RNA–Protein interactions for RNA: ENST00000616944.4

CBWD1-225, Transcript of COBW domain containing 1, humanhuman

TSL 2

Gene CBWD1, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-225ENST00000616944 LZTS2Q9BRK4 669 aa17.62■□□□□ 0.41
CBWD1-225ENST00000616944 SPZ1Q9BXG8 430 aa17.62■□□□□ 0.41
CBWD1-225ENST00000616944 KIAA1683Q9H0B3 1180 aa17.62■□□□□ 0.41
CBWD1-225ENST00000616944 VCPKMTQ9H867 229 aa17.62■□□□□ 0.41
CBWD1-225ENST00000616944 PICK1Q9NRD5 415 aa17.62■□□□□ 0.41
CBWD1-225ENST00000616944 PRPF3O43395 683 aaKnown RBP17.61■□□□□ 0.41
CBWD1-225ENST00000616944 SSRP1Q08945 709 aaKnown RBP17.61■□□□□ 0.41
CBWD1-225ENST00000616944 CCDC82Q8N4S0 544 aa17.61■□□□□ 0.41
CBWD1-225ENST00000616944 SLC26A6Q9BXS9 759 aa17.61■□□□□ 0.41
CBWD1-225ENST00000616944 GOPCQ9HD26 462 aa17.61■□□□□ 0.41
CBWD1-225ENST00000616944 ZDHHC9Q9Y397 364 aa17.61■□□□□ 0.41
CBWD1-225ENST00000616944 TCHHQ07283 1943 aa17.61■□□□□ 0.41
CBWD1-225ENST00000616944 ITGBL1O95965 494 aaPredicted RBP17.61■□□□□ 0.41
CBWD1-225ENST00000616944 PDCP20941 246 aa17.61■□□□□ 0.41
CBWD1-225ENST00000616944 PKN1Q16512 942 aa17.61■□□□□ 0.41
CBWD1-225ENST00000616944 FRMPD2Q68DX3 1309 aaPredicted RBP17.61■□□□□ 0.41
CBWD1-225ENST00000616944 MOB2Q70IA6 237 aa17.61■□□□□ 0.41
CBWD1-225ENST00000616944 TRIM22Q8IYM9 498 aa17.61■□□□□ 0.41
CBWD1-225ENST00000616944 RIOX1Q9H6W3 641 aa17.61■□□□□ 0.41
CBWD1-225ENST00000616944 KIF3AQ9Y496 699 aa17.61■□□□□ 0.41
CBWD1-225ENST00000616944 STX6O43752 255 aa17.6■□□□□ 0.41
CBWD1-225ENST00000616944 TOMM70O94826 608 aa17.6■□□□□ 0.41
CBWD1-225ENST00000616944 DEXIO95424 95 aa17.6■□□□□ 0.41
CBWD1-225ENST00000616944 BRD1O95696 1058 aa17.6■□□□□ 0.41
CBWD1-225ENST00000616944 SLC1A4P43007 532 aa17.6■□□□□ 0.41
CBWD1-225ENST00000616944 NUCB2P80303 420 aa17.6■□□□□ 0.41
CBWD1-225ENST00000616944 LDLRAD1Q5T700 205 aa17.6■□□□□ 0.41
CBWD1-225ENST00000616944 LARP1BQ659C4 914 aaKnown RBP17.6■□□□□ 0.41
CBWD1-225ENST00000616944 CHADLQ6NUI6 762 aa17.6■□□□□ 0.41
CBWD1-225ENST00000616944 ANKRD13AQ8IZ07 590 aa17.6■□□□□ 0.41
CBWD1-225ENST00000616944 FAM184AQ8NB25 1140 aa17.6■□□□□ 0.41
CBWD1-225ENST00000616944 AIFM3Q96NN9 605 aa17.6■□□□□ 0.41
CBWD1-225ENST00000616944 CPVLQ9H3G5 476 aa17.6■□□□□ 0.41
CBWD1-225ENST00000616944 PDIA4P13667 645 aaKnown RBP17.59■□□□□ 0.41
CBWD1-225ENST00000616944 KCTD1Q719H9 257 aa17.59■□□□□ 0.41
CBWD1-225ENST00000616944 ZNF280CQ8ND82 737 aa17.59■□□□□ 0.41
CBWD1-225ENST00000616944 RGS22Q8NE09 1264 aa17.59■□□□□ 0.41
CBWD1-225ENST00000616944 NUP88Q99567 741 aaPredicted RBP17.59■□□□□ 0.41
CBWD1-225ENST00000616944 AS3MTQ9HBK9 375 aa17.59■□□□□ 0.41
CBWD1-225ENST00000616944 MTMR6Q9Y217 621 aa17.59■□□□□ 0.41
CBWD1-225ENST00000616944 AFG3L2Q9Y4W6 797 aa17.59■□□□□ 0.41
CBWD1-225ENST00000616944 CSADQ9Y600 493 aa17.59■□□□□ 0.41
CBWD1-225ENST00000616944 ZHX2Q9Y6X8 837 aa17.59■□□□□ 0.41
CBWD1-225ENST00000616944 UNCXA6NJT0 531 aa17.58■□□□□ 0.41
CBWD1-225ENST00000616944 USP17L10C9JJH3 530 aa17.58■□□□□ 0.41
CBWD1-225ENST00000616944 BMP3P12645 472 aa17.58■□□□□ 0.41
CBWD1-225ENST00000616944 BACE1P56817 501 aa17.58■□□□□ 0.41
CBWD1-225ENST00000616944 SPP2Q13103 211 aa17.58■□□□□ 0.41
CBWD1-225ENST00000616944 CCDC96Q2M329 555 aa17.58■□□□□ 0.41
CBWD1-225ENST00000616944 TTBK2Q6IQ55 1244 aa17.58■□□□□ 0.41
CBWD1-225ENST00000616944 ARMC9Q7Z3E5 817 aa17.58■□□□□ 0.41
CBWD1-225ENST00000616944 SPICE1Q8N0Z3 855 aa17.58■□□□□ 0.41
CBWD1-225ENST00000616944 LPAR1Q92633 364 aa17.58■□□□□ 0.41
CBWD1-225ENST00000616944 CLMNQ96JQ2 1002 aa17.58■□□□□ 0.41
CBWD1-225ENST00000616944 FEZ1Q99689 392 aa17.58■□□□□ 0.41
CBWD1-225ENST00000616944 RBM27Q9P2N5 1060 aaKnown RBP17.58■□□□□ 0.41
CBWD1-225ENST00000616944 V9GY48 417 aaPredicted RBP17.58■□□□□ 0.41
CBWD1-225ENST00000616944 SMCHD1A6NHR9 2005 aa17.58■□□□□ 0.41
CBWD1-225ENST00000616944 FKBP1BP68106 108 aa17.58■□□□□ 0.4
CBWD1-225ENST00000616944 MTMR2Q13614 643 aa17.58■□□□□ 0.4
CBWD1-225ENST00000616944 ZYXQ15942 572 aaKnown RBP17.58■□□□□ 0.4
CBWD1-225ENST00000616944 BTNL9Q6UXG8 535 aa17.58■□□□□ 0.4
CBWD1-225ENST00000616944 FBXO18Q8NFZ0 1043 aa17.58■□□□□ 0.4
CBWD1-225ENST00000616944 SHISA4Q96DD7 197 aa17.58■□□□□ 0.4
CBWD1-225ENST00000616944 MTMR8Q96EF0 704 aa17.58■□□□□ 0.4
CBWD1-225ENST00000616944 ALG1Q9BT22 464 aa17.58■□□□□ 0.4
CBWD1-225ENST00000616944 UBA5Q9GZZ9 404 aa17.58■□□□□ 0.4
CBWD1-225ENST00000616944 GPCPD1Q9NPB8 672 aa17.58■□□□□ 0.4
CBWD1-225ENST00000616944 WDR33Q9C0J8 1336 aaKnown RBP17.57■□□□□ 0.4
CBWD1-225ENST00000616944 COL11A1P12107 1806 aaPredicted RBP17.57■□□□□ 0.4
CBWD1-225ENST00000616944 hCG_1642624A0A1W2PR95 340 aa17.57■□□□□ 0.4
CBWD1-225ENST00000616944 SPDYE5A6NIY4 337 aa17.57■□□□□ 0.4
CBWD1-225ENST00000616944 RAD21O60216 631 aa17.57■□□□□ 0.4
CBWD1-225ENST00000616944 USP14P54578 494 aa17.57■□□□□ 0.4
CBWD1-225ENST00000616944 TTLL12Q14166 644 aaPredicted RBP17.57■□□□□ 0.4
CBWD1-225ENST00000616944 PFKFB3Q16875 520 aaPredicted RBP17.57■□□□□ 0.4
CBWD1-225ENST00000616944 RBM46Q8TBY0 533 aaKnown RBP17.57■□□□□ 0.4
CBWD1-225ENST00000616944 WASF1Q92558 559 aa17.57■□□□□ 0.4
CBWD1-225ENST00000616944 C12orf42Q96LP6 360 aa17.57■□□□□ 0.4
CBWD1-225ENST00000616944 EMILIN3Q9NT22 766 aa17.57■□□□□ 0.4
CBWD1-225ENST00000616944 GJB4Q9NTQ9 266 aa17.57■□□□□ 0.4
CBWD1-225ENST00000616944 TRIM75PA6NK02 468 aa17.56■□□□□ 0.4
CBWD1-225ENST00000616944 WDR46O15213 610 aaKnown RBP17.56■□□□□ 0.4
CBWD1-225ENST00000616944 PLA2G6O60733 806 aa17.56■□□□□ 0.4
CBWD1-225ENST00000616944 DGKZQ13574 1117 aa17.56■□□□□ 0.4
CBWD1-225ENST00000616944 FAM83BQ5T0W9 1011 aa17.56■□□□□ 0.4
CBWD1-225ENST00000616944 ERO1BQ86YB8 467 aa17.56■□□□□ 0.4
CBWD1-225ENST00000616944 ADGRF4Q8IZF3 695 aa17.56■□□□□ 0.4
CBWD1-225ENST00000616944 CNKSR2Q8WXI2 1034 aa17.56■□□□□ 0.4
CBWD1-225ENST00000616944 C8orf76Q96K31 380 aa17.56■□□□□ 0.4
CBWD1-225ENST00000616944 ZNF408Q9H9D4 720 aa17.56■□□□□ 0.4
CBWD1-225ENST00000616944 ELP3Q9H9T3 547 aa17.56■□□□□ 0.4
CBWD1-225ENST00000616944 JMJD4Q9H9V9 463 aa17.56■□□□□ 0.4
CBWD1-225ENST00000616944 C19orf81C9J6K1 198 aa17.55■□□□□ 0.4
CBWD1-225ENST00000616944 ZSCAN22P10073 491 aaPredicted RBP17.55■□□□□ 0.4
CBWD1-225ENST00000616944 SCG2P13521 617 aa17.55■□□□□ 0.4
CBWD1-225ENST00000616944 VCAM1P19320 739 aa17.55■□□□□ 0.4
CBWD1-225ENST00000616944 SLC16A2P36021 539 aa17.55■□□□□ 0.4
CBWD1-225ENST00000616944 AKAP17AQ02040 695 aaKnown RBP17.55■□□□□ 0.4
CBWD1-225ENST00000616944 PPATQ06203 517 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms