RNA–Protein interactions for RNA: ENST00000614944.4

VPS11-206, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2 BASIC

Gene VPS11, Length 3,388 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-206ENST00000614944 LARGE2Q8N3Y3 721 aa10.02□□□□□ -0.81
VPS11-206ENST00000614944 KCNV2Q8TDN2 545 aa10.02□□□□□ -0.81
VPS11-206ENST00000614944 HDAC9Q9UKV0 1011 aa10.02□□□□□ -0.81
VPS11-206ENST00000614944 SYNPO2Q9UMS6 1093 aa10.02□□□□□ -0.81
VPS11-206ENST00000614944 TACC3Q9Y6A5 838 aa10.02□□□□□ -0.81
VPS11-206ENST00000614944 BRD1O95696 1058 aa10.01□□□□□ -0.81
VPS11-206ENST00000614944 OATP04181 439 aa10.01□□□□□ -0.81
VPS11-206ENST00000614944 SEC23AQ15436 765 aa10.01□□□□□ -0.81
VPS11-206ENST00000614944 PDCD2Q16342 344 aaPredicted RBP10.01□□□□□ -0.81
VPS11-206ENST00000614944 TEX11Q8IYF3 940 aa10.01□□□□□ -0.81
VPS11-206ENST00000614944 SDR42E1Q8WUS8 393 aa10.01□□□□□ -0.81
VPS11-206ENST00000614944 SPATS2LQ9NUQ6 558 aaKnown RBP10.01□□□□□ -0.81
VPS11-206ENST00000614944 PCDHGA4Q9Y5G9 962 aa10.01□□□□□ -0.81
VPS11-206ENST00000614944 WDHD1O75717 1129 aaPredicted RBP10.01□□□□□ -0.81
VPS11-206ENST00000614944 TBC1D8BQ0IIM8 1120 aa10.01□□□□□ -0.81
VPS11-206ENST00000614944 ST3GAL1Q11201 340 aa10.01□□□□□ -0.81
VPS11-206ENST00000614944 RBBP5Q15291 538 aaKnown RBP10.01□□□□□ -0.81
VPS11-206ENST00000614944 DIXDC1Q155Q3 683 aa10.01□□□□□ -0.81
VPS11-206ENST00000614944 TTC6Q86TZ1 520 aa10.01□□□□□ -0.81
VPS11-206ENST00000614944 LY9Q9HBG7 655 aa10.01□□□□□ -0.81
VPS11-206ENST00000614944 STK36Q9NRP7 1315 aa10.01□□□□□ -0.81
VPS11-206ENST00000614944 SMTNL1A8MU46 457 aa10.01□□□□□ -0.81
VPS11-206ENST00000614944 USP8P40818 1118 aa10.01□□□□□ -0.81
VPS11-206ENST00000614944 USP5P45974 858 aa10.01□□□□□ -0.81
VPS11-206ENST00000614944 CDC42EP5Q6NZY7 148 aa10.01□□□□□ -0.81
VPS11-206ENST00000614944 USP17L12C9JPN9 530 aa10□□□□□ -0.81
VPS11-206ENST00000614944 USP17L21D6R901 530 aa10□□□□□ -0.81
VPS11-206ENST00000614944 CALM1P0DP23 149 aa10□□□□□ -0.81
VPS11-206ENST00000614944 CALM2P0DP24 149 aa10□□□□□ -0.81
VPS11-206ENST00000614944 CALM3P0DP25 149 aa10□□□□□ -0.81
VPS11-206ENST00000614944 RPS6KA3P51812 740 aa10□□□□□ -0.81
VPS11-206ENST00000614944 CYB5R4Q7L1T6 521 aa10□□□□□ -0.81
VPS11-206ENST00000614944 DGKHQ86XP1 1220 aa10□□□□□ -0.81
VPS11-206ENST00000614944 RNF214Q8ND24 703 aa10□□□□□ -0.81
VPS11-206ENST00000614944 TRIM6Q9C030 488 aaPredicted RBP10□□□□□ -0.81
VPS11-206ENST00000614944 OSBPL5Q9H0X9 879 aaPredicted RBP10□□□□□ -0.81
VPS11-206ENST00000614944 ZSWIM5Q9P217 1185 aa10□□□□□ -0.81
VPS11-206ENST00000614944 DDAH1O94760 285 aa10□□□□□ -0.81
VPS11-206ENST00000614944 PDCP20941 246 aa10□□□□□ -0.81
VPS11-206ENST00000614944 PDIA3P30101 505 aaKnown RBP10□□□□□ -0.81
VPS11-206ENST00000614944 TBC1D25Q3MII6 688 aa10□□□□□ -0.81
VPS11-206ENST00000614944 FOXD4L5Q5VV16 416 aaPredicted RBP10□□□□□ -0.81
VPS11-206ENST00000614944 CIAPIN1Q6FI81 312 aa10□□□□□ -0.81
VPS11-206ENST00000614944 FOXD4L4Q8WXT5 416 aaPredicted RBP10□□□□□ -0.81
VPS11-206ENST00000614944 PSDA5PKW4 1024 aaPredicted RBP10□□□□□ -0.81
VPS11-206ENST00000614944 TMCO5BA8MYB1 307 aa10□□□□□ -0.81
VPS11-206ENST00000614944 FAM83AQ86UY5 434 aa10□□□□□ -0.81
VPS11-206ENST00000614944 ARPC5LQ9BPX5 153 aa10□□□□□ -0.81
VPS11-206ENST00000614944 TTC12Q9H892 705 aaPredicted RBP10□□□□□ -0.81
VPS11-206ENST00000614944 ZNF277Q9NRM2 450 aaPredicted RBP10□□□□□ -0.81
VPS11-206ENST00000614944 EIF3CLB5ME19 914 aaKnown RBP9.99□□□□□ -0.81
VPS11-206ENST00000614944 PSMD14O00487 310 aa9.99□□□□□ -0.81
VPS11-206ENST00000614944 ECM2O94769 699 aaPredicted RBP9.99□□□□□ -0.81
VPS11-206ENST00000614944 MAP3K10Q02779 954 aa9.99□□□□□ -0.81
VPS11-206ENST00000614944 CTDSPL2Q05D32 466 aa9.99□□□□□ -0.81
VPS11-206ENST00000614944 ZRSR1Q15695 479 aaKnown RBP9.99□□□□□ -0.81
VPS11-206ENST00000614944 JDP2Q8WYK2 163 aa9.99□□□□□ -0.81
VPS11-206ENST00000614944 EIF3CQ99613 913 aaKnown RBP9.99□□□□□ -0.81
VPS11-206ENST00000614944 MCM9Q9NXL9 1143 aa9.99□□□□□ -0.81
VPS11-206ENST00000614944 V9GYY5 206 aaPredicted RBP9.99□□□□□ -0.81
VPS11-206ENST00000614944 SPDYE2BA6NHP3 402 aa9.99□□□□□ -0.81
VPS11-206ENST00000614944 TBC1D12O60347 775 aa9.99□□□□□ -0.81
VPS11-206ENST00000614944 CPP00450 1065 aa9.99□□□□□ -0.81
VPS11-206ENST00000614944 IVLP07476 585 aa9.99□□□□□ -0.81
VPS11-206ENST00000614944 SPDYE6P0CI01 402 aa9.99□□□□□ -0.81
VPS11-206ENST00000614944 HAND2P61296 217 aa9.99□□□□□ -0.81
VPS11-206ENST00000614944 LRSAM1Q6UWE0 723 aa9.99□□□□□ -0.81
VPS11-206ENST00000614944 ZNF483Q8TF39 744 aaPredicted RBP9.99□□□□□ -0.81
VPS11-206ENST00000614944 BRF1Q92994 677 aa9.99□□□□□ -0.81
VPS11-206ENST00000614944 GINM1Q9NU53 330 aa9.99□□□□□ -0.81
VPS11-206ENST00000614944 USP40Q9NVE5 1235 aa9.99□□□□□ -0.81
VPS11-206ENST00000614944 HPS5Q9UPZ3 1129 aa9.99□□□□□ -0.81
VPS11-206ENST00000614944 IGKV6D-41A0A0C4DH26 115 aa9.98□□□□□ -0.81
VPS11-206ENST00000614944 RBM47A0AV96 593 aaKnown RBP9.98□□□□□ -0.81
VPS11-206ENST00000614944 CPA1P15085 419 aa9.98□□□□□ -0.81
VPS11-206ENST00000614944 SPDYE2Q495Y8 402 aa9.98□□□□□ -0.81
VPS11-206ENST00000614944 CCDC181Q5TID7 509 aa9.98□□□□□ -0.81
VPS11-206ENST00000614944 FOXP4Q8IVH2 680 aaPredicted RBP9.98□□□□□ -0.81
VPS11-206ENST00000614944 IQUBQ8NA54 791 aa9.98□□□□□ -0.81
VPS11-206ENST00000614944 TGFBRAP1Q8WUH2 860 aa9.98□□□□□ -0.81
VPS11-206ENST00000614944 ZSCAN10Q96SZ4 725 aaPredicted RBP9.98□□□□□ -0.81
VPS11-206ENST00000614944 CRACR2AQ9BSW2 395 aa9.98□□□□□ -0.81
VPS11-206ENST00000614944 BIN2Q9UBW5 565 aaPredicted RBP9.98□□□□□ -0.81
VPS11-206ENST00000614944 MTMR7Q9Y216 660 aa9.98□□□□□ -0.81
VPS11-206ENST00000614944 B4E1Z4 1266 aa9.98□□□□□ -0.81
VPS11-206ENST00000614944 CDKL5O76039 1030 aa9.98□□□□□ -0.81
VPS11-206ENST00000614944 LARGE1O95461 756 aa9.98□□□□□ -0.81
VPS11-206ENST00000614944 SMARCA1P28370 1054 aa9.98□□□□□ -0.81
VPS11-206ENST00000614944 CXCL9Q07325 125 aa9.98□□□□□ -0.81
VPS11-206ENST00000614944 RBM26Q5T8P6 1007 aaKnown RBP9.98□□□□□ -0.81
VPS11-206ENST00000614944 GBP6Q6ZN66 633 aa9.98□□□□□ -0.81
VPS11-206ENST00000614944 IQCA1Q86XH1 822 aa9.98□□□□□ -0.81
VPS11-206ENST00000614944 EFCAB13Q8IY85 973 aa9.98□□□□□ -0.81
VPS11-206ENST00000614944 NEDD1Q8NHV4 660 aa9.98□□□□□ -0.81
VPS11-206ENST00000614944 CCDC17Q96LX7 622 aa9.98□□□□□ -0.81
VPS11-206ENST00000614944 LZTS2Q9BRK4 669 aa9.98□□□□□ -0.81
VPS11-206ENST00000614944 SUN2Q9UH99 717 aa9.98□□□□□ -0.81
VPS11-206ENST00000614944 WDR33Q9C0J8 1336 aaKnown RBP9.98□□□□□ -0.81
VPS11-206ENST00000614944 PAPPA2Q9BXP8 1791 aa9.98□□□□□ -0.81
VPS11-206ENST00000614944 ERICH2A1L162 156 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms