RNA–Protein interactions for RNA: ENST00000623253.4

CD99-211, Transcript of CD99 molecule (Xg blood group), humanhuman

TSL 1 (best)

Gene CD99, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD99-211ENST00000623253 USP17L12C9JPN9 530 aa19.5■□□□□ 0.71
CD99-211ENST00000623253 USP17L21D6R901 530 aa19.5■□□□□ 0.71
CD99-211ENST00000623253 WDR46O15213 610 aaKnown RBP19.5■□□□□ 0.71
CD99-211ENST00000623253 SLC25A27O95847 323 aa19.5■□□□□ 0.71
CD99-211ENST00000623253 PGK2P07205 417 aa19.5■□□□□ 0.71
CD99-211ENST00000623253 EEF2P13639 858 aaKnown RBP19.5■□□□□ 0.71
CD99-211ENST00000623253 ADD2P35612 726 aa19.5■□□□□ 0.71
CD99-211ENST00000623253 C12orf60Q5U649 245 aa19.5■□□□□ 0.71
CD99-211ENST00000623253 RPAP2Q8IXW5 612 aaPredicted RBP19.5■□□□□ 0.71
CD99-211ENST00000623253 XPNPEP3Q9NQH7 507 aa19.5■□□□□ 0.71
CD99-211ENST00000623253 ZNF236Q9UL36 1845 aa19.49■□□□□ 0.71
CD99-211ENST00000623253 MS4A1P11836 297 aa19.49■□□□□ 0.71
CD99-211ENST00000623253 KCTD2Q14681 263 aa19.49■□□□□ 0.71
CD99-211ENST00000623253 SH3RF1Q7Z6J0 888 aa19.49■□□□□ 0.71
CD99-211ENST00000623253 FBXO28Q9NVF7 368 aa19.49■□□□□ 0.71
CD99-211ENST00000623253 SLC4A4Q9Y6R1 1079 aa19.49■□□□□ 0.71
CD99-211ENST00000623253 DNAH12Q6ZR08 3092 aa19.49■□□□□ 0.71
CD99-211ENST00000623253 RAB11FIP3O75154 756 aa19.48■□□□□ 0.71
CD99-211ENST00000623253 CHGBP05060 677 aa19.48■□□□□ 0.71
CD99-211ENST00000623253 RARBP10826 455 aa19.48■□□□□ 0.71
CD99-211ENST00000623253 TLE2Q04725 743 aa19.48■□□□□ 0.71
CD99-211ENST00000623253 SNX17Q15036 470 aa19.48■□□□□ 0.71
CD99-211ENST00000623253 COL25A1Q9BXS0 654 aaPredicted RBP19.48■□□□□ 0.71
CD99-211ENST00000623253 KANSL2Q9H9L4 492 aa19.48■□□□□ 0.71
CD99-211ENST00000623253 PDLIM7Q9NR12 457 aa19.48■□□□□ 0.71
CD99-211ENST00000623253 COG6Q9Y2V7 657 aa19.48■□□□□ 0.71
CD99-211ENST00000623253 A0A0G2JMZ2 1700 aa19.48■□□□□ 0.71
CD99-211ENST00000623253 TRIM43BA6NCK2 446 aa19.47■□□□□ 0.71
CD99-211ENST00000623253 PGK1P00558 417 aa19.47■□□□□ 0.71
CD99-211ENST00000623253 ATP5JP18859 108 aa19.47■□□□□ 0.71
CD99-211ENST00000623253 STAT3P40763 770 aa19.47■□□□□ 0.71
CD99-211ENST00000623253 C16orf86Q6ZW13 317 aa19.47■□□□□ 0.71
CD99-211ENST00000623253 RIOX2Q8IUF8 465 aa19.47■□□□□ 0.71
CD99-211ENST00000623253 SIRT2Q8IXJ6 389 aa19.47■□□□□ 0.71
CD99-211ENST00000623253 TRIM43Q96BQ3 446 aaPredicted RBP19.47■□□□□ 0.71
CD99-211ENST00000623253 CDX2Q99626 313 aaPredicted RBP19.47■□□□□ 0.71
CD99-211ENST00000623253 GOPCQ9HD26 462 aa19.47■□□□□ 0.71
CD99-211ENST00000623253 VWA5AO00534 786 aa19.46■□□□□ 0.71
CD99-211ENST00000623253 TAL1P17542 331 aaPredicted RBP19.46■□□□□ 0.71
CD99-211ENST00000623253 FAM83BQ5T0W9 1011 aa19.46■□□□□ 0.71
CD99-211ENST00000623253 RNF180Q86T96 592 aa19.46■□□□□ 0.71
CD99-211ENST00000623253 HAUS7Q99871 368 aa19.46■□□□□ 0.71
CD99-211ENST00000623253 TINF2Q9BSI4 451 aa19.46■□□□□ 0.71
CD99-211ENST00000623253 SEMA6BQ9H3T3 888 aa19.46■□□□□ 0.71
CD99-211ENST00000623253 NRBP1Q9UHY1 535 aa19.46■□□□□ 0.71
CD99-211ENST00000623253 ADAMTS5Q9UNA0 930 aa19.46■□□□□ 0.71
CD99-211ENST00000623253 PHF24Q9UPV7 400 aa19.46■□□□□ 0.71
CD99-211ENST00000623253 RLFQ13129 1914 aa19.46■□□□□ 0.71
CD99-211ENST00000623253 SLC4A3P48751 1232 aa19.45■□□□□ 0.7
CD99-211ENST00000623253 UBE3CQ15386 1083 aa19.45■□□□□ 0.7
CD99-211ENST00000623253 C1orf53Q5VUE5 145 aa19.45■□□□□ 0.7
CD99-211ENST00000623253 CTR9Q6PD62 1173 aa19.45■□□□□ 0.7
CD99-211ENST00000623253 STK11IPQ8N1F8 1099 aa19.45■□□□□ 0.7
CD99-211ENST00000623253 PPP1R9AQ9ULJ8 1098 aa19.45■□□□□ 0.7
CD99-211ENST00000623253 DDX19BQ9UMR2 479 aa19.45■□□□□ 0.7
CD99-211ENST00000623253 TACC3Q9Y6A5 838 aa19.45■□□□□ 0.7
CD99-211ENST00000623253 LTBP2Q14767 1821 aa19.45■□□□□ 0.7
CD99-211ENST00000623253 PQBP1O60828 265 aaKnown RBP19.44■□□□□ 0.7
CD99-211ENST00000623253 CLTBP09497 229 aa19.44■□□□□ 0.7
CD99-211ENST00000623253 ZNF792Q3KQV3 632 aa19.44■□□□□ 0.7
CD99-211ENST00000623253 ZSCAN25Q6NSZ9 544 aa19.44■□□□□ 0.7
CD99-211ENST00000623253 ZBTB40Q9NUA8 1239 aa19.44■□□□□ 0.7
CD99-211ENST00000623253 CNPY2Q9Y2B0 182 aa19.44■□□□□ 0.7
CD99-211ENST00000623253 AKR1A1P14550 325 aa19.43■□□□□ 0.7
CD99-211ENST00000623253 RAG1P15918 1043 aa19.43■□□□□ 0.7
CD99-211ENST00000623253 LENG1Q96BZ8 264 aaPredicted RBP19.43■□□□□ 0.7
CD99-211ENST00000623253 NUP88Q99567 741 aaPredicted RBP19.43■□□□□ 0.7
CD99-211ENST00000623253 PUS7LQ9H0K6 701 aaKnown RBP19.43■□□□□ 0.7
CD99-211ENST00000623253 DIS3Q9Y2L1 958 aaKnown RBP19.43■□□□□ 0.7
CD99-211ENST00000623253 MYH8P13535 1937 aa19.43■□□□□ 0.7
CD99-211ENST00000623253 A0A1W2PQ45 241 aaPredicted RBP19.42■□□□□ 0.7
CD99-211ENST00000623253 A0A1W2PQY0 241 aa19.42■□□□□ 0.7
CD99-211ENST00000623253 ZNF865P0CJ78 1059 aaPredicted RBP19.42■□□□□ 0.7
CD99-211ENST00000623253 ITGB8P26012 769 aa19.42■□□□□ 0.7
CD99-211ENST00000623253 COPB2P35606 906 aa19.42■□□□□ 0.7
CD99-211ENST00000623253 SMAD3P84022 425 aaKnown RBP19.42■□□□□ 0.7
CD99-211ENST00000623253 MAFAQ8NHW3 353 aaPredicted RBP19.42■□□□□ 0.7
CD99-211ENST00000623253 MYLIPQ8WY64 445 aa19.42■□□□□ 0.7
CD99-211ENST00000623253 DDX11Q96FC9 970 aa19.42■□□□□ 0.7
CD99-211ENST00000623253 RNPC3Q96LT9 517 aaKnown RBP19.42■□□□□ 0.7
CD99-211ENST00000623253 MKNK2Q9HBH9 465 aa19.42■□□□□ 0.7
CD99-211ENST00000623253 TMEM39AQ9NV64 488 aa19.42■□□□□ 0.7
CD99-211ENST00000623253 ZNF214Q9UL59 606 aaPredicted RBP19.42■□□□□ 0.7
CD99-211ENST00000623253 BAZ2AQ9UIF9 1905 aaKnown RBP19.42■□□□□ 0.7
CD99-211ENST00000623253 SNRNP48Q6IEG0 339 aaKnown RBP19.41■□□□□ 0.7
CD99-211ENST00000623253 SLF1Q9BQI6 1058 aa19.41■□□□□ 0.7
CD99-211ENST00000623253 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.41■□□□□ 0.7
CD99-211ENST00000623253 TTYH1Q9H313 450 aaPredicted RBP19.41■□□□□ 0.7
CD99-211ENST00000623253 ARPP21Q9UBL0 812 aaPredicted RBP19.41■□□□□ 0.7
CD99-211ENST00000623253 CTDP1Q9Y5B0 961 aaPredicted RBP19.41■□□□□ 0.7
CD99-211ENST00000623253 MINDY4BA8MYZ0 360 aa19.4■□□□□ 0.7
CD99-211ENST00000623253 SMARCA5O60264 1052 aaPredicted RBP19.4■□□□□ 0.7
CD99-211ENST00000623253 EPHB4P54760 987 aa19.4■□□□□ 0.7
CD99-211ENST00000623253 CPXCR1Q8N123 301 aa19.4■□□□□ 0.7
CD99-211ENST00000623253 REPS2Q8NFH8 660 aa19.4■□□□□ 0.7
CD99-211ENST00000623253 TEX13BQ9BXU2 312 aa19.4■□□□□ 0.7
CD99-211ENST00000623253 CHMP4BQ9H444 224 aaKnown RBP19.4■□□□□ 0.7
CD99-211ENST00000623253 STARD7Q9NQZ5 370 aa19.4■□□□□ 0.7
CD99-211ENST00000623253 ZHX1Q9UKY1 873 aaPredicted RBP19.4■□□□□ 0.7
CD99-211ENST00000623253 LAMA2P24043 3122 aaKnown RBP19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms