RNA–Protein interactions for RNA: ENST00000618834.1

PCDHA4-204, Transcript of protocadherin alpha 4, humanhuman

BASIC

Gene PCDHA4, Length 10,557 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-204ENST00000618834 ZNF277Q9NRM2 450 aaPredicted RBP12.6□□□□□ -0.39
PCDHA4-204ENST00000618834 POLKQ9UBT6 870 aa12.6□□□□□ -0.39
PCDHA4-204ENST00000618834 GNGT2O14610 69 aa12.6□□□□□ -0.39
PCDHA4-204ENST00000618834 XAGE3Q8WTP9 111 aa12.6□□□□□ -0.39
PCDHA4-204ENST00000618834 KIFC3Q9BVG8 833 aa12.6□□□□□ -0.39
PCDHA4-204ENST00000618834 MAD1L1Q9Y6D9 718 aa12.6□□□□□ -0.39
PCDHA4-204ENST00000618834 RFC4P35249 363 aa12.6□□□□□ -0.39
PCDHA4-204ENST00000618834 ZC3H18Q86VM9 953 aaKnown RBP12.6□□□□□ -0.39
PCDHA4-204ENST00000618834 RINT1Q6NUQ1 792 aa12.6□□□□□ -0.39
PCDHA4-204ENST00000618834 ARMC9Q7Z3E5 817 aa12.6□□□□□ -0.39
PCDHA4-204ENST00000618834 PACSIN2Q9UNF0 486 aaPredicted RBP12.6□□□□□ -0.39
PCDHA4-204ENST00000618834 SLC27A2O14975 620 aa12.6□□□□□ -0.39
PCDHA4-204ENST00000618834 KRT80Q6KB66 452 aa12.6□□□□□ -0.39
PCDHA4-204ENST00000618834 LZTS2Q9BRK4 669 aa12.6□□□□□ -0.39
PCDHA4-204ENST00000618834 ZNF215Q9UL58 517 aaPredicted RBP12.6□□□□□ -0.39
PCDHA4-204ENST00000618834 JRKLQ9Y4A0 524 aa12.6□□□□□ -0.39
PCDHA4-204ENST00000618834 GADD45BO75293 160 aaPredicted RBP12.59□□□□□ -0.39
PCDHA4-204ENST00000618834 EIF3CLB5ME19 914 aaKnown RBP12.59□□□□□ -0.39
PCDHA4-204ENST00000618834 KCTD16Q68DU8 428 aa12.59□□□□□ -0.39
PCDHA4-204ENST00000618834 EIF3CQ99613 913 aaKnown RBP12.59□□□□□ -0.39
PCDHA4-204ENST00000618834 INTS9Q9NV88 658 aaKnown RBP12.59□□□□□ -0.39
PCDHA4-204ENST00000618834 RPRD2Q5VT52 1461 aaKnown RBP12.59□□□□□ -0.39
PCDHA4-204ENST00000618834 XRCC5P13010 732 aaKnown RBP12.59□□□□□ -0.39
PCDHA4-204ENST00000618834 ASPHQ12797 758 aa12.59□□□□□ -0.39
PCDHA4-204ENST00000618834 INTUQ9ULD6 942 aa12.59□□□□□ -0.39
PCDHA4-204ENST00000618834 LDHBP07195 334 aaKnown RBP12.59□□□□□ -0.39
PCDHA4-204ENST00000618834 ACTR5Q9H9F9 607 aaPredicted RBP12.59□□□□□ -0.39
PCDHA4-204ENST00000618834 SPC25Q9HBM1 224 aa12.59□□□□□ -0.39
PCDHA4-204ENST00000618834 DNM3Q9UQ16 869 aa12.59□□□□□ -0.39
PCDHA4-204ENST00000618834 C16orf71Q8IYS4 520 aaPredicted RBP12.59□□□□□ -0.39
PCDHA4-204ENST00000618834 CEP70Q8NHQ1 597 aa12.59□□□□□ -0.39
PCDHA4-204ENST00000618834 TEKT1Q969V4 418 aa12.59□□□□□ -0.39
PCDHA4-204ENST00000618834 KDM3AQ9Y4C1 1321 aa12.59□□□□□ -0.39
PCDHA4-204ENST00000618834 EXOC3O60645 756 aa12.59□□□□□ -0.39
PCDHA4-204ENST00000618834 LMNB1P20700 586 aa12.59□□□□□ -0.39
PCDHA4-204ENST00000618834 RAB44Q7Z6P3 723 aaPredicted RBP12.59□□□□□ -0.39
PCDHA4-204ENST00000618834 TRIM15Q9C019 465 aa12.59□□□□□ -0.39
PCDHA4-204ENST00000618834 TMOD4Q9NZQ9 345 aa12.59□□□□□ -0.39
PCDHA4-204ENST00000618834 ZBTB12Q9Y330 459 aaPredicted RBP12.59□□□□□ -0.39
PCDHA4-204ENST00000618834 GUCY2DQ02846 1103 aa12.59□□□□□ -0.39
PCDHA4-204ENST00000618834 TFCP2Q12800 502 aa12.59□□□□□ -0.39
PCDHA4-204ENST00000618834 TMEM87BQ96K49 555 aa12.59□□□□□ -0.39
PCDHA4-204ENST00000618834 SATB2Q9UPW6 733 aa12.59□□□□□ -0.39
PCDHA4-204ENST00000618834 GOLGA8CPA6NN73 597 aa12.58□□□□□ -0.39
PCDHA4-204ENST00000618834 CDC37L1Q7L3B6 337 aa12.58□□□□□ -0.4
PCDHA4-204ENST00000618834 TUBB6Q9BUF5 446 aa12.58□□□□□ -0.4
PCDHA4-204ENST00000618834 GPIHBP1Q8IV16 184 aa12.58□□□□□ -0.4
PCDHA4-204ENST00000618834 POLR3CQ9BUI4 534 aaPredicted RBP12.58□□□□□ -0.4
PCDHA4-204ENST00000618834 TCHHQ07283 1943 aa12.58□□□□□ -0.4
PCDHA4-204ENST00000618834 PSDA5PKW4 1024 aaPredicted RBP12.58□□□□□ -0.4
PCDHA4-204ENST00000618834 TEX11Q8IYF3 940 aa12.58□□□□□ -0.4
PCDHA4-204ENST00000618834 SETDB2Q96T68 719 aa12.58□□□□□ -0.4
PCDHA4-204ENST00000618834 SH2D4AQ9H788 454 aa12.58□□□□□ -0.4
PCDHA4-204ENST00000618834 A0A087WUV0 522 aaPredicted RBP12.58□□□□□ -0.4
PCDHA4-204ENST00000618834 CDC25BP30305 580 aa12.58□□□□□ -0.4
PCDHA4-204ENST00000618834 KSR2Q6VAB6 950 aa12.58□□□□□ -0.4
PCDHA4-204ENST00000618834 NME8Q8N427 588 aa12.58□□□□□ -0.4
PCDHA4-204ENST00000618834 OR8K1Q8NGG5 319 aa12.58□□□□□ -0.4
PCDHA4-204ENST00000618834 N4BP1O75113 896 aaKnown RBP12.58□□□□□ -0.4
PCDHA4-204ENST00000618834 HERC4Q5GLZ8 1057 aaPredicted RBP12.58□□□□□ -0.4
PCDHA4-204ENST00000618834 DCLK2Q8N568 766 aa12.58□□□□□ -0.4
PCDHA4-204ENST00000618834 LMNAP02545 664 aaKnown RBP12.58□□□□□ -0.4
PCDHA4-204ENST00000618834 INHBAP08476 426 aa12.58□□□□□ -0.4
PCDHA4-204ENST00000618834 MCF2P10911 925 aa12.58□□□□□ -0.4
PCDHA4-204ENST00000618834 SAT1P21673 171 aa12.58□□□□□ -0.4
PCDHA4-204ENST00000618834 NCAPH2Q6IBW4 605 aa12.58□□□□□ -0.4
PCDHA4-204ENST00000618834 LRRC8AQ8IWT6 810 aa12.58□□□□□ -0.4
PCDHA4-204ENST00000618834 GPCPD1Q9NPB8 672 aa12.58□□□□□ -0.4
PCDHA4-204ENST00000618834 E9PMD0 336 aa12.58□□□□□ -0.4
PCDHA4-204ENST00000618834 EEF1GP26641 437 aaKnown RBP12.58□□□□□ -0.4
PCDHA4-204ENST00000618834 WAPLQ7Z5K2 1190 aa12.58□□□□□ -0.4
PCDHA4-204ENST00000618834 IFNL2Q8IZJ0 200 aa12.58□□□□□ -0.4
PCDHA4-204ENST00000618834 ABCB4P21439 1286 aa12.57□□□□□ -0.4
PCDHA4-204ENST00000618834 TRMT44Q8IYL2 757 aaKnown RBP12.57□□□□□ -0.4
PCDHA4-204ENST00000618834 KRT82Q9NSB4 513 aa12.57□□□□□ -0.4
PCDHA4-204ENST00000618834 PRPF6O94906 941 aaKnown RBP12.57□□□□□ -0.4
PCDHA4-204ENST00000618834 BIRC2Q13490 618 aa12.57□□□□□ -0.4
PCDHA4-204ENST00000618834 SNX1Q13596 522 aa12.57□□□□□ -0.4
PCDHA4-204ENST00000618834 PDZD4Q76G19 769 aaPredicted RBP12.57□□□□□ -0.4
PCDHA4-204ENST00000618834 NCOA5Q9HCD5 579 aaKnown RBP12.57□□□□□ -0.4
PCDHA4-204ENST00000618834 LONP1P36776 959 aaKnown RBP12.57□□□□□ -0.4
PCDHA4-204ENST00000618834 CDKL2Q92772 493 aa12.57□□□□□ -0.4
PCDHA4-204ENST00000618834 LMBRD1Q9NUN5 540 aa12.57□□□□□ -0.4
PCDHA4-204ENST00000618834 TTI1O43156 1089 aa12.57□□□□□ -0.4
PCDHA4-204ENST00000618834 STAT1P42224 750 aa12.57□□□□□ -0.4
PCDHA4-204ENST00000618834 ADCY7P51828 1080 aa12.57□□□□□ -0.4
PCDHA4-204ENST00000618834 ABCC1P33527 1531 aa12.57□□□□□ -0.4
PCDHA4-204ENST00000618834 ART3Q13508 389 aa12.57□□□□□ -0.4
PCDHA4-204ENST00000618834 CAPN12Q6ZSI9 719 aa12.57□□□□□ -0.4
PCDHA4-204ENST00000618834 KLHL29Q96CT2 875 aa12.57□□□□□ -0.4
PCDHA4-204ENST00000618834 SERPINI1Q99574 410 aa12.57□□□□□ -0.4
PCDHA4-204ENST00000618834 DCTPP1Q9H773 170 aa12.57□□□□□ -0.4
PCDHA4-204ENST00000618834 SMYD2Q9NRG4 433 aa12.57□□□□□ -0.4
PCDHA4-204ENST00000618834 IBTKQ9P2D0 1353 aaPredicted RBP12.57□□□□□ -0.4
PCDHA4-204ENST00000618834 NOP56O00567 594 aaKnown RBP12.57□□□□□ -0.4
PCDHA4-204ENST00000618834 SERPINI2O75830 405 aa12.57□□□□□ -0.4
PCDHA4-204ENST00000618834 TRIM60Q495X7 471 aa12.57□□□□□ -0.4
PCDHA4-204ENST00000618834 MCTP2Q6DN12 878 aa12.57□□□□□ -0.4
PCDHA4-204ENST00000618834 PPP1R13BQ96KQ4 1090 aa12.57□□□□□ -0.4
PCDHA4-204ENST00000618834 NYXQ9GZU5 481 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms