RNA–Protein interactions for RNA: ENST00000620675.4

NEK3-210, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-210ENST00000620675 NFXL1Q6ZNB6 911 aa15.98■□□□□ 0.15
NEK3-210ENST00000620675 ZNF654Q8IZM8 581 aa15.98■□□□□ 0.15
NEK3-210ENST00000620675 STAG2Q8N3U4 1231 aa15.98■□□□□ 0.15
NEK3-210ENST00000620675 R3HDMLQ9H3Y0 253 aa15.98■□□□□ 0.15
NEK3-210ENST00000620675 SH2D4AQ9H788 454 aa15.98■□□□□ 0.15
NEK3-210ENST00000620675 AGTPBP1Q9UPW5 1226 aa15.98■□□□□ 0.15
NEK3-210ENST00000620675 PDHXO00330 501 aa15.97■□□□□ 0.15
NEK3-210ENST00000620675 FGD1P98174 961 aa15.97■□□□□ 0.15
NEK3-210ENST00000620675 CCDC178Q5BJE1 867 aa15.97■□□□□ 0.15
NEK3-210ENST00000620675 SGMS1Q86VZ5 419 aa15.97■□□□□ 0.15
NEK3-210ENST00000620675 GPCPD1Q9NPB8 672 aa15.97■□□□□ 0.15
NEK3-210ENST00000620675 KLF18A0A0U1RQI7 1052 aa15.96■□□□□ 0.15
NEK3-210ENST00000620675 SNHG28P0DPA3 235 aa15.96■□□□□ 0.15
NEK3-210ENST00000620675 SLC35G1Q2M3R5 365 aa15.96■□□□□ 0.15
NEK3-210ENST00000620675 APOA5Q6Q788 366 aa15.96■□□□□ 0.15
NEK3-210ENST00000620675 FASTKD5Q7L8L6 764 aaKnown RBP15.96■□□□□ 0.15
NEK3-210ENST00000620675 NUP133Q8WUM0 1156 aa15.96■□□□□ 0.15
NEK3-210ENST00000620675 MTA3Q9BTC8 594 aa15.96■□□□□ 0.15
NEK3-210ENST00000620675 TANGO6Q9C0B7 1094 aa15.96■□□□□ 0.15
NEK3-210ENST00000620675 ISY1Q9ULR0 285 aaKnown RBP15.96■□□□□ 0.15
NEK3-210ENST00000620675 ZSWIM8A7E2V4 1837 aa15.96■□□□□ 0.15
NEK3-210ENST00000620675 HTTP42858 3142 aa15.96■□□□□ 0.15
NEK3-210ENST00000620675 CCDC69A6NI79 296 aa15.96■□□□□ 0.15
NEK3-210ENST00000620675 LARGE1O95461 756 aa15.96■□□□□ 0.15
NEK3-210ENST00000620675 BMP3P12645 472 aa15.96■□□□□ 0.15
NEK3-210ENST00000620675 SLC16A2P36021 539 aa15.96■□□□□ 0.15
NEK3-210ENST00000620675 MAP2K2P36507 400 aa15.96■□□□□ 0.15
NEK3-210ENST00000620675 SLC1A4P43007 532 aa15.96■□□□□ 0.15
NEK3-210ENST00000620675 CATSPERGQ6ZRH7 1159 aa15.96■□□□□ 0.15
NEK3-210ENST00000620675 MICU3Q86XE3 530 aa15.96■□□□□ 0.15
NEK3-210ENST00000620675 LPAR1Q92633 364 aa15.96■□□□□ 0.15
NEK3-210ENST00000620675 ASCC2Q9H1I8 757 aaPredicted RBP15.96■□□□□ 0.15
NEK3-210ENST00000620675 WDR46O15213 610 aaKnown RBP15.95■□□□□ 0.14
NEK3-210ENST00000620675 SREBF2Q12772 1141 aa15.95■□□□□ 0.14
NEK3-210ENST00000620675 CCDC96Q2M329 555 aa15.95■□□□□ 0.14
NEK3-210ENST00000620675 PPP4R3BQ5MIZ7 849 aa15.95■□□□□ 0.14
NEK3-210ENST00000620675 ANKRD23Q86SG2 305 aa15.95■□□□□ 0.14
NEK3-210ENST00000620675 NBPF11Q86T75 865 aa15.95■□□□□ 0.14
NEK3-210ENST00000620675 CMTR1Q8N1G2 835 aaKnown RBP15.95■□□□□ 0.14
NEK3-210ENST00000620675 GMCL1Q96IK5 515 aa15.95■□□□□ 0.14
NEK3-210ENST00000620675 P2RX7Q99572 595 aaKnown RBP15.95■□□□□ 0.14
NEK3-210ENST00000620675 MAD2L2Q9UI95 211 aa15.95■□□□□ 0.14
NEK3-210ENST00000620675 NAP1L2Q9ULW6 460 aaPredicted RBP15.95■□□□□ 0.14
NEK3-210ENST00000620675 SYNPO2Q9UMS6 1093 aa15.95■□□□□ 0.14
NEK3-210ENST00000620675 HPS5Q9UPZ3 1129 aa15.95■□□□□ 0.14
NEK3-210ENST00000620675 TMEM232C9JQI7 657 aa15.95■□□□□ 0.14
NEK3-210ENST00000620675 SNAP25P60880 206 aa15.95■□□□□ 0.14
NEK3-210ENST00000620675 ZNF543Q08ER8 600 aa15.95■□□□□ 0.14
NEK3-210ENST00000620675 CATIPQ7Z7H3 387 aa15.95■□□□□ 0.14
NEK3-210ENST00000620675 FBXL16Q8N461 479 aa15.95■□□□□ 0.14
NEK3-210ENST00000620675 UBA5Q9GZZ9 404 aa15.95■□□□□ 0.14
NEK3-210ENST00000620675 TPCN1Q9ULQ1 816 aa15.95■□□□□ 0.14
NEK3-210ENST00000620675 A0A0G2JMZ2 1700 aa15.94■□□□□ 0.14
NEK3-210ENST00000620675 FLOT1O75955 427 aa15.94■□□□□ 0.14
NEK3-210ENST00000620675 HOXA7P31268 230 aaPredicted RBP15.94■□□□□ 0.14
NEK3-210ENST00000620675 FAM217BQ9NTX9 383 aaPredicted RBP15.94■□□□□ 0.14
NEK3-210ENST00000620675 TSKSQ9UJT2 592 aa15.94■□□□□ 0.14
NEK3-210ENST00000620675 SLC12A7Q9Y666 1083 aa15.94■□□□□ 0.14
NEK3-210ENST00000620675 CASP8AP2Q9UKL3 1982 aa15.93■□□□□ 0.14
NEK3-210ENST00000620675 USP17L15C9J2P7 530 aa15.93■□□□□ 0.14
NEK3-210ENST00000620675 USP17L13C9JLJ4 530 aa15.93■□□□□ 0.14
NEK3-210ENST00000620675 USP17L11C9JVI0 530 aa15.93■□□□□ 0.14
NEK3-210ENST00000620675 USP17L18D6R9N7 530 aa15.93■□□□□ 0.14
NEK3-210ENST00000620675 USP17L22D6RA61 530 aa15.93■□□□□ 0.14
NEK3-210ENST00000620675 USP17L17D6RBQ6 530 aa15.93■□□□□ 0.14
NEK3-210ENST00000620675 USP17L19D6RCP7 530 aa15.93■□□□□ 0.14
NEK3-210ENST00000620675 USP17L20D6RJB6 530 aa15.93■□□□□ 0.14
NEK3-210ENST00000620675 PPFIA3O75145 1194 aa15.93■□□□□ 0.14
NEK3-210ENST00000620675 TRPA1O75762 1119 aa15.93■□□□□ 0.14
NEK3-210ENST00000620675 CDC27P30260 824 aa15.93■□□□□ 0.14
NEK3-210ENST00000620675 INHBEP58166 350 aa15.93■□□□□ 0.14
NEK3-210ENST00000620675 USP17L24Q0WX57 530 aa15.93■□□□□ 0.14
NEK3-210ENST00000620675 STK3Q13188 491 aa15.93■□□□□ 0.14
NEK3-210ENST00000620675 GRM4Q14833 912 aa15.93■□□□□ 0.14
NEK3-210ENST00000620675 RABEP1Q15276 862 aa15.93■□□□□ 0.14
NEK3-210ENST00000620675 DCAF4Q8WV16 495 aa15.93■□□□□ 0.14
NEK3-210ENST00000620675 ATG4CQ96DT6 458 aa15.93■□□□□ 0.14
NEK3-210ENST00000620675 NCOA5Q9HCD5 579 aaKnown RBP15.93■□□□□ 0.14
NEK3-210ENST00000620675 SPDYE16A6NNV3 312 aaPredicted RBP15.93■□□□□ 0.14
NEK3-210ENST00000620675 GOLGA8BA8MQT2 603 aa15.93■□□□□ 0.14
NEK3-210ENST00000620675 PLEKHA8P1O95397 391 aa15.93■□□□□ 0.14
NEK3-210ENST00000620675 TAL1P17542 331 aaPredicted RBP15.93■□□□□ 0.14
NEK3-210ENST00000620675 PDIA3P30101 505 aaKnown RBP15.93■□□□□ 0.14
NEK3-210ENST00000620675 CRHR2Q13324 411 aa15.93■□□□□ 0.14
NEK3-210ENST00000620675 TAF1CQ15572 869 aaPredicted RBP15.93■□□□□ 0.14
NEK3-210ENST00000620675 TMTC2Q8N394 836 aa15.93■□□□□ 0.14
NEK3-210ENST00000620675 RNF186Q9NXI6 227 aa15.93■□□□□ 0.14
NEK3-210ENST00000620675 PALM3A6NDB9 673 aaPredicted RBP15.92■□□□□ 0.14
NEK3-210ENST00000620675 ZBTB43O43298 467 aa15.92■□□□□ 0.14
NEK3-210ENST00000620675 TBC1D8O95759 1140 aa15.92■□□□□ 0.14
NEK3-210ENST00000620675 EVCP57679 992 aa15.92■□□□□ 0.14
NEK3-210ENST00000620675 CCT2P78371 535 aaKnown RBP15.92■□□□□ 0.14
NEK3-210ENST00000620675 IRX3P78415 501 aaPredicted RBP15.92■□□□□ 0.14
NEK3-210ENST00000620675 KIFC2Q96AC6 838 aa15.92■□□□□ 0.14
NEK3-210ENST00000620675 ALDH8A1Q9H2A2 487 aaPredicted RBP15.92■□□□□ 0.14
NEK3-210ENST00000620675 TXNRD2Q9NNW7 524 aa15.92■□□□□ 0.14
NEK3-210ENST00000620675 CYTH3O43739 400 aa15.91■□□□□ 0.14
NEK3-210ENST00000620675 DDAH1O94760 285 aa15.91■□□□□ 0.14
NEK3-210ENST00000620675 PARP1P09874 1014 aaKnown RBP15.91■□□□□ 0.14
NEK3-210ENST00000620675 ADD1P35611 737 aaKnown RBP15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms