RNA–Protein interactions for RNA: ENST00000615288.4

RDM1-218, Transcript of RAD52 motif containing 1, humanhuman

TSL 1 (best)

Gene RDM1, Length 587 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDM1-218ENST00000615288 CCDC70Q6NSX1 233 aa11.2□□□□□ -0.62
RDM1-218ENST00000615288 SRLQ86TD4 932 aa11.2□□□□□ -0.62
RDM1-218ENST00000615288 IQCA1Q86XH1 822 aa11.2□□□□□ -0.62
RDM1-218ENST00000615288 FAM114A1Q8IWE2 563 aa11.2□□□□□ -0.62
RDM1-218ENST00000615288 SLC35F6Q8N357 371 aa11.2□□□□□ -0.62
RDM1-218ENST00000615288 CCDC155Q8N6L0 562 aa11.2□□□□□ -0.62
RDM1-218ENST00000615288 NEK11Q8NG66 645 aa11.2□□□□□ -0.62
RDM1-218ENST00000615288 OR8K1Q8NGG5 319 aa11.2□□□□□ -0.62
RDM1-218ENST00000615288 SYTL4Q96C24 671 aaPredicted RBP11.2□□□□□ -0.62
RDM1-218ENST00000615288 ZSCAN10Q96SZ4 725 aaPredicted RBP11.2□□□□□ -0.62
RDM1-218ENST00000615288 ARMT1Q9H993 441 aa11.2□□□□□ -0.62
RDM1-218ENST00000615288 CABP5Q9NP86 173 aa11.2□□□□□ -0.62
RDM1-218ENST00000615288 CAPN11Q9UMQ6 739 aa11.2□□□□□ -0.62
RDM1-218ENST00000615288 SLC4A4Q9Y6R1 1079 aa11.2□□□□□ -0.62
RDM1-218ENST00000615288 CACNA1SQ13698 1873 aa11.2□□□□□ -0.62
RDM1-218ENST00000615288 TNRC6CQ9HCJ0 1690 aaKnown RBP11.2□□□□□ -0.62
RDM1-218ENST00000615288 ROBO1Q9Y6N7 1651 aa11.2□□□□□ -0.62
RDM1-218ENST00000615288 CNTNAP5Q8WYK1 1306 aa11.19□□□□□ -0.62
RDM1-218ENST00000615288 ATXN2Q99700 1313 aaKnown RBP11.19□□□□□ -0.62
RDM1-218ENST00000615288 KCNJ18B7U540 433 aa11.19□□□□□ -0.62
RDM1-218ENST00000615288 TEX33O43247 280 aa11.19□□□□□ -0.62
RDM1-218ENST00000615288 NDUFA10O95299 355 aa11.19□□□□□ -0.62
RDM1-218ENST00000615288 CYP19A1P11511 503 aaPredicted RBP11.19□□□□□ -0.62
RDM1-218ENST00000615288 CD44P16070 742 aaKnown RBP11.19□□□□□ -0.62
RDM1-218ENST00000615288 PRLRP16471 622 aa11.19□□□□□ -0.62
RDM1-218ENST00000615288 CAPN2P17655 700 aa11.19□□□□□ -0.62
RDM1-218ENST00000615288 CYLC1P35663 651 aaPredicted RBP11.19□□□□□ -0.62
RDM1-218ENST00000615288 PRPHP41219 470 aa11.19□□□□□ -0.62
RDM1-218ENST00000615288 LMAN1P49257 510 aa11.19□□□□□ -0.62
RDM1-218ENST00000615288 DNM2P50570 870 aa11.19□□□□□ -0.62
RDM1-218ENST00000615288 FXR1P51114 621 aaKnown RBP eCLIP11.19□□□□□ -0.62
RDM1-218ENST00000615288 USP14P54578 494 aa11.19□□□□□ -0.62
RDM1-218ENST00000615288 ERVK-24P63145 666 aa11.19□□□□□ -0.62
RDM1-218ENST00000615288 ST5P78524 1137 aa11.19□□□□□ -0.62
RDM1-218ENST00000615288 CTDSPL2Q05D32 466 aa11.19□□□□□ -0.62
RDM1-218ENST00000615288 GOLGA8FQ08AF8 430 aa11.19□□□□□ -0.62
RDM1-218ENST00000615288 GOLGA8DPQ0D2H9 430 aa11.19□□□□□ -0.62
RDM1-218ENST00000615288 KCNJ12Q14500 433 aa11.19□□□□□ -0.62
RDM1-218ENST00000615288 MTF1Q14872 753 aa11.19□□□□□ -0.62
RDM1-218ENST00000615288 CCDC152Q4G0S7 254 aa11.19□□□□□ -0.62
RDM1-218ENST00000615288 GBP6Q6ZN66 633 aa11.19□□□□□ -0.62
RDM1-218ENST00000615288 DNAJC10Q8IXB1 793 aa11.19□□□□□ -0.62
RDM1-218ENST00000615288 LCORLQ8N3X6 602 aa11.19□□□□□ -0.62
RDM1-218ENST00000615288 DAGLBQ8NCG7 672 aa11.19□□□□□ -0.62
RDM1-218ENST00000615288 PNKPQ96T60 521 aa11.19□□□□□ -0.62
RDM1-218ENST00000615288 MYL10Q9BUA6 226 aa11.19□□□□□ -0.62
RDM1-218ENST00000615288 PDE11AQ9HCR9 933 aa11.19□□□□□ -0.62
RDM1-218ENST00000615288 LZTFL1Q9NQ48 299 aa11.19□□□□□ -0.62
RDM1-218ENST00000615288 GNL3LQ9NVN8 582 aaKnown RBP11.19□□□□□ -0.62
RDM1-218ENST00000615288 TRMT112Q9UI30 125 aaKnown RBP11.19□□□□□ -0.62
RDM1-218ENST00000615288 DENND2AQ9ULE3 1009 aa11.19□□□□□ -0.62
RDM1-218ENST00000615288 CTNND2Q9UQB3 1225 aa11.19□□□□□ -0.62
RDM1-218ENST00000615288 A0A087X0B3 334 aa11.18□□□□□ -0.62
RDM1-218ENST00000615288 EIF3CLB5ME19 914 aaKnown RBP11.18□□□□□ -0.62
RDM1-218ENST00000615288 KRT86O43790 486 aa11.18□□□□□ -0.62
RDM1-218ENST00000615288 SHOX2O60902 331 aaPredicted RBP11.18□□□□□ -0.62
RDM1-218ENST00000615288 IPO7O95373 1038 aaKnown RBP11.18□□□□□ -0.62
RDM1-218ENST00000615288 TNFRSF8P28908 595 aa11.18□□□□□ -0.62
RDM1-218ENST00000615288 KIF5BP33176 963 aa11.18□□□□□ -0.62
RDM1-218ENST00000615288 KRT9P35527 623 aa11.18□□□□□ -0.62
RDM1-218ENST00000615288 TROAPQ12815 778 aa11.18□□□□□ -0.62
RDM1-218ENST00000615288 NPY5RQ15761 445 aa11.18□□□□□ -0.62
RDM1-218ENST00000615288 IFIT1BQ5T764 474 aaKnown RBP11.18□□□□□ -0.62
RDM1-218ENST00000615288 WWC2Q6AWC2 1192 aa11.18□□□□□ -0.62
RDM1-218ENST00000615288 ADSSL1Q8N142 457 aa11.18□□□□□ -0.62
RDM1-218ENST00000615288 ENAHQ8N8S7 591 aaPredicted RBP11.18□□□□□ -0.62
RDM1-218ENST00000615288 NKX2-3Q8TAU0 364 aa11.18□□□□□ -0.62
RDM1-218ENST00000615288 OXER1Q8TDS5 423 aa11.18□□□□□ -0.62
RDM1-218ENST00000615288 CCDC47Q96A33 483 aaKnown RBP11.18□□□□□ -0.62
RDM1-218ENST00000615288 DHTKD1Q96HY7 919 aaPredicted RBP11.18□□□□□ -0.62
RDM1-218ENST00000615288 AK8Q96MA6 479 aa11.18□□□□□ -0.62
RDM1-218ENST00000615288 PURBQ96QR8 312 aaKnown RBP11.18□□□□□ -0.62
RDM1-218ENST00000615288 EIF3CQ99613 913 aaKnown RBP11.18□□□□□ -0.62
RDM1-218ENST00000615288 ABCB6Q9NP58 842 aa11.18□□□□□ -0.62
RDM1-218ENST00000615288 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.18□□□□□ -0.62
RDM1-218ENST00000615288 LUC7L2Q9Y383 392 aaKnown RBP11.18□□□□□ -0.62
RDM1-218ENST00000615288 EPN1Q9Y6I3 576 aaPredicted RBP11.18□□□□□ -0.62
RDM1-218ENST00000615288 SLIT2O94813 1529 aa11.18□□□□□ -0.62
RDM1-218ENST00000615288 MAGEB6P1A0A0J9YX57 407 aa11.17□□□□□ -0.62
RDM1-218ENST00000615288 BICDL2A1A5D9 508 aa11.17□□□□□ -0.62
RDM1-218ENST00000615288 MYO1CO00159 1063 aa11.17□□□□□ -0.62
RDM1-218ENST00000615288 PSMA7O14818 248 aa11.17□□□□□ -0.62
RDM1-218ENST00000615288 RHOBTB3O94955 611 aa11.17□□□□□ -0.62
RDM1-218ENST00000615288 CPP00450 1065 aa11.17□□□□□ -0.62
RDM1-218ENST00000615288 RPN1P04843 607 aaKnown RBP11.17□□□□□ -0.62
RDM1-218ENST00000615288 SCG2P13521 617 aa11.17□□□□□ -0.62
RDM1-218ENST00000615288 HNRNPH3P31942 346 aaKnown RBP11.17□□□□□ -0.62
RDM1-218ENST00000615288 VSNL1P62760 191 aa11.17□□□□□ -0.62
RDM1-218ENST00000615288 PFKFB3Q16875 520 aaPredicted RBP11.17□□□□□ -0.62
RDM1-218ENST00000615288 RRAGBQ5VZM2 374 aa11.17□□□□□ -0.62
RDM1-218ENST00000615288 GRAMD1CQ8IYS0 662 aa11.17□□□□□ -0.62
RDM1-218ENST00000615288 MB21D1Q8N884 522 aa11.17□□□□□ -0.62
RDM1-218ENST00000615288 NELFBQ8WX92 580 aa11.17□□□□□ -0.62
RDM1-218ENST00000615288 NUP88Q99567 741 aaPredicted RBP11.17□□□□□ -0.62
RDM1-218ENST00000615288 CCSER1Q9C0I3 900 aa11.17□□□□□ -0.62
RDM1-218ENST00000615288 SEC31BQ9NQW1 1179 aa11.17□□□□□ -0.62
RDM1-218ENST00000615288 VPS18Q9P253 973 aa11.17□□□□□ -0.62
RDM1-218ENST00000615288 RRP15Q9Y3B9 282 aaKnown RBP11.17□□□□□ -0.62
RDM1-218ENST00000615288 TACC3Q9Y6A5 838 aa11.17□□□□□ -0.62
RDM1-218ENST00000615288 SAR1BQ9Y6B6 198 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms