RNA–Protein interactions for RNA: ENST00000617432.4

CUL3-216, Transcript of cullin 3, humanhuman

TSL 5 BASIC

Gene CUL3, Length 1,426 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-216ENST00000617432 KRT82Q9NSB4 513 aa6.69□□□□□ -1.34
CUL3-216ENST00000617432 LAMC1P11047 1609 aa6.69□□□□□ -1.34
CUL3-216ENST00000617432 FMN2Q9NZ56 1722 aa6.69□□□□□ -1.34
CUL3-216ENST00000617432 BMP7P18075 431 aa6.68□□□□□ -1.34
CUL3-216ENST00000617432 MPSTP25325 297 aa6.68□□□□□ -1.34
CUL3-216ENST00000617432 TMEM164Q5U3C3 297 aa6.68□□□□□ -1.34
CUL3-216ENST00000617432 NPAS4Q8IUM7 802 aa6.68□□□□□ -1.34
CUL3-216ENST00000617432 C14orf93Q9H972 538 aaKnown RBP6.68□□□□□ -1.34
CUL3-216ENST00000617432 USP32Q8NFA0 1604 aa6.68□□□□□ -1.34
CUL3-216ENST00000617432 ABCC11Q96J66 1382 aa6.68□□□□□ -1.34
CUL3-216ENST00000617432 RGPD8O14715 1765 aaPredicted RBP6.68□□□□□ -1.34
CUL3-216ENST00000617432 GNAT3A8MTJ3 354 aa6.67□□□□□ -1.34
CUL3-216ENST00000617432 NEFMP07197 916 aa6.67□□□□□ -1.34
CUL3-216ENST00000617432 NFIXQ14938 502 aa6.67□□□□□ -1.34
CUL3-216ENST00000617432 GGNQ86UU5 652 aa6.67□□□□□ -1.34
CUL3-216ENST00000617432 ISL2Q96A47 359 aa6.67□□□□□ -1.34
CUL3-216ENST00000617432 SIN3AQ96ST3 1273 aa6.67□□□□□ -1.34
CUL3-216ENST00000617432 PNPLA6Q8IY17 1366 aa6.67□□□□□ -1.34
CUL3-216ENST00000617432 PXDNQ92626 1479 aa6.67□□□□□ -1.34
CUL3-216ENST00000617432 ARHGEF28Q8N1W1 1705 aaKnown RBP6.67□□□□□ -1.34
CUL3-216ENST00000617432 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.67□□□□□ -1.34
CUL3-216ENST00000617432 PTPN12Q05209 780 aaKnown RBP6.67□□□□□ -1.34
CUL3-216ENST00000617432 KIAA0319Q5VV43 1072 aa6.67□□□□□ -1.34
CUL3-216ENST00000617432 BORCS6Q96GS4 357 aa6.67□□□□□ -1.34
CUL3-216ENST00000617432 PRAM1Q96QH2 718 aa6.67□□□□□ -1.34
CUL3-216ENST00000617432 HIRIP3Q9BW71 556 aaPredicted RBP6.67□□□□□ -1.34
CUL3-216ENST00000617432 ZC3H12CQ9C0D7 883 aaKnown RBP6.67□□□□□ -1.34
CUL3-216ENST00000617432 TRAK1Q9UPV9 953 aa6.67□□□□□ -1.34
CUL3-216ENST00000617432 DLC1Q96QB1 1528 aa6.66□□□□□ -1.34
CUL3-216ENST00000617432 ATP2B4P23634 1241 aa6.66□□□□□ -1.34
CUL3-216ENST00000617432 KRTAP10-2P60368 255 aa6.66□□□□□ -1.34
CUL3-216ENST00000617432 CXorf38Q8TB03 319 aa6.66□□□□□ -1.34
CUL3-216ENST00000617432 ABHD4Q8TB40 342 aa6.66□□□□□ -1.34
CUL3-216ENST00000617432 KCNC2Q96PR1 638 aa6.66□□□□□ -1.34
CUL3-216ENST00000617432 PRDM10Q9NQV6 1147 aa6.66□□□□□ -1.34
CUL3-216ENST00000617432 ADGRB2O60241 1585 aa6.65□□□□□ -1.35
CUL3-216ENST00000617432 ATG7O95352 703 aa6.65□□□□□ -1.35
CUL3-216ENST00000617432 AAMPQ13685 434 aa6.65□□□□□ -1.35
CUL3-216ENST00000617432 RPS26P11Q5JNZ5 115 aaPredicted RBP6.65□□□□□ -1.35
CUL3-216ENST00000617432 TMPRSS5Q9H3S3 457 aa6.65□□□□□ -1.35
CUL3-216ENST00000617432 PRR36Q9H6K5 1346 aa6.65□□□□□ -1.35
CUL3-216ENST00000617432 RAC2P15153 192 aa6.64□□□□□ -1.35
CUL3-216ENST00000617432 MEX3CQ5U5Q3 659 aaKnown RBP6.64□□□□□ -1.35
CUL3-216ENST00000617432 PRRT2Q7Z6L0 340 aaPredicted RBP6.64□□□□□ -1.35
CUL3-216ENST00000617432 RNF214Q8ND24 703 aa6.64□□□□□ -1.35
CUL3-216ENST00000617432 SEMA3GQ9NS98 782 aa6.64□□□□□ -1.35
CUL3-216ENST00000617432 RTEL1Q9NZ71 1219 aa6.64□□□□□ -1.35
CUL3-216ENST00000617432 SPATA31A6Q5VVP1 1343 aa6.64□□□□□ -1.35
CUL3-216ENST00000617432 COL22A1Q8NFW1 1626 aaPredicted RBP6.63□□□□□ -1.35
CUL3-216ENST00000617432 GSTP1P09211 210 aaKnown RBP6.63□□□□□ -1.35
CUL3-216ENST00000617432 ATP13A1Q9HD20 1204 aa6.63□□□□□ -1.35
CUL3-216ENST00000617432 KIF1AQ12756 1690 aa6.63□□□□□ -1.35
CUL3-216ENST00000617432 PSPNO60542 156 aa6.62□□□□□ -1.35
CUL3-216ENST00000617432 ERVK-24P63145 666 aa6.62□□□□□ -1.35
CUL3-216ENST00000617432 NFKB2Q00653 900 aa6.62□□□□□ -1.35
CUL3-216ENST00000617432 GJD3Q8N144 294 aa6.62□□□□□ -1.35
CUL3-216ENST00000617432 MARCH10Q8NA82 808 aaPredicted RBP6.62□□□□□ -1.35
CUL3-216ENST00000617432 BAHD1Q8TBE0 780 aaPredicted RBP6.62□□□□□ -1.35
CUL3-216ENST00000617432 PMFBP1Q8TBY8 1022 aa6.62□□□□□ -1.35
CUL3-216ENST00000617432 C8orf37Q96NL8 207 aa6.62□□□□□ -1.35
CUL3-216ENST00000617432 FOXQ1Q9C009 403 aa6.62□□□□□ -1.35
CUL3-216ENST00000617432 POGKQ9P215 609 aa6.62□□□□□ -1.35
CUL3-216ENST00000617432 AFF2P51816 1311 aa6.62□□□□□ -1.35
CUL3-216ENST00000617432 CNTNAP4Q9C0A0 1308 aa6.62□□□□□ -1.35
CUL3-216ENST00000617432 ABCA3Q99758 1704 aa6.62□□□□□ -1.35
CUL3-216ENST00000617432 TRPM3Q9HCF6 1732 aaPredicted RBP6.61□□□□□ -1.35
CUL3-216ENST00000617432 TRPM1Q7Z4N2 1603 aa6.61□□□□□ -1.35
CUL3-216ENST00000617432 TULP4Q9NRJ4 1543 aa6.61□□□□□ -1.35
CUL3-216ENST00000617432 ATP7BP35670 1465 aa6.61□□□□□ -1.35
CUL3-216ENST00000617432 NPR3P17342 541 aa6.61□□□□□ -1.35
CUL3-216ENST00000617432 SRPK2P78362 688 aaKnown RBP6.61□□□□□ -1.35
CUL3-216ENST00000617432 SKOR2Q2VWA4 1001 aaPredicted RBP6.61□□□□□ -1.35
CUL3-216ENST00000617432 LRRC59Q96AG4 307 aaKnown RBP6.61□□□□□ -1.35
CUL3-216ENST00000617432 HSPA12BQ96MM6 686 aa6.61□□□□□ -1.35
CUL3-216ENST00000617432 ALPK1Q96QP1 1244 aa6.61□□□□□ -1.35
CUL3-216ENST00000617432 KIAA1210Q9ULL0 1709 aa6.61□□□□□ -1.35
CUL3-216ENST00000617432 RGS12O14924 1447 aa6.6□□□□□ -1.35
CUL3-216ENST00000617432 NPHP3Q7Z494 1330 aa6.6□□□□□ -1.35
CUL3-216ENST00000617432 ZC3H12AQ5D1E8 599 aaKnown RBP6.6□□□□□ -1.35
CUL3-216ENST00000617432 GTF3C2Q8WUA4 911 aaPredicted RBP6.6□□□□□ -1.35
CUL3-216ENST00000617432 EHD4Q9H223 541 aa6.6□□□□□ -1.35
CUL3-216ENST00000617432 MAPK8IP1Q9UQF2 711 aa6.6□□□□□ -1.35
CUL3-216ENST00000617432 TOPAZ1Q8N9V7 1692 aa6.6□□□□□ -1.35
CUL3-216ENST00000617432 QRICH2Q9H0J4 1663 aa6.6□□□□□ -1.35
CUL3-216ENST00000617432 EOMESO95936 686 aa6.59□□□□□ -1.35
CUL3-216ENST00000617432 ADRB1P08588 477 aa6.59□□□□□ -1.35
CUL3-216ENST00000617432 NBPF8Q3BBV2 869 aa6.59□□□□□ -1.35
CUL3-216ENST00000617432 TCERG1LQ5VWI1 586 aa6.59□□□□□ -1.35
CUL3-216ENST00000617432 KRT28Q7Z3Y7 464 aa6.59□□□□□ -1.35
CUL3-216ENST00000617432 TTC6Q86TZ1 520 aa6.59□□□□□ -1.35
CUL3-216ENST00000617432 PRDM5Q9NQX1 630 aaPredicted RBP6.59□□□□□ -1.35
CUL3-216ENST00000617432 MARF1Q9Y4F3 1742 aaKnown RBP6.59□□□□□ -1.35
CUL3-216ENST00000617432 TNS3Q68CZ2 1445 aa6.59□□□□□ -1.35
CUL3-216ENST00000617432 ANKARQ7Z5J8 1434 aa6.59□□□□□ -1.35
CUL3-216ENST00000617432 CRYBG1Q9Y4K1 1723 aa6.59□□□□□ -1.35
CUL3-216ENST00000617432 SPATA31A3Q5VYP0 1347 aa6.59□□□□□ -1.36
CUL3-216ENST00000617432 ALS2Q96Q42 1657 aa6.59□□□□□ -1.36
CUL3-216ENST00000617432 FZD6O60353 706 aa6.59□□□□□ -1.36
CUL3-216ENST00000617432 FAM13AO94988 1023 aa6.59□□□□□ -1.36
CUL3-216ENST00000617432 ERICH6BQ5W0A0 696 aa6.59□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms