RNA–Protein interactions for RNA: ENST00000617474.1

PTPRT-210, Transcript of protein tyrosine phosphatase, receptor type T, humanhuman

TSL 5

Gene PTPRT, Length 4,521 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRT-210ENST00000617474 POTEDQ86YR6 584 aa17.14■□□□□ 0.33
PTPRT-210ENST00000617474 PCDHB13Q9Y5F0 798 aa17.14■□□□□ 0.33
PTPRT-210ENST00000617474 SCG2P13521 617 aa17.14■□□□□ 0.33
PTPRT-210ENST00000617474 PNMA1Q8ND90 353 aa17.14■□□□□ 0.33
PTPRT-210ENST00000617474 ANKRD2Q9GZV1 360 aa17.14■□□□□ 0.33
PTPRT-210ENST00000617474 SYNCQ9H7C4 482 aa17.14■□□□□ 0.33
PTPRT-210ENST00000617474 MTUS1Q9ULD2 1270 aa17.14■□□□□ 0.33
PTPRT-210ENST00000617474 CDK12Q9NYV4 1490 aaPredicted RBP17.14■□□□□ 0.33
PTPRT-210ENST00000617474 PARP10Q53GL7 1025 aa17.14■□□□□ 0.33
PTPRT-210ENST00000617474 UTP11Q9Y3A2 253 aaKnown RBP17.14■□□□□ 0.33
PTPRT-210ENST00000617474 RRP15Q9Y3B9 282 aaKnown RBP17.14■□□□□ 0.33
PTPRT-210ENST00000617474 CPSF1Q10570 1443 aaKnown RBP17.14■□□□□ 0.33
PTPRT-210ENST00000617474 ERCC6L2Q5T890 1561 aa17.13■□□□□ 0.33
PTPRT-210ENST00000617474 CCDC151A5D8V7 595 aa17.13■□□□□ 0.33
PTPRT-210ENST00000617474 SNAP23O00161 211 aa17.13■□□□□ 0.33
PTPRT-210ENST00000617474 CAPS2Q9BXY5 557 aa17.13■□□□□ 0.33
PTPRT-210ENST00000617474 GNPATO15228 680 aa17.13■□□□□ 0.33
PTPRT-210ENST00000617474 ST5P78524 1137 aa17.13■□□□□ 0.33
PTPRT-210ENST00000617474 UBE3CQ15386 1083 aa17.13■□□□□ 0.33
PTPRT-210ENST00000617474 SARM1Q6SZW1 724 aa17.13■□□□□ 0.33
PTPRT-210ENST00000617474 RPGRIP1Q96KN7 1286 aa17.13■□□□□ 0.33
PTPRT-210ENST00000617474 GSDMAQ96QA5 445 aa17.13■□□□□ 0.33
PTPRT-210ENST00000617474 TUBGCP2Q9BSJ2 902 aa17.13■□□□□ 0.33
PTPRT-210ENST00000617474 BAIAP2L1Q9UHR4 511 aa17.13■□□□□ 0.33
PTPRT-210ENST00000617474 ERCC5P28715 1186 aaPredicted RBP17.13■□□□□ 0.33
PTPRT-210ENST00000617474 VWA3BQ502W6 1294 aa17.13■□□□□ 0.33
PTPRT-210ENST00000617474 RUFY4Q6ZNE9 571 aa17.13■□□□□ 0.33
PTPRT-210ENST00000617474 DPH6Q7L8W6 267 aa17.13■□□□□ 0.33
PTPRT-210ENST00000617474 CERS3Q8IU89 383 aa17.13■□□□□ 0.33
PTPRT-210ENST00000617474 FAM71BQ8TC56 605 aa17.13■□□□□ 0.33
PTPRT-210ENST00000617474 FAM212AQ96EL1 285 aa17.13■□□□□ 0.33
PTPRT-210ENST00000617474 CTTNBP2NLQ9P2B4 639 aa17.13■□□□□ 0.33
PTPRT-210ENST00000617474 ARHGAP44Q17R89 818 aa17.13■□□□□ 0.33
PTPRT-210ENST00000617474 LSM14BQ9BX40 385 aaKnown RBP17.13■□□□□ 0.33
PTPRT-210ENST00000617474 ST7Q9NRC1 585 aa17.13■□□□□ 0.33
PTPRT-210ENST00000617474 FRMD4BQ9Y2L6 1034 aa17.13■□□□□ 0.33
PTPRT-210ENST00000617474 MED23Q9ULK4 1368 aa17.12■□□□□ 0.33
PTPRT-210ENST00000617474 PCCAP05165 728 aaPredicted RBP17.12■□□□□ 0.33
PTPRT-210ENST00000617474 GUCY2DQ02846 1103 aa17.12■□□□□ 0.33
PTPRT-210ENST00000617474 SEL1L2Q5TEA6 688 aa17.12■□□□□ 0.33
PTPRT-210ENST00000617474 NAA35Q5VZE5 725 aa17.12■□□□□ 0.33
PTPRT-210ENST00000617474 HYOU1Q9Y4L1 999 aa17.12■□□□□ 0.33
PTPRT-210ENST00000617474 RNF40O75150 1001 aa17.12■□□□□ 0.33
PTPRT-210ENST00000617474 UFL1O94874 794 aa17.12■□□□□ 0.33
PTPRT-210ENST00000617474 CTNNA1P35221 906 aaKnown RBP17.12■□□□□ 0.33
PTPRT-210ENST00000617474 ARHGEF25Q86VW2 580 aa17.12■□□□□ 0.33
PTPRT-210ENST00000617474 NYXQ9GZU5 481 aa17.12■□□□□ 0.33
PTPRT-210ENST00000617474 DPH5Q9H2P9 285 aa17.12■□□□□ 0.33
PTPRT-210ENST00000617474 RTCBQ9Y3I0 505 aaKnown RBP17.12■□□□□ 0.33
PTPRT-210ENST00000617474 SETD1BQ9UPS6 1966 aaKnown RBP17.12■□□□□ 0.33
PTPRT-210ENST00000617474 CYP2D7A0A087X1C5 515 aa17.12■□□□□ 0.33
PTPRT-210ENST00000617474 EHHADHQ08426 723 aa17.12■□□□□ 0.33
PTPRT-210ENST00000617474 ENOX1Q8TC92 643 aaKnown RBP17.12■□□□□ 0.33
PTPRT-210ENST00000617474 MGARPQ8TDB4 240 aa17.12■□□□□ 0.33
PTPRT-210ENST00000617474 ABCB6Q9NP58 842 aa17.12■□□□□ 0.33
PTPRT-210ENST00000617474 MED4Q9NPJ6 270 aa17.12■□□□□ 0.33
PTPRT-210ENST00000617474 ASAP1Q9ULH1 1129 aa17.12■□□□□ 0.33
PTPRT-210ENST00000617474 ACTN4O43707 911 aaKnown RBP17.11■□□□□ 0.33
PTPRT-210ENST00000617474 ADCY7P51828 1080 aa17.11■□□□□ 0.33
PTPRT-210ENST00000617474 TOGARAM2Q6ZUX3 1019 aa17.11■□□□□ 0.33
PTPRT-210ENST00000617474 FMR1NBQ8N0W7 255 aaPredicted RBP17.11■□□□□ 0.33
PTPRT-210ENST00000617474 POLR2FP61218 127 aaKnown RBP17.11■□□□□ 0.33
PTPRT-210ENST00000617474 RASSF7Q02833 373 aa17.11■□□□□ 0.33
PTPRT-210ENST00000617474 NKIRAS1Q9NYS0 192 aa17.11■□□□□ 0.33
PTPRT-210ENST00000617474 SLFN14P0C7P3 912 aa17.11■□□□□ 0.33
PTPRT-210ENST00000617474 FOXP1Q9H334 677 aaPredicted RBP17.11■□□□□ 0.33
PTPRT-210ENST00000617474 ASIC3Q9UHC3 531 aa17.11■□□□□ 0.33
PTPRT-210ENST00000617474 TAF6LQ9Y6J9 622 aa17.11■□□□□ 0.33
PTPRT-210ENST00000617474 FLOT1O75955 427 aa17.1■□□□□ 0.33
PTPRT-210ENST00000617474 MMP1P03956 469 aa17.1■□□□□ 0.33
PTPRT-210ENST00000617474 ADD2P35612 726 aa17.1■□□□□ 0.33
PTPRT-210ENST00000617474 IRX5P78411 483 aaPredicted RBP17.1■□□□□ 0.33
PTPRT-210ENST00000617474 USH1GQ495M9 461 aa17.1■□□□□ 0.33
PTPRT-210ENST00000617474 C6orf163Q5TEZ5 329 aa17.1■□□□□ 0.33
PTPRT-210ENST00000617474 CNOT6LQ96LI5 555 aaKnown RBP17.1■□□□□ 0.33
PTPRT-210ENST00000617474 RPAP1Q9BWH6 1393 aaPredicted RBP17.1■□□□□ 0.33
PTPRT-210ENST00000617474 SH2B2O14492 632 aaPredicted RBP17.1■□□□□ 0.33
PTPRT-210ENST00000617474 GCNT3O95395 438 aa17.1■□□□□ 0.33
PTPRT-210ENST00000617474 KRT5P13647 590 aa17.1■□□□□ 0.33
PTPRT-210ENST00000617474 ARHGAP25P42331 645 aa17.1■□□□□ 0.33
PTPRT-210ENST00000617474 KLRF2D3W0D1 207 aa17.1■□□□□ 0.33
PTPRT-210ENST00000617474 ATP2A1O14983 1001 aa17.1■□□□□ 0.33
PTPRT-210ENST00000617474 UAP1Q16222 522 aaPredicted RBP17.1■□□□□ 0.33
PTPRT-210ENST00000617474 U2AF1L4Q8WU68 220 aaKnown RBP17.1■□□□□ 0.33
PTPRT-210ENST00000617474 FMNL1O95466 1100 aaPredicted RBP17.09■□□□□ 0.33
PTPRT-210ENST00000617474 TCP1P17987 556 aaKnown RBP17.09■□□□□ 0.33
PTPRT-210ENST00000617474 ZYXQ15942 572 aaKnown RBP17.09■□□□□ 0.33
PTPRT-210ENST00000617474 USP37Q86T82 979 aa17.09■□□□□ 0.33
PTPRT-210ENST00000617474 SEC31BQ9NQW1 1179 aa17.09■□□□□ 0.33
PTPRT-210ENST00000617474 HARSP12081 509 aaKnown RBP17.09■□□□□ 0.33
PTPRT-210ENST00000617474 DYNLL1P63167 89 aaKnown RBP17.09■□□□□ 0.33
PTPRT-210ENST00000617474 CASP8Q14790 479 aa17.09■□□□□ 0.33
PTPRT-210ENST00000617474 CCDC87Q9NVE4 849 aa17.09■□□□□ 0.33
PTPRT-210ENST00000617474 MYO1AQ9UBC5 1043 aa17.09■□□□□ 0.33
PTPRT-210ENST00000617474 ADAM21Q9UKJ8 722 aa17.09■□□□□ 0.33
PTPRT-210ENST00000617474 DDX39AO00148 427 aaKnown RBP17.09■□□□□ 0.33
PTPRT-210ENST00000617474 IFNAR1P17181 557 aa17.09■□□□□ 0.33
PTPRT-210ENST00000617474 SETDB1Q15047 1291 aa17.09■□□□□ 0.33
PTPRT-210ENST00000617474 INTS8Q75QN2 995 aaKnown RBP17.09■□□□□ 0.33
PTPRT-210ENST00000617474 LCORLQ8N3X6 602 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms