RNA–Protein interactions for RNA: ENST00000615317.4

MMP28-205, Transcript of matrix metallopeptidase 28, humanhuman

TSL 2

Gene MMP28, Length 436 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-205ENST00000615317 DCAF4Q8WV16 495 aa10.63□□□□□ -0.71
MMP28-205ENST00000615317 GTF3C6Q969F1 213 aa10.63□□□□□ -0.71
MMP28-205ENST00000615317 MKL1Q969V6 931 aa10.63□□□□□ -0.71
MMP28-205ENST00000615317 C12orf42Q96LP6 360 aa10.63□□□□□ -0.71
MMP28-205ENST00000615317 TANGO6Q9C0B7 1094 aa10.63□□□□□ -0.71
MMP28-205ENST00000615317 ALDH8A1Q9H2A2 487 aaPredicted RBP10.63□□□□□ -0.71
MMP28-205ENST00000615317 CPVLQ9H3G5 476 aa10.63□□□□□ -0.71
MMP28-205ENST00000615317 GPCPD1Q9NPB8 672 aa10.63□□□□□ -0.71
MMP28-205ENST00000615317 HPS5Q9UPZ3 1129 aa10.63□□□□□ -0.71
MMP28-205ENST00000615317 PLXNB2O15031 1838 aa10.63□□□□□ -0.71
MMP28-205ENST00000615317 CNTNAP5Q8WYK1 1306 aa10.62□□□□□ -0.71
MMP28-205ENST00000615317 FAM155AB1AL88 458 aaPredicted RBP10.62□□□□□ -0.71
MMP28-205ENST00000615317 K7ELQ4 463 aaPredicted RBP10.62□□□□□ -0.71
MMP28-205ENST00000615317 WDR46O15213 610 aaKnown RBP10.62□□□□□ -0.71
MMP28-205ENST00000615317 DTNBO60941 627 aa10.62□□□□□ -0.71
MMP28-205ENST00000615317 PPFIA3O75145 1194 aa10.62□□□□□ -0.71
MMP28-205ENST00000615317 PARP1P09874 1014 aaKnown RBP10.62□□□□□ -0.71
MMP28-205ENST00000615317 CALM1P0DP23 149 aa10.62□□□□□ -0.71
MMP28-205ENST00000615317 CALM2P0DP24 149 aa10.62□□□□□ -0.71
MMP28-205ENST00000615317 CALM3P0DP25 149 aa10.62□□□□□ -0.71
MMP28-205ENST00000615317 SNHG28P0DPA3 235 aa10.62□□□□□ -0.71
MMP28-205ENST00000615317 BMP3P12645 472 aa10.62□□□□□ -0.71
MMP28-205ENST00000615317 PDIA3P30101 505 aaKnown RBP10.62□□□□□ -0.71
MMP28-205ENST00000615317 ANP32AP39687 249 aaKnown RBP10.62□□□□□ -0.71
MMP28-205ENST00000615317 ZNF543Q08ER8 600 aa10.62□□□□□ -0.71
MMP28-205ENST00000615317 SCRN1Q12765 414 aa10.62□□□□□ -0.71
MMP28-205ENST00000615317 IKQ13123 557 aaPredicted RBP10.62□□□□□ -0.71
MMP28-205ENST00000615317 ASPRV1Q53RT3 343 aa10.62□□□□□ -0.71
MMP28-205ENST00000615317 SH3D19Q5HYK7 790 aa10.62□□□□□ -0.71
MMP28-205ENST00000615317 CCDC83Q8IWF9 413 aa10.62□□□□□ -0.71
MMP28-205ENST00000615317 CMTR1Q8N1G2 835 aaKnown RBP10.62□□□□□ -0.71
MMP28-205ENST00000615317 TMTC2Q8N394 836 aa10.62□□□□□ -0.71
MMP28-205ENST00000615317 STAG2Q8N3U4 1231 aa10.62□□□□□ -0.71
MMP28-205ENST00000615317 BRI3BPQ8WY22 251 aa10.62□□□□□ -0.71
MMP28-205ENST00000615317 LPAR1Q92633 364 aa10.62□□□□□ -0.71
MMP28-205ENST00000615317 GMCL1Q96IK5 515 aa10.62□□□□□ -0.71
MMP28-205ENST00000615317 TMX3Q96JJ7 454 aa10.62□□□□□ -0.71
MMP28-205ENST00000615317 HHIPL1Q96JK4 782 aa10.62□□□□□ -0.71
MMP28-205ENST00000615317 CAPNS2Q96L46 248 aa10.62□□□□□ -0.71
MMP28-205ENST00000615317 SLKQ9H2G2 1235 aaPredicted RBP10.62□□□□□ -0.71
MMP28-205ENST00000615317 RPAP3Q9H6T3 665 aaPredicted RBP10.62□□□□□ -0.71
MMP28-205ENST00000615317 MAD2L2Q9UI95 211 aa10.62□□□□□ -0.71
MMP28-205ENST00000615317 LIMCH1Q9UPQ0 1083 aa10.62□□□□□ -0.71
MMP28-205ENST00000615317 MYH15Q9Y2K3 1946 aa10.61□□□□□ -0.71
MMP28-205ENST00000615317 C19orf81C9J6K1 198 aa10.61□□□□□ -0.71
MMP28-205ENST00000615317 CXCL11O14625 94 aa10.61□□□□□ -0.71
MMP28-205ENST00000615317 DHX16O60231 1041 aaKnown RBP10.61□□□□□ -0.71
MMP28-205ENST00000615317 AOC2O75106 756 aa10.61□□□□□ -0.71
MMP28-205ENST00000615317 CDC27P30260 824 aa10.61□□□□□ -0.71
MMP28-205ENST00000615317 KIF5BP33176 963 aa10.61□□□□□ -0.71
MMP28-205ENST00000615317 SLC16A2P36021 539 aa10.61□□□□□ -0.71
MMP28-205ENST00000615317 MCM2P49736 904 aa10.61□□□□□ -0.71
MMP28-205ENST00000615317 GTF2A2P52657 109 aa10.61□□□□□ -0.71
MMP28-205ENST00000615317 RCAN1P53805 252 aa10.61□□□□□ -0.71
MMP28-205ENST00000615317 EVCP57679 992 aa10.61□□□□□ -0.71
MMP28-205ENST00000615317 C1QTNF8P60827 252 aa10.61□□□□□ -0.71
MMP28-205ENST00000615317 MOGSQ13724 837 aa10.61□□□□□ -0.71
MMP28-205ENST00000615317 TTBK2Q6IQ55 1244 aa10.61□□□□□ -0.71
MMP28-205ENST00000615317 TMTC3Q6ZXV5 915 aa10.61□□□□□ -0.71
MMP28-205ENST00000615317 PROCA1Q8NCQ7 364 aaPredicted RBP10.61□□□□□ -0.71
MMP28-205ENST00000615317 FBXO28Q9NVF7 368 aa10.61□□□□□ -0.71
MMP28-205ENST00000615317 AGTPBP1Q9UPW5 1226 aa10.61□□□□□ -0.71
MMP28-205ENST00000615317 SMCHD1A6NHR9 2005 aa10.6□□□□□ -0.71
MMP28-205ENST00000615317 MGAMO43451 1857 aa10.6□□□□□ -0.71
MMP28-205ENST00000615317 TMEM232C9JQI7 657 aa10.6□□□□□ -0.71
MMP28-205ENST00000615317 PFKFB2O60825 505 aa10.6□□□□□ -0.71
MMP28-205ENST00000615317 FLOT1O75955 427 aa10.6□□□□□ -0.71
MMP28-205ENST00000615317 CETPP11597 493 aa10.6□□□□□ -0.71
MMP28-205ENST00000615317 STAT2P52630 851 aa10.6□□□□□ -0.71
MMP28-205ENST00000615317 DEFB115Q30KQ5 88 aa10.6□□□□□ -0.71
MMP28-205ENST00000615317 FANCBQ8NB91 859 aa10.6□□□□□ -0.71
MMP28-205ENST00000615317 PIBF1Q8WXW3 757 aa10.6□□□□□ -0.71
MMP28-205ENST00000615317 SNX21Q969T3 373 aa10.6□□□□□ -0.71
MMP28-205ENST00000615317 CCDC102AQ96A19 550 aa10.6□□□□□ -0.71
MMP28-205ENST00000615317 ZNF274Q96GC6 653 aaPredicted RBP10.6□□□□□ -0.71
MMP28-205ENST00000615317 MS4A4AQ96JQ5 239 aa10.6□□□□□ -0.71
MMP28-205ENST00000615317 ZIC5Q96T25 663 aa10.6□□□□□ -0.71
MMP28-205ENST00000615317 SH2B1Q9NRF2 756 aaPredicted RBP10.6□□□□□ -0.71
MMP28-205ENST00000615317 RBM28Q9NW13 759 aaKnown RBP10.6□□□□□ -0.71
MMP28-205ENST00000615317 LCTP09848 1927 aa10.6□□□□□ -0.71
MMP28-205ENST00000615317 PTPDC1A2A3K4 754 aa10.59□□□□□ -0.71
MMP28-205ENST00000615317 PALM3A6NDB9 673 aaPredicted RBP10.59□□□□□ -0.71
MMP28-205ENST00000615317 MANSC4A6NHS7 340 aaPredicted RBP10.59□□□□□ -0.71
MMP28-205ENST00000615317 BTBD19C9JJ37 291 aa10.59□□□□□ -0.71
MMP28-205ENST00000615317 KLRF2D3W0D1 207 aa10.59□□□□□ -0.71
MMP28-205ENST00000615317 CPLX1O14810 134 aa10.59□□□□□ -0.71
MMP28-205ENST00000615317 JAK2O60674 1132 aa10.59□□□□□ -0.71
MMP28-205ENST00000615317 HSPA6P17066 643 aa10.59□□□□□ -0.71
MMP28-205ENST00000615317 TAL1P17542 331 aaPredicted RBP10.59□□□□□ -0.71
MMP28-205ENST00000615317 IRX3P78415 501 aaPredicted RBP10.59□□□□□ -0.71
MMP28-205ENST00000615317 SLC35G1Q2M3R5 365 aa10.59□□□□□ -0.71
MMP28-205ENST00000615317 GPATCH4Q5T3I0 446 aaKnown RBP10.59□□□□□ -0.71
MMP28-205ENST00000615317 SYDE2Q5VT97 1194 aa10.59□□□□□ -0.71
MMP28-205ENST00000615317 GPAT2Q6NUI2 795 aa10.59□□□□□ -0.71
MMP28-205ENST00000615317 FASTKD5Q7L8L6 764 aaKnown RBP10.59□□□□□ -0.71
MMP28-205ENST00000615317 NBPF11Q86T75 865 aa10.59□□□□□ -0.71
MMP28-205ENST00000615317 HOMER1Q86YM7 354 aa10.59□□□□□ -0.71
MMP28-205ENST00000615317 FAM43AQ8N2R8 423 aa10.59□□□□□ -0.71
MMP28-205ENST00000615317 CCDC82Q8N4S0 544 aa10.59□□□□□ -0.71
MMP28-205ENST00000615317 PHKBQ93100 1093 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms