RNA–Protein interactions for RNA: ENST00000614703.4

SNX9-202, Transcript of sorting nexin 9, humanhuman

TSL 4

Gene SNX9, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9-202ENST00000614703 MMP19Q99542 508 aa11.7□□□□□ -0.54
SNX9-202ENST00000614703 ARHGEF10LQ9HCE6 1279 aa11.7□□□□□ -0.54
SNX9-202ENST00000614703 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.7□□□□□ -0.54
SNX9-202ENST00000614703 FPGT-TNNI3KV9GXZ4 949 aa11.7□□□□□ -0.54
SNX9-202ENST00000614703 CHD9Q3L8U1 2897 aa11.69□□□□□ -0.54
SNX9-202ENST00000614703 ELP1O95163 1332 aa11.69□□□□□ -0.54
SNX9-202ENST00000614703 MYH8P13535 1937 aa11.69□□□□□ -0.54
SNX9-202ENST00000614703 IPO8O15397 1037 aaKnown RBP11.69□□□□□ -0.54
SNX9-202ENST00000614703 PGK1P00558 417 aa11.69□□□□□ -0.54
SNX9-202ENST00000614703 ZAP70P43403 619 aa11.69□□□□□ -0.54
SNX9-202ENST00000614703 ACLYP53396 1101 aa11.69□□□□□ -0.54
SNX9-202ENST00000614703 SEPT2Q15019 361 aa11.69□□□□□ -0.54
SNX9-202ENST00000614703 TMEM179Q6ZVK1 233 aa11.69□□□□□ -0.54
SNX9-202ENST00000614703 MAGEB6Q8N7X4 407 aa11.69□□□□□ -0.54
SNX9-202ENST00000614703 MIGA1Q8NAN2 632 aa11.69□□□□□ -0.54
SNX9-202ENST00000614703 PCSK9Q8NBP7 692 aaKnown RBP11.69□□□□□ -0.54
SNX9-202ENST00000614703 GLT1D1Q96MS3 346 aa11.69□□□□□ -0.54
SNX9-202ENST00000614703 DBNDD2Q9BQY9 259 aa11.69□□□□□ -0.54
SNX9-202ENST00000614703 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.69□□□□□ -0.546e-8■■■■□ 19.3
SNX9-202ENST00000614703 PBX4Q9BYU1 374 aa11.69□□□□□ -0.54
SNX9-202ENST00000614703 SPC25Q9HBM1 224 aa11.69□□□□□ -0.54
SNX9-202ENST00000614703 WDR46O15213 610 aaKnown RBP11.68□□□□□ -0.54
SNX9-202ENST00000614703 TLR3O15455 904 aaKnown RBP11.68□□□□□ -0.54
SNX9-202ENST00000614703 IGFBP4P22692 258 aa11.68□□□□□ -0.54
SNX9-202ENST00000614703 HOXD11P31277 338 aaPredicted RBP11.68□□□□□ -0.54
SNX9-202ENST00000614703 TMEM240Q5SV17 173 aa11.68□□□□□ -0.54
SNX9-202ENST00000614703 PRDM12Q9H4Q4 367 aa11.68□□□□□ -0.54
SNX9-202ENST00000614703 SLC28A3Q9HAS3 691 aa11.68□□□□□ -0.54
SNX9-202ENST00000614703 PIH1D3Q9NQM4 214 aaKnown RBP11.68□□□□□ -0.54
SNX9-202ENST00000614703 SWAP70Q9UH65 585 aa11.68□□□□□ -0.54
SNX9-202ENST00000614703 TBX21Q9UL17 535 aa11.68□□□□□ -0.54
SNX9-202ENST00000614703 FAM184BQ9ULE4 1060 aa11.68□□□□□ -0.54
SNX9-202ENST00000614703 HCN4Q9Y3Q4 1203 aa11.68□□□□□ -0.54
SNX9-202ENST00000614703 NAV1Q8NEY1 1877 aa11.68□□□□□ -0.54
SNX9-202ENST00000614703 APBB1O00213 710 aa11.67□□□□□ -0.54
SNX9-202ENST00000614703 ADAMTS4O75173 837 aa11.67□□□□□ -0.54
SNX9-202ENST00000614703 GUCY1A2P33402 732 aa11.67□□□□□ -0.54
SNX9-202ENST00000614703 PLCD1P51178 756 aa11.67□□□□□ -0.54
SNX9-202ENST00000614703 GABPAQ06546 454 aa11.67□□□□□ -0.54
SNX9-202ENST00000614703 RASIP1Q5U651 963 aa11.67□□□□□ -0.54
SNX9-202ENST00000614703 RIOX2Q8IUF8 465 aa11.67□□□□□ -0.54
SNX9-202ENST00000614703 VTI1AQ96AJ9 217 aa11.67□□□□□ -0.54
SNX9-202ENST00000614703 ATG4CQ96DT6 458 aa11.67□□□□□ -0.54
SNX9-202ENST00000614703 CRNKL1Q9BZJ0 848 aaKnown RBP11.67□□□□□ -0.54
SNX9-202ENST00000614703 VCPKMTQ9H867 229 aa11.67□□□□□ -0.54
SNX9-202ENST00000614703 CXXC1Q9P0U4 656 aaPredicted RBP11.67□□□□□ -0.54
SNX9-202ENST00000614703 RAPGEFL1Q9UHV5 662 aa11.67□□□□□ -0.54
SNX9-202ENST00000614703 SYNGAP1Q96PV0 1343 aa11.66□□□□□ -0.54
SNX9-202ENST00000614703 COL11A1P12107 1806 aaPredicted RBP11.66□□□□□ -0.54
SNX9-202ENST00000614703 PARP14Q460N5 1801 aa11.66□□□□□ -0.54
SNX9-202ENST00000614703 PNMA6EA0A0J9YXQ4 647 aa11.66□□□□□ -0.54
SNX9-202ENST00000614703 A0A1W2PRG0 241 aa11.66□□□□□ -0.54
SNX9-202ENST00000614703 DUSP11O75319 330 aaKnown RBP11.66□□□□□ -0.54
SNX9-202ENST00000614703 ZNF865P0CJ78 1059 aaPredicted RBP11.66□□□□□ -0.54
SNX9-202ENST00000614703 TMEM132BQ14DG7 1078 aa11.66□□□□□ -0.54
SNX9-202ENST00000614703 CCDC85BQ15834 202 aaPredicted RBP11.66□□□□□ -0.54
SNX9-202ENST00000614703 KCNA10Q16322 511 aa11.66□□□□□ -0.54
SNX9-202ENST00000614703 ZNF792Q3KQV3 632 aa11.66□□□□□ -0.54
SNX9-202ENST00000614703 TRMT2AQ8IZ69 625 aaKnown RBP11.66□□□□□ -0.54
SNX9-202ENST00000614703 KLHDC9Q8NEP7 349 aa11.66□□□□□ -0.54
SNX9-202ENST00000614703 MCM9Q9NXL9 1143 aa11.66□□□□□ -0.54
SNX9-202ENST00000614703 TMX2Q9Y320 296 aa11.66□□□□□ -0.54
SNX9-202ENST00000614703 XIRP2A4UGR9 3374 aa11.66□□□□□ -0.54
SNX9-202ENST00000614703 SYNRGQ9UMZ2 1314 aa11.65□□□□□ -0.54
SNX9-202ENST00000614703 MAGEB6P1A0A0J9YX57 407 aa11.65□□□□□ -0.54
SNX9-202ENST00000614703 A0A0U1RQG5 324 aaPredicted RBP11.65□□□□□ -0.54
SNX9-202ENST00000614703 SURF6O75683 361 aaKnown RBP11.65□□□□□ -0.54
SNX9-202ENST00000614703 PGK2P07205 417 aa11.65□□□□□ -0.54
SNX9-202ENST00000614703 CST5P28325 142 aaPredicted RBP11.65□□□□□ -0.54
SNX9-202ENST00000614703 PBX2P40425 430 aa11.65□□□□□ -0.54
SNX9-202ENST00000614703 STAT3P40763 770 aa11.65□□□□□ -0.54
SNX9-202ENST00000614703 ICA1Q05084 483 aa11.65□□□□□ -0.54
SNX9-202ENST00000614703 TTF1Q15361 905 aaPredicted RBP11.65□□□□□ -0.54
SNX9-202ENST00000614703 SAMD1Q6SPF0 538 aaPredicted RBP11.65□□□□□ -0.54
SNX9-202ENST00000614703 ZNF365Q70YC5 407 aa11.65□□□□□ -0.54
SNX9-202ENST00000614703 AMOTL1Q8IY63 956 aa11.65□□□□□ -0.54
SNX9-202ENST00000614703 HERVK_113Q902F9 699 aa11.65□□□□□ -0.54
SNX9-202ENST00000614703 CCDC17Q96LX7 622 aa11.65□□□□□ -0.54
SNX9-202ENST00000614703 SEZ6LQ9BYH1 1024 aa11.65□□□□□ -0.54
SNX9-202ENST00000614703 IL23AQ9NPF7 189 aa11.65□□□□□ -0.54
SNX9-202ENST00000614703 TRANK1O15050 2925 aa11.65□□□□□ -0.54
SNX9-202ENST00000614703 CHD7Q9P2D1 2997 aa11.64□□□□□ -0.55
SNX9-202ENST00000614703 ARVCFO00192 962 aa11.64□□□□□ -0.55
SNX9-202ENST00000614703 FGBP02675 491 aa11.64□□□□□ -0.55
SNX9-202ENST00000614703 C6orf222P0C671 652 aaPredicted RBP11.64□□□□□ -0.55
SNX9-202ENST00000614703 CSF2RAP15509 400 aa11.64□□□□□ -0.55
SNX9-202ENST00000614703 CDK7P50613 346 aa11.64□□□□□ -0.55
SNX9-202ENST00000614703 RARSP54136 660 aaKnown RBP11.64□□□□□ -0.55
SNX9-202ENST00000614703 POLA2Q14181 598 aa11.64□□□□□ -0.55
SNX9-202ENST00000614703 SPICE1Q8N0Z3 855 aa11.64□□□□□ -0.55
SNX9-202ENST00000614703 DDX11Q96FC9 970 aa11.64□□□□□ -0.55
SNX9-202ENST00000614703 RIOK1Q9BRS2 568 aaKnown RBP11.64□□□□□ -0.55
SNX9-202ENST00000614703 GOPCQ9HD26 462 aa11.64□□□□□ -0.55
SNX9-202ENST00000614703 DBNLQ9UJU6 430 aaKnown RBP11.64□□□□□ -0.55
SNX9-202ENST00000614703 ZHX1Q9UKY1 873 aaPredicted RBP11.64□□□□□ -0.55
SNX9-202ENST00000614703 ADAMTS5Q9UNA0 930 aa11.64□□□□□ -0.55
SNX9-202ENST00000614703 TCF20Q9UGU0 1960 aaKnown RBP11.64□□□□□ -0.55
SNX9-202ENST00000614703 PIEZO1Q92508 2521 aa11.64□□□□□ -0.55
SNX9-202ENST00000614703 GRXCR1A8MXD5 290 aa11.63□□□□□ -0.55
SNX9-202ENST00000614703 GTPBP6O43824 516 aaPredicted RBP11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms