RNA–Protein interactions for RNA: ENST00000623253.4_PAR_Y

CD99-211, Transcript of CD99 molecule (Xg blood group), humanhuman

TSL 1 (best)

Gene CD99, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD99-211ENST00000623253_PAR_Y USP17L12C9JPN9 530 aa19.5■□□□□ 0.71
CD99-211ENST00000623253_PAR_Y USP17L21D6R901 530 aa19.5■□□□□ 0.71
CD99-211ENST00000623253_PAR_Y WDR46O15213 610 aaKnown RBP19.5■□□□□ 0.71
CD99-211ENST00000623253_PAR_Y SLC25A27O95847 323 aa19.5■□□□□ 0.71
CD99-211ENST00000623253_PAR_Y PGK2P07205 417 aa19.5■□□□□ 0.71
CD99-211ENST00000623253_PAR_Y EEF2P13639 858 aaKnown RBP19.5■□□□□ 0.71
CD99-211ENST00000623253_PAR_Y ADD2P35612 726 aa19.5■□□□□ 0.71
CD99-211ENST00000623253_PAR_Y C12orf60Q5U649 245 aa19.5■□□□□ 0.71
CD99-211ENST00000623253_PAR_Y RPAP2Q8IXW5 612 aaPredicted RBP19.5■□□□□ 0.71
CD99-211ENST00000623253_PAR_Y XPNPEP3Q9NQH7 507 aa19.5■□□□□ 0.71
CD99-211ENST00000623253_PAR_Y ZNF236Q9UL36 1845 aa19.49■□□□□ 0.71
CD99-211ENST00000623253_PAR_Y MS4A1P11836 297 aa19.49■□□□□ 0.71
CD99-211ENST00000623253_PAR_Y KCTD2Q14681 263 aa19.49■□□□□ 0.71
CD99-211ENST00000623253_PAR_Y SH3RF1Q7Z6J0 888 aa19.49■□□□□ 0.71
CD99-211ENST00000623253_PAR_Y FBXO28Q9NVF7 368 aa19.49■□□□□ 0.71
CD99-211ENST00000623253_PAR_Y SLC4A4Q9Y6R1 1079 aa19.49■□□□□ 0.71
CD99-211ENST00000623253_PAR_Y DNAH12Q6ZR08 3092 aa19.49■□□□□ 0.71
CD99-211ENST00000623253_PAR_Y RAB11FIP3O75154 756 aa19.48■□□□□ 0.71
CD99-211ENST00000623253_PAR_Y CHGBP05060 677 aa19.48■□□□□ 0.71
CD99-211ENST00000623253_PAR_Y RARBP10826 455 aa19.48■□□□□ 0.71
CD99-211ENST00000623253_PAR_Y TLE2Q04725 743 aa19.48■□□□□ 0.71
CD99-211ENST00000623253_PAR_Y SNX17Q15036 470 aa19.48■□□□□ 0.71
CD99-211ENST00000623253_PAR_Y COL25A1Q9BXS0 654 aaPredicted RBP19.48■□□□□ 0.71
CD99-211ENST00000623253_PAR_Y KANSL2Q9H9L4 492 aa19.48■□□□□ 0.71
CD99-211ENST00000623253_PAR_Y PDLIM7Q9NR12 457 aa19.48■□□□□ 0.71
CD99-211ENST00000623253_PAR_Y COG6Q9Y2V7 657 aa19.48■□□□□ 0.71
CD99-211ENST00000623253_PAR_Y A0A0G2JMZ2 1700 aa19.48■□□□□ 0.71
CD99-211ENST00000623253_PAR_Y TRIM43BA6NCK2 446 aa19.47■□□□□ 0.71
CD99-211ENST00000623253_PAR_Y PGK1P00558 417 aa19.47■□□□□ 0.71
CD99-211ENST00000623253_PAR_Y ATP5JP18859 108 aa19.47■□□□□ 0.71
CD99-211ENST00000623253_PAR_Y STAT3P40763 770 aa19.47■□□□□ 0.71
CD99-211ENST00000623253_PAR_Y C16orf86Q6ZW13 317 aa19.47■□□□□ 0.71
CD99-211ENST00000623253_PAR_Y RIOX2Q8IUF8 465 aa19.47■□□□□ 0.71
CD99-211ENST00000623253_PAR_Y SIRT2Q8IXJ6 389 aa19.47■□□□□ 0.71
CD99-211ENST00000623253_PAR_Y TRIM43Q96BQ3 446 aaPredicted RBP19.47■□□□□ 0.71
CD99-211ENST00000623253_PAR_Y CDX2Q99626 313 aaPredicted RBP19.47■□□□□ 0.71
CD99-211ENST00000623253_PAR_Y GOPCQ9HD26 462 aa19.47■□□□□ 0.71
CD99-211ENST00000623253_PAR_Y VWA5AO00534 786 aa19.46■□□□□ 0.71
CD99-211ENST00000623253_PAR_Y TAL1P17542 331 aaPredicted RBP19.46■□□□□ 0.71
CD99-211ENST00000623253_PAR_Y FAM83BQ5T0W9 1011 aa19.46■□□□□ 0.71
CD99-211ENST00000623253_PAR_Y RNF180Q86T96 592 aa19.46■□□□□ 0.71
CD99-211ENST00000623253_PAR_Y HAUS7Q99871 368 aa19.46■□□□□ 0.71
CD99-211ENST00000623253_PAR_Y TINF2Q9BSI4 451 aa19.46■□□□□ 0.71
CD99-211ENST00000623253_PAR_Y SEMA6BQ9H3T3 888 aa19.46■□□□□ 0.71
CD99-211ENST00000623253_PAR_Y NRBP1Q9UHY1 535 aa19.46■□□□□ 0.71
CD99-211ENST00000623253_PAR_Y ADAMTS5Q9UNA0 930 aa19.46■□□□□ 0.71
CD99-211ENST00000623253_PAR_Y PHF24Q9UPV7 400 aa19.46■□□□□ 0.71
CD99-211ENST00000623253_PAR_Y RLFQ13129 1914 aa19.46■□□□□ 0.71
CD99-211ENST00000623253_PAR_Y SLC4A3P48751 1232 aa19.45■□□□□ 0.7
CD99-211ENST00000623253_PAR_Y UBE3CQ15386 1083 aa19.45■□□□□ 0.7
CD99-211ENST00000623253_PAR_Y C1orf53Q5VUE5 145 aa19.45■□□□□ 0.7
CD99-211ENST00000623253_PAR_Y CTR9Q6PD62 1173 aa19.45■□□□□ 0.7
CD99-211ENST00000623253_PAR_Y STK11IPQ8N1F8 1099 aa19.45■□□□□ 0.7
CD99-211ENST00000623253_PAR_Y PPP1R9AQ9ULJ8 1098 aa19.45■□□□□ 0.7
CD99-211ENST00000623253_PAR_Y DDX19BQ9UMR2 479 aa19.45■□□□□ 0.7
CD99-211ENST00000623253_PAR_Y TACC3Q9Y6A5 838 aa19.45■□□□□ 0.7
CD99-211ENST00000623253_PAR_Y LTBP2Q14767 1821 aa19.45■□□□□ 0.7
CD99-211ENST00000623253_PAR_Y PQBP1O60828 265 aaKnown RBP19.44■□□□□ 0.7
CD99-211ENST00000623253_PAR_Y CLTBP09497 229 aa19.44■□□□□ 0.7
CD99-211ENST00000623253_PAR_Y ZNF792Q3KQV3 632 aa19.44■□□□□ 0.7
CD99-211ENST00000623253_PAR_Y ZSCAN25Q6NSZ9 544 aa19.44■□□□□ 0.7
CD99-211ENST00000623253_PAR_Y ZBTB40Q9NUA8 1239 aa19.44■□□□□ 0.7
CD99-211ENST00000623253_PAR_Y CNPY2Q9Y2B0 182 aa19.44■□□□□ 0.7
CD99-211ENST00000623253_PAR_Y AKR1A1P14550 325 aa19.43■□□□□ 0.7
CD99-211ENST00000623253_PAR_Y RAG1P15918 1043 aa19.43■□□□□ 0.7
CD99-211ENST00000623253_PAR_Y LENG1Q96BZ8 264 aaPredicted RBP19.43■□□□□ 0.7
CD99-211ENST00000623253_PAR_Y NUP88Q99567 741 aaPredicted RBP19.43■□□□□ 0.7
CD99-211ENST00000623253_PAR_Y PUS7LQ9H0K6 701 aaKnown RBP19.43■□□□□ 0.7
CD99-211ENST00000623253_PAR_Y DIS3Q9Y2L1 958 aaKnown RBP19.43■□□□□ 0.7
CD99-211ENST00000623253_PAR_Y MYH8P13535 1937 aa19.43■□□□□ 0.7
CD99-211ENST00000623253_PAR_Y A0A1W2PQ45 241 aaPredicted RBP19.42■□□□□ 0.7
CD99-211ENST00000623253_PAR_Y A0A1W2PQY0 241 aa19.42■□□□□ 0.7
CD99-211ENST00000623253_PAR_Y ZNF865P0CJ78 1059 aaPredicted RBP19.42■□□□□ 0.7
CD99-211ENST00000623253_PAR_Y ITGB8P26012 769 aa19.42■□□□□ 0.7
CD99-211ENST00000623253_PAR_Y COPB2P35606 906 aa19.42■□□□□ 0.7
CD99-211ENST00000623253_PAR_Y SMAD3P84022 425 aaKnown RBP19.42■□□□□ 0.7
CD99-211ENST00000623253_PAR_Y MAFAQ8NHW3 353 aaPredicted RBP19.42■□□□□ 0.7
CD99-211ENST00000623253_PAR_Y MYLIPQ8WY64 445 aa19.42■□□□□ 0.7
CD99-211ENST00000623253_PAR_Y DDX11Q96FC9 970 aa19.42■□□□□ 0.7
CD99-211ENST00000623253_PAR_Y RNPC3Q96LT9 517 aaKnown RBP19.42■□□□□ 0.7
CD99-211ENST00000623253_PAR_Y MKNK2Q9HBH9 465 aa19.42■□□□□ 0.7
CD99-211ENST00000623253_PAR_Y TMEM39AQ9NV64 488 aa19.42■□□□□ 0.7
CD99-211ENST00000623253_PAR_Y ZNF214Q9UL59 606 aaPredicted RBP19.42■□□□□ 0.7
CD99-211ENST00000623253_PAR_Y BAZ2AQ9UIF9 1905 aaKnown RBP19.42■□□□□ 0.7
CD99-211ENST00000623253_PAR_Y SNRNP48Q6IEG0 339 aaKnown RBP19.41■□□□□ 0.7
CD99-211ENST00000623253_PAR_Y SLF1Q9BQI6 1058 aa19.41■□□□□ 0.7
CD99-211ENST00000623253_PAR_Y GNL3Q9BVP2 549 aaKnown RBP eCLIP19.41■□□□□ 0.7
CD99-211ENST00000623253_PAR_Y TTYH1Q9H313 450 aaPredicted RBP19.41■□□□□ 0.7
CD99-211ENST00000623253_PAR_Y ARPP21Q9UBL0 812 aaPredicted RBP19.41■□□□□ 0.7
CD99-211ENST00000623253_PAR_Y CTDP1Q9Y5B0 961 aaPredicted RBP19.41■□□□□ 0.7
CD99-211ENST00000623253_PAR_Y MINDY4BA8MYZ0 360 aa19.4■□□□□ 0.7
CD99-211ENST00000623253_PAR_Y SMARCA5O60264 1052 aaPredicted RBP19.4■□□□□ 0.7
CD99-211ENST00000623253_PAR_Y EPHB4P54760 987 aa19.4■□□□□ 0.7
CD99-211ENST00000623253_PAR_Y CPXCR1Q8N123 301 aa19.4■□□□□ 0.7
CD99-211ENST00000623253_PAR_Y REPS2Q8NFH8 660 aa19.4■□□□□ 0.7
CD99-211ENST00000623253_PAR_Y TEX13BQ9BXU2 312 aa19.4■□□□□ 0.7
CD99-211ENST00000623253_PAR_Y CHMP4BQ9H444 224 aaKnown RBP19.4■□□□□ 0.7
CD99-211ENST00000623253_PAR_Y STARD7Q9NQZ5 370 aa19.4■□□□□ 0.7
CD99-211ENST00000623253_PAR_Y ZHX1Q9UKY1 873 aaPredicted RBP19.4■□□□□ 0.7
CD99-211ENST00000623253_PAR_Y LAMA2P24043 3122 aaKnown RBP19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms