RNA–Protein interactions for RNA: ENST00000622629.4

MSH6-215, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 4,324 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-215ENST00000622629 GTPBP6O43824 516 aaPredicted RBP14.38□□□□□ -0.11
MSH6-215ENST00000622629 TRIM37O94972 964 aa14.38□□□□□ -0.11
MSH6-215ENST00000622629 RPN1P04843 607 aaKnown RBP14.38□□□□□ -0.11
MSH6-215ENST00000622629 GABPB1Q06547 395 aaPredicted RBP14.38□□□□□ -0.11
MSH6-215ENST00000622629 CNNM4Q6P4Q7 775 aa14.38□□□□□ -0.11
MSH6-215ENST00000622629 SEPT12Q8IYM1 358 aa14.38□□□□□ -0.11
MSH6-215ENST00000622629 ERMNQ8TAM6 284 aa14.38□□□□□ -0.11
MSH6-215ENST00000622629 JAKMIP2Q96AA8 810 aa14.38□□□□□ -0.11
MSH6-215ENST00000622629 DYNLL2Q96FJ2 89 aa14.38□□□□□ -0.11
MSH6-215ENST00000622629 NAA15Q9BXJ9 866 aaKnown RBP14.38□□□□□ -0.11
MSH6-215ENST00000622629 MRPL12P52815 198 aaKnown RBP14.38□□□□□ -0.11
MSH6-215ENST00000622629 RBL2Q08999 1139 aa14.38□□□□□ -0.11
MSH6-215ENST00000622629 HDXQ7Z353 690 aa14.38□□□□□ -0.11
MSH6-215ENST00000622629 STAG1Q8WVM7 1258 aa14.38□□□□□ -0.11
MSH6-215ENST00000622629 APBA3O96018 575 aa14.38□□□□□ -0.11
MSH6-215ENST00000622629 DIXDC1Q155Q3 683 aa14.38□□□□□ -0.11
MSH6-215ENST00000622629 FBXO38Q6PIJ6 1188 aa14.38□□□□□ -0.11
MSH6-215ENST00000622629 NMT2O60551 498 aa14.37□□□□□ -0.11
MSH6-215ENST00000622629 PRDX5P30044 214 aa14.37□□□□□ -0.11
MSH6-215ENST00000622629 DNAJC21Q5F1R6 531 aaKnown RBP14.37□□□□□ -0.11
MSH6-215ENST00000622629 TAX1BP1Q86VP1 789 aa14.37□□□□□ -0.11
MSH6-215ENST00000622629 SYCP3Q8IZU3 236 aa14.37□□□□□ -0.11
MSH6-215ENST00000622629 SRP68Q9UHB9 627 aaKnown RBP14.37□□□□□ -0.11
MSH6-215ENST00000622629 SAMM50Q9Y512 469 aa14.37□□□□□ -0.11
MSH6-215ENST00000622629 SOWAHDA6NJG2 315 aa14.37□□□□□ -0.11
MSH6-215ENST00000622629 EFCAB8A8MWE9 144 aa14.37□□□□□ -0.11
MSH6-215ENST00000622629 CSF1RP07333 972 aa14.37□□□□□ -0.11
MSH6-215ENST00000622629 CYP2D6P10635 497 aa14.37□□□□□ -0.11
MSH6-215ENST00000622629 DPF2Q92785 391 aa14.37□□□□□ -0.11
MSH6-215ENST00000622629 SPDYE3A6NKU9 549 aa14.37□□□□□ -0.11
MSH6-215ENST00000622629 PRR29P0C7W0 189 aa14.37□□□□□ -0.11
MSH6-215ENST00000622629 RNASE9P60153 205 aaKnown RBP14.37□□□□□ -0.11
MSH6-215ENST00000622629 GTF2IP78347 998 aa14.37□□□□□ -0.11
MSH6-215ENST00000622629 MECOMQ03112 1051 aa14.37□□□□□ -0.11
MSH6-215ENST00000622629 CALCRLQ16602 461 aa14.37□□□□□ -0.11
MSH6-215ENST00000622629 SMIM5Q71RC9 77 aa14.37□□□□□ -0.11
MSH6-215ENST00000622629 FRMPD2Q68DX3 1309 aaPredicted RBP14.37□□□□□ -0.11
MSH6-215ENST00000622629 UBE2Q2LH0YL09 131 aa14.37□□□□□ -0.11
MSH6-215ENST00000622629 SEC31AO94979 1220 aaKnown RBP14.37□□□□□ -0.11
MSH6-215ENST00000622629 ARMCX5Q6P1M9 558 aa14.37□□□□□ -0.11
MSH6-215ENST00000622629 MAATS1Q7Z4T9 603 aa14.37□□□□□ -0.11
MSH6-215ENST00000622629 SGMS1Q86VZ5 419 aa14.37□□□□□ -0.11
MSH6-215ENST00000622629 GPR161Q8N6U8 529 aaKnown RBP14.37□□□□□ -0.11
MSH6-215ENST00000622629 ENAHQ8N8S7 591 aaPredicted RBP14.37□□□□□ -0.11
MSH6-215ENST00000622629 OSBPL5Q9H0X9 879 aaPredicted RBP14.37□□□□□ -0.11
MSH6-215ENST00000622629 SHTN1A0MZ66 631 aa14.36□□□□□ -0.11
MSH6-215ENST00000622629 OAS2P29728 719 aaKnown RBP14.36□□□□□ -0.11
MSH6-215ENST00000622629 COPB1P53618 953 aaKnown RBP14.36□□□□□ -0.11
MSH6-215ENST00000622629 RAPGEF1Q13905 1077 aa14.36□□□□□ -0.11
MSH6-215ENST00000622629 NELFCDQ8IXH7 590 aa14.36□□□□□ -0.11
MSH6-215ENST00000622629 ENGASEQ8NFI3 743 aa14.36□□□□□ -0.11
MSH6-215ENST00000622629 IGDCC4Q8TDY8 1250 aa14.36□□□□□ -0.11
MSH6-215ENST00000622629 PAGE5Q96GU1 130 aa14.36□□□□□ -0.11
MSH6-215ENST00000622629 FAM107BQ9H098 131 aa14.36□□□□□ -0.11
MSH6-215ENST00000622629 RSPH14Q9UHP6 348 aa14.36□□□□□ -0.11
MSH6-215ENST00000622629 HPS5Q9UPZ3 1129 aa14.36□□□□□ -0.11
MSH6-215ENST00000622629 PRPF3O43395 683 aaKnown RBP14.36□□□□□ -0.11
MSH6-215ENST00000622629 TCP10Q12799 353 aa14.36□□□□□ -0.11
MSH6-215ENST00000622629 LRRC47Q8N1G4 583 aaKnown RBP14.36□□□□□ -0.11
MSH6-215ENST00000622629 HINFPQ9BQA5 517 aa14.36□□□□□ -0.11
MSH6-215ENST00000622629 NLRC4Q9NPP4 1024 aa14.36□□□□□ -0.11
MSH6-215ENST00000622629 MEGF6O75095 1541 aa14.36□□□□□ -0.11
MSH6-215ENST00000622629 WDR19Q8NEZ3 1342 aa14.36□□□□□ -0.11
MSH6-215ENST00000622629 HERC4Q5GLZ8 1057 aaPredicted RBP14.36□□□□□ -0.11
MSH6-215ENST00000622629 CELF1Q92879 486 aaKnown RBP14.36□□□□□ -0.11
MSH6-215ENST00000622629 KDM6AO15550 1401 aaPredicted RBP14.35□□□□□ -0.11
MSH6-215ENST00000622629 SMC1AQ14683 1233 aaKnown RBP14.35□□□□□ -0.11
MSH6-215ENST00000622629 SLC39A2Q9NP94 309 aa14.35□□□□□ -0.11
MSH6-215ENST00000622629 USP17L3A6NCW0 530 aa14.35□□□□□ -0.11
MSH6-215ENST00000622629 USP17L4A6NCW7 530 aa14.35□□□□□ -0.11
MSH6-215ENST00000622629 H7C1D1 291 aa14.35□□□□□ -0.11
MSH6-215ENST00000622629 ADCY7P51828 1080 aa14.35□□□□□ -0.11
MSH6-215ENST00000622629 ALX1Q15699 326 aa14.35□□□□□ -0.11
MSH6-215ENST00000622629 DCAF17Q5H9S7 520 aaPredicted RBP14.35□□□□□ -0.11
MSH6-215ENST00000622629 TYW1BQ6NUM6 668 aa14.35□□□□□ -0.11
MSH6-215ENST00000622629 USP17L1Q7RTZ2 530 aa14.35□□□□□ -0.11
MSH6-215ENST00000622629 METTL16Q86W50 562 aaKnown RBP14.35□□□□□ -0.11
MSH6-215ENST00000622629 FCHSD1Q86WN1 690 aa14.35□□□□□ -0.11
MSH6-215ENST00000622629 GOPCQ9HD26 462 aa14.35□□□□□ -0.11
MSH6-215ENST00000622629 FAM205CA6NFA0 338 aa14.35□□□□□ -0.11
MSH6-215ENST00000622629 SSR1P43307 286 aaKnown RBP14.35□□□□□ -0.11
MSH6-215ENST00000622629 C2CD5Q86YS7 1000 aa14.35□□□□□ -0.11
MSH6-215ENST00000622629 SLC35F6Q8N357 371 aa14.35□□□□□ -0.11
MSH6-215ENST00000622629 IFT81Q8WYA0 676 aa14.35□□□□□ -0.11
MSH6-215ENST00000622629 CCDC51Q96ER9 411 aa14.35□□□□□ -0.11
MSH6-215ENST00000622629 KCNQ2O43526 872 aa14.34□□□□□ -0.11
MSH6-215ENST00000622629 OR52Z1P0C646 297 aa14.34□□□□□ -0.11
MSH6-215ENST00000622629 PCP11498 1178 aaKnown RBP14.34□□□□□ -0.11
MSH6-215ENST00000622629 BTDP43251 543 aa14.34□□□□□ -0.11
MSH6-215ENST00000622629 MAGEA1P43355 309 aa14.34□□□□□ -0.11
MSH6-215ENST00000622629 TUBB4BP68371 445 aa14.34□□□□□ -0.11
MSH6-215ENST00000622629 TMEM132AQ24JP5 1023 aa14.34□□□□□ -0.11
MSH6-215ENST00000622629 USP49Q70CQ1 688 aa14.34□□□□□ -0.11
MSH6-215ENST00000622629 ACRBPQ8NEB7 543 aa14.34□□□□□ -0.11
MSH6-215ENST00000622629 EPN1Q9Y6I3 576 aaPredicted RBP14.34□□□□□ -0.11
MSH6-215ENST00000622629 JCADQ9P266 1359 aa14.34□□□□□ -0.11
MSH6-215ENST00000622629 IFFO1Q0D2I5 559 aa14.34□□□□□ -0.11
MSH6-215ENST00000622629 TNIP1Q15025 636 aa14.34□□□□□ -0.11
MSH6-215ENST00000622629 CCDC65Q8IXS2 484 aa14.34□□□□□ -0.11
MSH6-215ENST00000622629 RBM17Q96I25 401 aaKnown RBP14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms