID0 1318 aa8.33□□□□□ -1.08
CDKL5-204ENST00000623364 DSPP15924 2871 aaKnown RBP8.33□□□□□ -1.08
CDKL5-204ENST00000623364 A0A0U1RQG5 324 aaPredicted RBP8.33□□□□□ -1.08
CDKL5-204ENST00000623364 HOXA7P31268 230 aaPredicted RBP8.33□□□□□ -1.08
CDKL5-204ENST00000623364 LTBRP36941 435 aa8.33□□□□□ -1.08
CDKL5-204ENST00000623364 RBM25P49756 843 aaKnown RBP8.33□□□□□ -1.08
CDKL5-204ENST00000623364 APOBEC3HQ6NTF7 200 aaKnown RBP8.33□□□□□ -1.08
CDKL5-204ENST00000623364 NBEAQ8NFP9 2946 aa8.33□□□□□ -1.08
CDKL5-204ENST00000623364 MPHOSPH8Q99549 860 aa8.33□□□□□ -1.08
CDKL5-204ENST00000623364 ZBED2Q9BTP6 218 aa8.33□□□□□ -1.08
CDKL5-204ENST00000623364 TBC1D2Q9BYX2 928 aa8.33□□□□□ -1.08
CDKL5-204ENST00000623364 MFSD1Q9H3U5 465 aa8.33□□□□□ -1.08
CDKL5-204ENST00000623364 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.33□□□□□ -1.08
CDKL5-204ENST00000623364 CD207Q9UJ71 328 aa8.33□□□□□ -1.08
CDKL5-204ENST00000623364 LCHNA4D1U4 455 aa8.32□□□□□ -1.08
CDKL5-204ENST00000623364 SRRM3A6NNA2 597 aaPredicted RBP8.32□□□□□ -1.08
CDKL5-204ENST00000623364 CD4P01730 458 aa8.32□□□□□ -1.08
CDKL5-204ENST00000623364 PCCAP05165 728 aaPredicted RBP8.32□□□□□ -1.08
CDKL5-204ENST00000623364 PMLP29590 882 aa8.32□□□□□ -1.08
CDKL5-204ENST00000623364 CTSWP56202 376 aa8.32□□□□□ -1.08
CDKL5-204ENST00000623364 ZNF200P98182 395 aaPredicted RBP8.32□□□□□ -1.08
CDKL5-204ENST00000623364 KCNA10Q16322 511 aa8.32□□□□□ -1.08
CDKL5-204ENST00000623364 UNQ6494/PRO21346Q6UXR6 183 aa8.32□□□□□ -1.08
CDKL5-204ENST00000623364 FBXO22Q8NEZ5 403 aa8.32□□□□□ -1.08
CDKL5-204ENST00000623364 MRIQ9BWK5 157 aa8.32□□□□□ -1.08
CDKL5-204ENST00000623364 NSUN3Q9H649 340 aaKnown RBP8.32□□□□□ -1.08
CDKL5-204ENST00000623364 SLC5A4Q9NY91 659 aa8.32□□□□□ -1.08
CDKL5-204ENST00000623364 TMOD4Q9NZQ9 345 aa8.32□□□□□ -1.08
CDKL5-204ENST00000623364 NCDNQ9UBB6 729 aa8.32□□□□□ -1.08
CDKL5-204ENST00000623364 A0A1B0GUL6 1792 aa8.32□□□□□ -1.08
CDKL5-204ENST00000623364 MYO9AB2RTY4 2548 aa8.31□□□□□ -1.08
CDKL5-204ENST00000623364 IGSF10Q6WRI0 2623 aa8.31□□□□□ -1.08
CDKL5-204ENST00000623364 TMEM8BA6NDV4 472 aa8.31□□□□□ -1.08
CDKL5-204ENST00000623364 C1QTNF9BB2RNN3 333 aa8.31□□□□□ -1.08
CDKL5-204ENST00000623364 MAP3K13O43283 966 aa8.31□□□□□ -1.08
CDKL5-204ENST00000623364 C1QTNF9P0C862 333 aa8.31□□□□□ -1.08
CDKL5-204ENST00000623364 PRKAR2BP31323 418 aa8.31□□□□□ -1.08
CDKL5-204ENST00000623364 CHRNDQ07001 517 aa8.31□□□□□ -1.08
CDKL5-204ENST00000623364 SH3D19Q5HYK7 790 aa8.31□□□□□ -1.08
CDKL5-204ENST00000623364 CCDC105Q8IYK2 499 aa8.31□□□□□ -1.08
CDKL5-204ENST00000623364 ADAM32Q8TC27 787 aa8.31□□□□□ -1.08
CDKL5-204ENST00000623364 DCBLD2Q96PD2 775 aa8.31□□□□□ -1.08
CDKL5-204ENST00000623364 CRBNQ96SW2 442 aa8.31□□□□□ -1.08
CDKL5-204ENST00000623364 NOC4LQ9BVI4 516 aaKnown RBP8.31□□□□□ -1.08
CDKL5-204ENST00000623364 WNT8AQ9H1J5 351 aa8.31□□□□□ -1.08
CDKL5-204ENST00000623364 GREM2Q9H772 168 aa8.31□□□□□ -1.08
CDKL5-204ENST00000623364 NRBP1Q9UHY1 535 aa8.31□□□□□ -1.08
CDKL5-204ENST00000623364 SIP14410 1827 aa8.31□□□□□ -1.08
CDKL5-204ENST00000623364 SNAP23O00161 211 aa8.3□□□□□ -1.08
CDKL5-204ENST00000623364 ADAMTS4O75173 837 aa8.3□□□□□ -1.08
CDKL5-204ENST00000623364 KCNJ6P48051 423 aa8.3□□□□□ -1.08
CDKL5-204ENST00000623364 CTC1Q2NKJ3 1217 aa8.3□□□□□ -1.08
CDKL5-204ENST00000623364 DEFB128Q7Z7B8 93 aa8.3□□□□□ -1.08
CDKL5-204ENST00000623364 TTLL11Q8NHH1 800 aa8.3□□□□□ -1.08
CDKL5-204ENST00000623364 SECISBP2LQ93073 1101 aaKnown RBP8.3□□□□□ -1.08
CDKL5-204ENST00000623364 SCLYQ96I15 445 aa8.3□□□□□ -1.08
CDKL5-204ENST00000623364 RPGRIP1Q96KN7 1286 aa8.3□□□□□ -1.08
CDKL5-204ENST00000623364 RABGAP1Q9Y3P9 1069 aa8.3□□□□□ -1.08
CDKL5-204ENST00000623364 MAST3O60307 1309 aa8.29□□□□□ -1.08
CDKL5-204ENST00000623364 PIEZO2Q9H5I5 2752 aa8.29□□□□□ -1.08
CDKL5-204ENST00000623364 MYO7AQ13402 2215 aa8.29□□□□□ -1.08
CDKL5-204ENST00000623364 ADORA2AP29274 412 aa8.29□□□□□ -1.08
CDKL5-204ENST00000623364 CLCN6P51797 869 aa8.29□□□□□ -1.08
CDKL5-204ENST00000623364 DLX2Q07687 328 aaPredicted RBP8.29□□□□□ -1.08
CDKL5-204ENST00000623364 LARP1BQ659C4 914 aaKnown RBP8.29□□□□□ -1.08
CDKL5-204ENST00000623364 UBALD2Q8IYN6 164 aa8.29□□□□□ -1.08
CDKL5-204ENST00000623364 DTWD2Q8NBA8 298 aa8.29□□□□□ -1.08
CDKL5-204ENST00000623364 PCSK9Q8NBP7 692 aaKnown RBP8.29□□□□□ -1.08
CDKL5-204ENST00000623364 JARID2Q92833 1246 aaPredicted RBP8.29□□□□□ -1.08
CDKL5-204ENST00000623364 VWCEQ96DN2 955 aa8.29□□□□□ -1.08
CDKL5-204ENST00000623364 KIF16BQ96L93 1317 aa8.29□□□□□ -1.08
CDKL5-204ENST00000623364 LINC01553A4QN01 128 aa8.28□□□□□ -1.08
CDKL5-204ENST00000623364 STRNO43815 780 aa8.28□□□□□ -1.08
CDKL5-204ENST00000623364 TAF5LO75529 589 aa8.28□□□□□ -1.08
CDKL5-204ENST00000623364 AKR1A1P14550 325 aa8.28□□□□□ -1.08
CDKL5-204ENST00000623364 GRIK5Q16478 980 aa8.28□□□□□ -1.08
CDKL5-204ENST00000623364 VARS2Q5ST30 1063 aaKnown RBP8.28□□□□□ -1.08
CDKL5-204ENST00000623364 HHIPL2Q6UWX4 724 aa8.28□□□□□ -1.08
CDKL5-204ENST00000623364 ZSCAN29Q8IWY8 852 aaPredicted RBP8.28□□□□□ -1.08
CDKL5-204ENST00000623364 KLHDC9Q8NEP7 349 aa8.28□□□□□ -1.08
CDKL5-204ENST00000623364 TBC1D22AQ8WUA7 517 aa8.28□□□□□ -1.08
CDKL5-204ENST00000623364 DDX1Q92499 740 aaKnown RBP8.28□□□□□ -1.08
CDKL5-204ENST00000623364 PHF7Q9BWX1 381 aaPredicted RBP8.28□□□□□ -1.08
CDKL5-204ENST00000623364 AS3MTQ9HBK9 375 aa8.28□□□□□ -1.08
CDKL5-204ENST00000623364 SPTAN1Q13813 2472 aaKnown RBP8.28□□□□□ -1.08
CDKL5-204ENST00000623364 SYNRGQ9UMZ2 1314 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms