RNA–Protein interactions for RNA: ENST00000619300.4

PSPC1-206, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PSPC1, Length 2,013 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-206ENST00000619300 ZRSR1Q15695 479 aaKnown RBP21.8■■□□□ 1.08
PSPC1-206ENST00000619300 LONRF3Q496Y0 759 aa21.8■■□□□ 1.08
PSPC1-206ENST00000619300 TYW1BQ6NUM6 668 aa21.8■■□□□ 1.08
PSPC1-206ENST00000619300 CCDC148Q8NFR7 591 aa21.8■■□□□ 1.08
PSPC1-206ENST00000619300 A0A087WWV3 80 aa21.79■■□□□ 1.08
PSPC1-206ENST00000619300 STXBP3O00186 592 aa21.79■■□□□ 1.08
PSPC1-206ENST00000619300 WNT7AO00755 349 aa21.79■■□□□ 1.08
PSPC1-206ENST00000619300 ADAMTS3O15072 1205 aa21.79■■□□□ 1.08
PSPC1-206ENST00000619300 PTMAP06454 111 aaKnown RBP21.79■■□□□ 1.08
PSPC1-206ENST00000619300 PDHBP11177 359 aa21.79■■□□□ 1.08
PSPC1-206ENST00000619300 ZNF174Q15697 407 aa21.79■■□□□ 1.08
PSPC1-206ENST00000619300 HEATR3Q7Z4Q2 680 aa21.79■■□□□ 1.08
PSPC1-206ENST00000619300 ELOA2Q8IYF1 753 aaPredicted RBP21.79■■□□□ 1.08
PSPC1-206ENST00000619300 CCDC17Q96LX7 622 aa21.79■■□□□ 1.08
PSPC1-206ENST00000619300 NAT10Q9H0A0 1025 aaKnown RBP21.79■■□□□ 1.08
PSPC1-206ENST00000619300 PI4KBQ9UBF8 816 aa21.79■■□□□ 1.08
PSPC1-206ENST00000619300 CLIP2Q9UDT6 1046 aa21.79■■□□□ 1.08
PSPC1-206ENST00000619300 KRBA2Q6ZNG9 492 aa21.79■■□□□ 1.08
PSPC1-206ENST00000619300 CEP57L1Q8IYX8 460 aa21.79■■□□□ 1.08
PSPC1-206ENST00000619300 FERMT2Q96AC1 680 aa21.79■■□□□ 1.08
PSPC1-206ENST00000619300 RRP36Q96EU6 259 aaKnown RBP21.79■■□□□ 1.08
PSPC1-206ENST00000619300 CSRNP2Q9H175 543 aa21.79■■□□□ 1.08
PSPC1-206ENST00000619300 CPVLQ9H3G5 476 aa21.79■■□□□ 1.08
PSPC1-206ENST00000619300 M0R2N6 131 aa21.78■■□□□ 1.08
PSPC1-206ENST00000619300 DAGLBQ8NCG7 672 aa21.78■■□□□ 1.08
PSPC1-206ENST00000619300 CNNM3Q8NE01 707 aa21.78■■□□□ 1.08
PSPC1-206ENST00000619300 DDTLA6NHG4 134 aaPredicted RBP21.77■■□□□ 1.08
PSPC1-206ENST00000619300 SNHG28P0DPA3 235 aa21.77■■□□□ 1.08
PSPC1-206ENST00000619300 EIF6P56537 245 aaKnown RBP21.77■■□□□ 1.08
PSPC1-206ENST00000619300 CFAP100Q494V2 611 aa21.77■■□□□ 1.08
PSPC1-206ENST00000619300 GOLGA6L19H0YKK7 550 aa21.77■■□□□ 1.07
PSPC1-206ENST00000619300 NLRP12P59046 1061 aa21.77■■□□□ 1.07
PSPC1-206ENST00000619300 ASPRV1Q53RT3 343 aa21.77■■□□□ 1.07
PSPC1-206ENST00000619300 LRRC47Q8N1G4 583 aaKnown RBP21.77■■□□□ 1.07
PSPC1-206ENST00000619300 RIOX1Q9H6W3 641 aa21.77■■□□□ 1.07
PSPC1-206ENST00000619300 TUBE1Q9UJT0 475 aa21.77■■□□□ 1.07
PSPC1-206ENST00000619300 MPHOSPH10O00566 681 aaKnown RBP21.76■■□□□ 1.07
PSPC1-206ENST00000619300 PTGDRQ13258 359 aa21.76■■□□□ 1.07
PSPC1-206ENST00000619300 PPP4R3BQ5MIZ7 849 aa21.76■■□□□ 1.07
PSPC1-206ENST00000619300 SH3BP5LQ7L8J4 393 aa21.76■■□□□ 1.07
PSPC1-206ENST00000619300 ZSCAN29Q8IWY8 852 aaPredicted RBP21.76■■□□□ 1.07
PSPC1-206ENST00000619300 TDRD3Q9H7E2 651 aaKnown RBP21.76■■□□□ 1.07
PSPC1-206ENST00000619300 DNAJC18Q9H819 358 aa21.76■■□□□ 1.07
PSPC1-206ENST00000619300 VAT1LQ9HCJ6 419 aa21.76■■□□□ 1.07
PSPC1-206ENST00000619300 SEC63Q9UGP8 760 aaKnown RBP21.76■■□□□ 1.07
PSPC1-206ENST00000619300 ZNF646O15015 1829 aaPredicted RBP21.76■■□□□ 1.07
PSPC1-206ENST00000619300 BECN2A8MW95 431 aa21.75■■□□□ 1.07
PSPC1-206ENST00000619300 POLR2DO15514 142 aaKnown RBP21.75■■□□□ 1.07
PSPC1-206ENST00000619300 CLCN1P35523 988 aa21.75■■□□□ 1.07
PSPC1-206ENST00000619300 ATP2C1P98194 919 aaPredicted RBP21.75■■□□□ 1.07
PSPC1-206ENST00000619300 METTL16Q86W50 562 aaKnown RBP21.75■■□□□ 1.07
PSPC1-206ENST00000619300 CLEC10AQ8IUN9 316 aa21.75■■□□□ 1.07
PSPC1-206ENST00000619300 FOXP4Q8IVH2 680 aaPredicted RBP21.75■■□□□ 1.07
PSPC1-206ENST00000619300 DHX40Q8IX18 779 aaKnown RBP21.75■■□□□ 1.07
PSPC1-206ENST00000619300 LARGE2Q8N3Y3 721 aa21.75■■□□□ 1.07
PSPC1-206ENST00000619300 CCDC12Q8WUD4 166 aaPredicted RBP21.75■■□□□ 1.07
PSPC1-206ENST00000619300 PRMT6Q96LA8 375 aaPredicted RBP21.75■■□□□ 1.07
PSPC1-206ENST00000619300 UBA5Q9GZZ9 404 aa21.75■■□□□ 1.07
PSPC1-206ENST00000619300 ZMYND12Q9H0C1 365 aa21.75■■□□□ 1.07
PSPC1-206ENST00000619300 HOOK1Q9UJC3 728 aaKnown RBP21.75■■□□□ 1.07
PSPC1-206ENST00000619300 PCDHA6Q9UN73 950 aa21.75■■□□□ 1.07
PSPC1-206ENST00000619300 PCDHA8Q9Y5H6 950 aa21.75■■□□□ 1.07
PSPC1-206ENST00000619300 SLURP2P0DP57 97 aa21.75■■□□□ 1.07
PSPC1-206ENST00000619300 DPCR1Q3MIW9 517 aa21.75■■□□□ 1.07
PSPC1-206ENST00000619300 RSBN1LQ6PCB5 846 aaPredicted RBP21.75■■□□□ 1.07
PSPC1-206ENST00000619300 VPS33BQ9H267 617 aa21.75■■□□□ 1.07
PSPC1-206ENST00000619300 ZNF277Q9NRM2 450 aaPredicted RBP21.75■■□□□ 1.07
PSPC1-206ENST00000619300 FRMPD2Q68DX3 1309 aaPredicted RBP21.74■■□□□ 1.07
PSPC1-206ENST00000619300 CCDC194A0A1B0GVG4 234 aa21.74■■□□□ 1.07
PSPC1-206ENST00000619300 BIN1O00499 593 aa21.74■■□□□ 1.07
PSPC1-206ENST00000619300 MSNP26038 577 aaKnown RBP21.74■■□□□ 1.07
PSPC1-206ENST00000619300 MDM2Q00987 491 aaPredicted RBP21.74■■□□□ 1.07
PSPC1-206ENST00000619300 PNOCQ13519 176 aa21.74■■□□□ 1.07
PSPC1-206ENST00000619300 USP49Q70CQ1 688 aa21.74■■□□□ 1.07
PSPC1-206ENST00000619300 HOMER1Q86YM7 354 aa21.74■■□□□ 1.07
PSPC1-206ENST00000619300 PIGSQ96S52 555 aa21.74■■□□□ 1.07
PSPC1-206ENST00000619300 BPIFA3Q9BQP9 254 aa21.74■■□□□ 1.07
PSPC1-206ENST00000619300 ENTPD3O75355 529 aa21.73■■□□□ 1.07
PSPC1-206ENST00000619300 VIL1P09327 827 aaKnown RBP21.73■■□□□ 1.07
PSPC1-206ENST00000619300 MCM7P33993 719 aa21.73■■□□□ 1.07
PSPC1-206ENST00000619300 NAPAP54920 295 aa21.73■■□□□ 1.07
PSPC1-206ENST00000619300 CERKLQ49MI3 558 aaPredicted RBP21.73■■□□□ 1.07
PSPC1-206ENST00000619300 RASGRP4Q8TDF6 673 aa21.73■■□□□ 1.07
PSPC1-206ENST00000619300 EIF2AK3Q9NZJ5 1116 aaKnown RBP21.73■■□□□ 1.07
PSPC1-206ENST00000619300 ZKSCAN5Q9Y2L8 839 aa21.73■■□□□ 1.07
PSPC1-206ENST00000619300 RAD17O75943 681 aa21.73■■□□□ 1.07
PSPC1-206ENST00000619300 TATDN1Q6P1N9 297 aa21.73■■□□□ 1.07
PSPC1-206ENST00000619300 TRIM34Q9BYJ4 488 aa21.73■■□□□ 1.07
PSPC1-206ENST00000619300 ZNF543Q08ER8 600 aa21.72■■□□□ 1.07
PSPC1-206ENST00000619300 SOGA3Q5TF21 947 aa21.72■■□□□ 1.07
PSPC1-206ENST00000619300 EPSTI1Q96J88 318 aa21.72■■□□□ 1.07
PSPC1-206ENST00000619300 TRIM5Q9C035 493 aa21.72■■□□□ 1.07
PSPC1-206ENST00000619300 C6orf50Q9HD87 102 aa21.72■■□□□ 1.07
PSPC1-206ENST00000619300 SERTAD1Q9UHV2 236 aa21.72■■□□□ 1.07
PSPC1-206ENST00000619300 SMCO2A6NFE2 343 aa21.72■■□□□ 1.07
PSPC1-206ENST00000619300 FAM196BA6NMK8 535 aa21.72■■□□□ 1.07
PSPC1-206ENST00000619300 PSMD14O00487 310 aa21.72■■□□□ 1.07
PSPC1-206ENST00000619300 GNA11P29992 359 aa21.72■■□□□ 1.07
PSPC1-206ENST00000619300 TGFB2P61812 414 aa21.72■■□□□ 1.07
PSPC1-206ENST00000619300 ATP2B2Q01814 1243 aa21.72■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms