RNA–Protein interactions for RNA: ENST00000621093.4

POLR2J3-221, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene POLR2J3, Length 348 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-221ENST00000621093 INHBEP58166 350 aa12.8□□□□□ -0.36
POLR2J3-221ENST00000621093 FGD1P98174 961 aa12.8□□□□□ -0.36
POLR2J3-221ENST00000621093 CCDC96Q2M329 555 aa12.8□□□□□ -0.36
POLR2J3-221ENST00000621093 TTBK2Q6IQ55 1244 aa12.8□□□□□ -0.36
POLR2J3-221ENST00000621093 SAMD1Q6SPF0 538 aaPredicted RBP12.8□□□□□ -0.36
POLR2J3-221ENST00000621093 CATSPERGQ6ZRH7 1159 aa12.8□□□□□ -0.36
POLR2J3-221ENST00000621093 NOL8Q76FK4 1167 aaKnown RBP12.8□□□□□ -0.36
POLR2J3-221ENST00000621093 CCDC144CPQ8IYA2 1237 aa12.8□□□□□ -0.36
POLR2J3-221ENST00000621093 NUP133Q8WUM0 1156 aa12.8□□□□□ -0.36
POLR2J3-221ENST00000621093 LPAR1Q92633 364 aa12.8□□□□□ -0.36
POLR2J3-221ENST00000621093 AGXT2Q9BYV1 514 aa12.8□□□□□ -0.36
POLR2J3-221ENST00000621093 TANGO6Q9C0B7 1094 aa12.8□□□□□ -0.36
POLR2J3-221ENST00000621093 CPVLQ9H3G5 476 aa12.8□□□□□ -0.36
POLR2J3-221ENST00000621093 R3HDMLQ9H3Y0 253 aa12.8□□□□□ -0.36
POLR2J3-221ENST00000621093 GPCPD1Q9NPB8 672 aa12.8□□□□□ -0.36
POLR2J3-221ENST00000621093 ISY1Q9ULR0 285 aaKnown RBP12.8□□□□□ -0.36
POLR2J3-221ENST00000621093 SYNPO2Q9UMS6 1093 aa12.8□□□□□ -0.36
POLR2J3-221ENST00000621093 BAZ2BQ9UIF8 2168 aaKnown RBP12.8□□□□□ -0.36
POLR2J3-221ENST00000621093 MGAMO43451 1857 aa12.79□□□□□ -0.36
POLR2J3-221ENST00000621093 KLF18A0A0U1RQI7 1052 aa12.79□□□□□ -0.36
POLR2J3-221ENST00000621093 USP17L15C9J2P7 530 aa12.79□□□□□ -0.36
POLR2J3-221ENST00000621093 USP17L13C9JLJ4 530 aa12.79□□□□□ -0.36
POLR2J3-221ENST00000621093 USP17L11C9JVI0 530 aa12.79□□□□□ -0.36
POLR2J3-221ENST00000621093 USP17L18D6R9N7 530 aa12.79□□□□□ -0.36
POLR2J3-221ENST00000621093 USP17L22D6RA61 530 aa12.79□□□□□ -0.36
POLR2J3-221ENST00000621093 USP17L17D6RBQ6 530 aa12.79□□□□□ -0.36
POLR2J3-221ENST00000621093 USP17L19D6RCP7 530 aa12.79□□□□□ -0.36
POLR2J3-221ENST00000621093 USP17L20D6RJB6 530 aa12.79□□□□□ -0.36
POLR2J3-221ENST00000621093 SNHG28P0DPA3 235 aa12.79□□□□□ -0.36
POLR2J3-221ENST00000621093 SLC1A4P43007 532 aa12.79□□□□□ -0.36
POLR2J3-221ENST00000621093 AK2P54819 239 aa12.79□□□□□ -0.36
POLR2J3-221ENST00000621093 ZNF543Q08ER8 600 aa12.79□□□□□ -0.36
POLR2J3-221ENST00000621093 USP17L24Q0WX57 530 aa12.79□□□□□ -0.36
POLR2J3-221ENST00000621093 TROAPQ12815 778 aa12.79□□□□□ -0.36
POLR2J3-221ENST00000621093 POTEEQ6S8J3 1075 aa12.79□□□□□ -0.36
POLR2J3-221ENST00000621093 SGMS1Q86VZ5 419 aa12.79□□□□□ -0.36
POLR2J3-221ENST00000621093 STAG2Q8N3U4 1231 aa12.79□□□□□ -0.36
POLR2J3-221ENST00000621093 DCAF4Q8WV16 495 aa12.79□□□□□ -0.36
POLR2J3-221ENST00000621093 GMCL1Q96IK5 515 aa12.79□□□□□ -0.36
POLR2J3-221ENST00000621093 P2RX7Q99572 595 aaKnown RBP12.79□□□□□ -0.36
POLR2J3-221ENST00000621093 ASCC2Q9H1I8 757 aaPredicted RBP12.79□□□□□ -0.36
POLR2J3-221ENST00000621093 NAP1L2Q9ULW6 460 aaPredicted RBP12.79□□□□□ -0.36
POLR2J3-221ENST00000621093 TMEM232C9JQI7 657 aa12.78□□□□□ -0.36
POLR2J3-221ENST00000621093 HOXA7P31268 230 aaPredicted RBP12.78□□□□□ -0.36
POLR2J3-221ENST00000621093 SLC16A2P36021 539 aa12.78□□□□□ -0.36
POLR2J3-221ENST00000621093 GRM4Q14833 912 aa12.78□□□□□ -0.36
POLR2J3-221ENST00000621093 TAF1CQ15572 869 aaPredicted RBP12.78□□□□□ -0.36
POLR2J3-221ENST00000621093 APOA5Q6Q788 366 aa12.78□□□□□ -0.36
POLR2J3-221ENST00000621093 CATIPQ7Z7H3 387 aa12.78□□□□□ -0.36
POLR2J3-221ENST00000621093 MICU3Q86XE3 530 aa12.78□□□□□ -0.36
POLR2J3-221ENST00000621093 TMTC2Q8N394 836 aa12.78□□□□□ -0.36
POLR2J3-221ENST00000621093 FBXL16Q8N461 479 aa12.78□□□□□ -0.36
POLR2J3-221ENST00000621093 RNF186Q9NXI6 227 aa12.78□□□□□ -0.36
POLR2J3-221ENST00000621093 MAD2L2Q9UI95 211 aa12.78□□□□□ -0.36
POLR2J3-221ENST00000621093 SLC12A7Q9Y666 1083 aa12.78□□□□□ -0.36
POLR2J3-221ENST00000621093 TRPA1O75762 1119 aa12.77□□□□□ -0.37
POLR2J3-221ENST00000621093 FLOT1O75955 427 aa12.77□□□□□ -0.37
POLR2J3-221ENST00000621093 CD2BP2O95400 341 aaKnown RBP12.77□□□□□ -0.37
POLR2J3-221ENST00000621093 LARGE1O95461 756 aa12.77□□□□□ -0.37
POLR2J3-221ENST00000621093 TBC1D8O95759 1140 aa12.77□□□□□ -0.37
POLR2J3-221ENST00000621093 PARP1P09874 1014 aaKnown RBP12.77□□□□□ -0.37
POLR2J3-221ENST00000621093 OSBPP22059 807 aa12.77□□□□□ -0.37
POLR2J3-221ENST00000621093 SNAP25P60880 206 aa12.77□□□□□ -0.37
POLR2J3-221ENST00000621093 IRX3P78415 501 aaPredicted RBP12.77□□□□□ -0.37
POLR2J3-221ENST00000621093 CRHR2Q13324 411 aa12.77□□□□□ -0.37
POLR2J3-221ENST00000621093 SLC35G1Q2M3R5 365 aa12.77□□□□□ -0.37
POLR2J3-221ENST00000621093 REM2Q8IYK8 340 aaPredicted RBP12.77□□□□□ -0.37
POLR2J3-221ENST00000621093 ATG4CQ96DT6 458 aa12.77□□□□□ -0.37
POLR2J3-221ENST00000621093 UBA5Q9GZZ9 404 aa12.77□□□□□ -0.37
POLR2J3-221ENST00000621093 ALDH8A1Q9H2A2 487 aaPredicted RBP12.77□□□□□ -0.37
POLR2J3-221ENST00000621093 TSKSQ9UJT2 592 aa12.77□□□□□ -0.37
POLR2J3-221ENST00000621093 TPCN1Q9ULQ1 816 aa12.77□□□□□ -0.37
POLR2J3-221ENST00000621093 HPS5Q9UPZ3 1129 aa12.77□□□□□ -0.37
POLR2J3-221ENST00000621093 SLC45A1Q9Y2W3 748 aa12.77□□□□□ -0.37
POLR2J3-221ENST00000621093 ADGRA2Q96PE1 1338 aa12.77□□□□□ -0.37
POLR2J3-221ENST00000621093 PALM3A6NDB9 673 aaPredicted RBP12.76□□□□□ -0.37
POLR2J3-221ENST00000621093 SPDYE16A6NNV3 312 aaPredicted RBP12.76□□□□□ -0.37
POLR2J3-221ENST00000621093 GOLGA8BA8MQT2 603 aa12.76□□□□□ -0.37
POLR2J3-221ENST00000621093 ZBTB43O43298 467 aa12.76□□□□□ -0.37
POLR2J3-221ENST00000621093 DTNBO60941 627 aa12.76□□□□□ -0.37
POLR2J3-221ENST00000621093 DDAH1O94760 285 aa12.76□□□□□ -0.37
POLR2J3-221ENST00000621093 DSG3P32926 999 aa12.76□□□□□ -0.37
POLR2J3-221ENST00000621093 STK3Q13188 491 aa12.76□□□□□ -0.37
POLR2J3-221ENST00000621093 PABPC4Q13310 644 aaKnown RBP eCLIP12.76□□□□□ -0.37
POLR2J3-221ENST00000621093 COG2Q14746 738 aa12.76□□□□□ -0.37
POLR2J3-221ENST00000621093 RABEP1Q15276 862 aa12.76□□□□□ -0.37
POLR2J3-221ENST00000621093 OTUD7BQ6GQQ9 843 aa12.76□□□□□ -0.37
POLR2J3-221ENST00000621093 NBPF11Q86T75 865 aa12.76□□□□□ -0.37
POLR2J3-221ENST00000621093 CMTR1Q8N1G2 835 aaKnown RBP12.76□□□□□ -0.37
POLR2J3-221ENST00000621093 KIFC2Q96AC6 838 aa12.76□□□□□ -0.37
POLR2J3-221ENST00000621093 SLF1Q9BQI6 1058 aa12.76□□□□□ -0.37
POLR2J3-221ENST00000621093 FAM217BQ9NTX9 383 aaPredicted RBP12.76□□□□□ -0.37
POLR2J3-221ENST00000621093 CPA4Q9UI42 421 aa12.76□□□□□ -0.37
POLR2J3-221ENST00000621093 FEM1BQ9UK73 627 aa12.76□□□□□ -0.37
POLR2J3-221ENST00000621093 GOLGA8AA7E2F4 631 aa12.75□□□□□ -0.37
POLR2J3-221ENST00000621093 CA12O43570 354 aa12.75□□□□□ -0.37
POLR2J3-221ENST00000621093 CNMDO75829 334 aa12.75□□□□□ -0.37
POLR2J3-221ENST00000621093 PLEKHA8P1O95397 391 aa12.75□□□□□ -0.37
POLR2J3-221ENST00000621093 TAL1P17542 331 aaPredicted RBP12.75□□□□□ -0.37
POLR2J3-221ENST00000621093 PDIA3P30101 505 aaKnown RBP12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms