RNA–Protein interactions for RNA: ENST00000618533.4

RPP40-207, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 5 BASIC

Gene RPP40, Length 1,056 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-207ENST00000618533 ZSCAN10Q96SZ4 725 aaPredicted RBP18.36■□□□□ 0.53
RPP40-207ENST00000618533 UBAC1Q9BSL1 405 aa18.36■□□□□ 0.53
RPP40-207ENST00000618533 MCOLN1Q9GZU1 580 aa18.36■□□□□ 0.53
RPP40-207ENST00000618533 FEM1BQ9UK73 627 aa18.36■□□□□ 0.53
RPP40-207ENST00000618533 ADAMTS5Q9UNA0 930 aa18.36■□□□□ 0.53
RPP40-207ENST00000618533 ZSWIM8A7E2V4 1837 aa18.35■□□□□ 0.53
RPP40-207ENST00000618533 SLC27A2O14975 620 aa18.35■□□□□ 0.53
RPP40-207ENST00000618533 PLA2G6O60733 806 aa18.35■□□□□ 0.53
RPP40-207ENST00000618533 FMNL1O95466 1100 aaPredicted RBP18.35■□□□□ 0.53
RPP40-207ENST00000618533 FDX1P10109 184 aa18.35■□□□□ 0.53
RPP40-207ENST00000618533 BMP3P12645 472 aa18.35■□□□□ 0.53
RPP40-207ENST00000618533 SLC1A4P43007 532 aa18.35■□□□□ 0.53
RPP40-207ENST00000618533 CREB3L3Q68CJ9 461 aa18.35■□□□□ 0.53
RPP40-207ENST00000618533 RCSD1Q6JBY9 416 aa18.35■□□□□ 0.53
RPP40-207ENST00000618533 PRPF38AQ8NAV1 312 aaKnown RBP18.35■□□□□ 0.53
RPP40-207ENST00000618533 DCAF4Q8WV16 495 aa18.35■□□□□ 0.53
RPP40-207ENST00000618533 SLF1Q9BQI6 1058 aa18.35■□□□□ 0.53
RPP40-207ENST00000618533 TMEM47Q9BQJ4 181 aa18.35■□□□□ 0.53
RPP40-207ENST00000618533 MTA3Q9BTC8 594 aa18.35■□□□□ 0.53
RPP40-207ENST00000618533 TXNRD2Q9NNW7 524 aa18.35■□□□□ 0.53
RPP40-207ENST00000618533 PPP1R9AQ9ULJ8 1098 aa18.35■□□□□ 0.53
RPP40-207ENST00000618533 COL11A1P12107 1806 aaPredicted RBP18.35■□□□□ 0.53
RPP40-207ENST00000618533 TNPO2O14787 897 aaKnown RBP18.34■□□□□ 0.53
RPP40-207ENST00000618533 MAPK4P31152 587 aa18.34■□□□□ 0.53
RPP40-207ENST00000618533 SART3Q15020 963 aaKnown RBP18.34■□□□□ 0.53
RPP40-207ENST00000618533 FAM160B2Q86V87 743 aa18.34■□□□□ 0.53
RPP40-207ENST00000618533 CHURC1Q8WUH1 139 aa18.34■□□□□ 0.53
RPP40-207ENST00000618533 COA7Q96BR5 231 aa18.34■□□□□ 0.53
RPP40-207ENST00000618533 TRIM47Q96LD4 638 aa18.34■□□□□ 0.53
RPP40-207ENST00000618533 PAGR1Q9BTK6 254 aa18.34■□□□□ 0.53
RPP40-207ENST00000618533 PTPN22Q9Y2R2 807 aa18.34■□□□□ 0.53
RPP40-207ENST00000618533 DOCK3Q8IZD9 2030 aa18.33■□□□□ 0.53
RPP40-207ENST00000618533 TNKSO95271 1327 aa18.33■□□□□ 0.53
RPP40-207ENST00000618533 ZKSCAN1P17029 563 aaPredicted RBP18.33■□□□□ 0.52
RPP40-207ENST00000618533 STAT2P52630 851 aa18.33■□□□□ 0.52
RPP40-207ENST00000618533 TSGA10IPQ3SY00 556 aa18.33■□□□□ 0.52
RPP40-207ENST00000618533 CCAR1Q8IX12 1150 aaKnown RBP18.33■□□□□ 0.52
RPP40-207ENST00000618533 ENAHQ8N8S7 591 aaPredicted RBP18.33■□□□□ 0.52
RPP40-207ENST00000618533 ARHGAP39Q9C0H5 1083 aa18.33■□□□□ 0.52
RPP40-207ENST00000618533 SRRDQ9UH36 339 aa18.33■□□□□ 0.52
RPP40-207ENST00000618533 ERICH2A1L162 156 aa18.32■□□□□ 0.52
RPP40-207ENST00000618533 CNMDO75829 334 aa18.32■□□□□ 0.52
RPP40-207ENST00000618533 MCCP23508 829 aa18.32■□□□□ 0.52
RPP40-207ENST00000618533 CTGFP29279 349 aa18.32■□□□□ 0.52
RPP40-207ENST00000618533 COPB2P35606 906 aa18.32■□□□□ 0.52
RPP40-207ENST00000618533 KRT32Q14532 448 aa18.32■□□□□ 0.52
RPP40-207ENST00000618533 POTEEQ6S8J3 1075 aa18.32■□□□□ 0.52
RPP40-207ENST00000618533 STOX1Q6ZVD7 989 aa18.32■□□□□ 0.52
RPP40-207ENST00000618533 SHCBP1Q8NEM2 672 aa18.32■□□□□ 0.52
RPP40-207ENST00000618533 NKX2-3Q8TAU0 364 aa18.32■□□□□ 0.52
RPP40-207ENST00000618533 ATG4CQ96DT6 458 aa18.32■□□□□ 0.52
RPP40-207ENST00000618533 NUP88Q99567 741 aaPredicted RBP18.32■□□□□ 0.52
RPP40-207ENST00000618533 ZKSCAN3Q9BRR0 538 aa18.32■□□□□ 0.52
RPP40-207ENST00000618533 KAT14Q9H8E8 782 aa18.32■□□□□ 0.52
RPP40-207ENST00000618533 VWA5AO00534 786 aa18.31■□□□□ 0.52
RPP40-207ENST00000618533 SNHG28P0DPA3 235 aa18.31■□□□□ 0.52
RPP40-207ENST00000618533 CAP1Q01518 475 aa18.31■□□□□ 0.52
RPP40-207ENST00000618533 IFIT1BQ5T764 474 aaKnown RBP18.31■□□□□ 0.52
RPP40-207ENST00000618533 CYB5R4Q7L1T6 521 aa18.31■□□□□ 0.52
RPP40-207ENST00000618533 MB21D2Q8IYB1 491 aaPredicted RBP18.31■□□□□ 0.52
RPP40-207ENST00000618533 PNMA1Q8ND90 353 aa18.31■□□□□ 0.52
RPP40-207ENST00000618533 SOCS4Q8WXH5 440 aa18.31■□□□□ 0.52
RPP40-207ENST00000618533 SPATC1LQ9H0A9 340 aa18.31■□□□□ 0.52
RPP40-207ENST00000618533 FBXO28Q9NVF7 368 aa18.31■□□□□ 0.52
RPP40-207ENST00000618533 BTBD7Q9P203 1132 aa18.31■□□□□ 0.52
RPP40-207ENST00000618533 TMEM232C9JQI7 657 aa18.3■□□□□ 0.52
RPP40-207ENST00000618533 ATP2A1O14983 1001 aa18.3■□□□□ 0.52
RPP40-207ENST00000618533 SLC25A27O95847 323 aa18.3■□□□□ 0.52
RPP40-207ENST00000618533 PDHBP11177 359 aa18.3■□□□□ 0.52
RPP40-207ENST00000618533 MCM5P33992 734 aa18.3■□□□□ 0.52
RPP40-207ENST00000618533 OAZ1P54368 228 aa18.3■□□□□ 0.52
RPP40-207ENST00000618533 IRF5Q13568 498 aa18.3■□□□□ 0.52
RPP40-207ENST00000618533 SEC23AQ15436 765 aa18.3■□□□□ 0.52
RPP40-207ENST00000618533 Q3C1V9 767 aa18.3■□□□□ 0.52
RPP40-207ENST00000618533 GPATCH4Q5T3I0 446 aaKnown RBP18.3■□□□□ 0.52
RPP40-207ENST00000618533 MROH8Q9H579 483 aa18.3■□□□□ 0.52
RPP40-207ENST00000618533 TAF6LQ9Y6J9 622 aa18.3■□□□□ 0.52
RPP40-207ENST00000618533 ZNF236Q9UL36 1845 aa18.29■□□□□ 0.52
RPP40-207ENST00000618533 IFIT3O14879 490 aaKnown RBP18.29■□□□□ 0.52
RPP40-207ENST00000618533 ZBED4O75132 1171 aa18.29■□□□□ 0.52
RPP40-207ENST00000618533 HSPA4P34932 840 aa18.29■□□□□ 0.52
RPP40-207ENST00000618533 CCDC96Q2M329 555 aa18.29■□□□□ 0.52
RPP40-207ENST00000618533 BTNL9Q6UXG8 535 aa18.29■□□□□ 0.52
RPP40-207ENST00000618533 KCNB2Q92953 911 aa18.29■□□□□ 0.52
RPP40-207ENST00000618533 TMEM87BQ96K49 555 aa18.29■□□□□ 0.52
RPP40-207ENST00000618533 CWC22Q9HCG8 908 aaKnown RBP18.29■□□□□ 0.52
RPP40-207ENST00000618533 ISY1Q9ULR0 285 aaKnown RBP18.29■□□□□ 0.52
RPP40-207ENST00000618533 CTDP1Q9Y5B0 961 aaPredicted RBP18.29■□□□□ 0.52
RPP40-207ENST00000618533 PLXNB2O15031 1838 aa18.28■□□□□ 0.52
RPP40-207ENST00000618533 WDR19Q8NEZ3 1342 aa18.28■□□□□ 0.52
RPP40-207ENST00000618533 STRNO43815 780 aa18.28■□□□□ 0.52
RPP40-207ENST00000618533 HMGB1P09429 215 aaKnown RBP18.28■□□□□ 0.52
RPP40-207ENST00000618533 ZNF543Q08ER8 600 aa18.28■□□□□ 0.52
RPP40-207ENST00000618533 IKQ13123 557 aaPredicted RBP18.28■□□□□ 0.52
RPP40-207ENST00000618533 TMEM132BQ14DG7 1078 aa18.28■□□□□ 0.52
RPP40-207ENST00000618533 WTAPQ15007 396 aa18.28■□□□□ 0.52
RPP40-207ENST00000618533 KCTD1Q719H9 257 aa18.28■□□□□ 0.52
RPP40-207ENST00000618533 GPR142Q7Z601 462 aa18.28■□□□□ 0.52
RPP40-207ENST00000618533 PLEKHH3Q7Z736 793 aa18.28■□□□□ 0.52
RPP40-207ENST00000618533 RIOX2Q8IUF8 465 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms