RNA–Protein interactions for RNA: ENST00000614547.4

CDH5-208, Transcript of cadherin 5, humanhuman

TSL 1 (best) BASIC

Gene CDH5, Length 3,779 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-208ENST00000614547 E7EVH7 732 aa13.18□□□□□ -0.3
CDH5-208ENST00000614547 ERCC5P28715 1186 aaPredicted RBP13.18□□□□□ -0.3
CDH5-208ENST00000614547 MCAMP43121 646 aa13.18□□□□□ -0.3
CDH5-208ENST00000614547 VAV2P52735 878 aa13.18□□□□□ -0.3
CDH5-208ENST00000614547 PRPF4BQ13523 1007 aaKnown RBP13.18□□□□□ -0.3
CDH5-208ENST00000614547 AKNAD1Q5T1N1 836 aa13.18□□□□□ -0.3
CDH5-208ENST00000614547 EHD2Q9NZN4 543 aa13.18□□□□□ -0.3
CDH5-208ENST00000614547 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.18□□□□□ -0.3
CDH5-208ENST00000614547 CDC42BPGQ6DT37 1551 aa13.18□□□□□ -0.3
CDH5-208ENST00000614547 TTC26A0AVF1 554 aa13.18□□□□□ -0.3
CDH5-208ENST00000614547 PHKG2P15735 406 aa13.18□□□□□ -0.3
CDH5-208ENST00000614547 IFT88Q13099 833 aa13.18□□□□□ -0.3
CDH5-208ENST00000614547 E2F5Q15329 346 aa13.18□□□□□ -0.3
CDH5-208ENST00000614547 ESR2Q92731 530 aa13.18□□□□□ -0.3
CDH5-208ENST00000614547 TRIM31Q9BZY9 425 aa13.18□□□□□ -0.3
CDH5-208ENST00000614547 TLDC2A0PJX2 215 aa13.17□□□□□ -0.3
CDH5-208ENST00000614547 NF2P35240 595 aa13.17□□□□□ -0.3
CDH5-208ENST00000614547 MEX3CQ5U5Q3 659 aaKnown RBP13.17□□□□□ -0.3
CDH5-208ENST00000614547 FAM212AQ96EL1 285 aa13.17□□□□□ -0.3
CDH5-208ENST00000614547 HSD3B7Q9H2F3 369 aa13.17□□□□□ -0.3
CDH5-208ENST00000614547 GREM2Q9H772 168 aa13.17□□□□□ -0.3
CDH5-208ENST00000614547 EXOC1Q9NV70 894 aa13.17□□□□□ -0.3
CDH5-208ENST00000614547 LRWD1Q9UFC0 647 aa13.17□□□□□ -0.3
CDH5-208ENST00000614547 TUBBP07437 444 aa13.17□□□□□ -0.3
CDH5-208ENST00000614547 ERVK-24P63145 666 aa13.17□□□□□ -0.3
CDH5-208ENST00000614547 IFFO1Q0D2I5 559 aa13.17□□□□□ -0.3
CDH5-208ENST00000614547 FAM47AQ5JRC9 791 aa13.17□□□□□ -0.3
CDH5-208ENST00000614547 RNF41Q9H4P4 317 aaPredicted RBP13.17□□□□□ -0.3
CDH5-208ENST00000614547 CNNM2Q9H8M5 875 aa13.17□□□□□ -0.3
CDH5-208ENST00000614547 SEC31BQ9NQW1 1179 aa13.17□□□□□ -0.3
CDH5-208ENST00000614547 DUSP10Q9Y6W6 482 aa13.17□□□□□ -0.3
CDH5-208ENST00000614547 TSPY2A6NKD2 308 aa13.17□□□□□ -0.3
CDH5-208ENST00000614547 PARP1P09874 1014 aaKnown RBP13.17□□□□□ -0.3
CDH5-208ENST00000614547 SLC5A1P13866 664 aa13.17□□□□□ -0.3
CDH5-208ENST00000614547 ACTN3Q08043 901 aaPredicted RBP13.17□□□□□ -0.3
CDH5-208ENST00000614547 ZCRB1Q8TBF4 217 aaKnown RBP13.17□□□□□ -0.3
CDH5-208ENST00000614547 HAUS4Q9H6D7 363 aa13.17□□□□□ -0.3
CDH5-208ENST00000614547 IRS4O14654 1257 aaPredicted RBP13.16□□□□□ -0.3
CDH5-208ENST00000614547 NCK2O43639 380 aa13.16□□□□□ -0.3
CDH5-208ENST00000614547 MOCS3O95396 460 aa13.16□□□□□ -0.3
CDH5-208ENST00000614547 USP5P45974 858 aa13.16□□□□□ -0.3
CDH5-208ENST00000614547 PDE4DQ08499 809 aa13.16□□□□□ -0.3
CDH5-208ENST00000614547 MMS22LQ6ZRQ5 1243 aa13.16□□□□□ -0.3
CDH5-208ENST00000614547 HEATR3Q7Z4Q2 680 aa13.16□□□□□ -0.3
CDH5-208ENST00000614547 CCDC43Q96MW1 224 aaKnown RBP13.16□□□□□ -0.3
CDH5-208ENST00000614547 IFIH1Q9BYX4 1025 aaKnown RBP13.16□□□□□ -0.3
CDH5-208ENST00000614547 SEPT11Q9NVA2 429 aaKnown RBP13.16□□□□□ -0.3
CDH5-208ENST00000614547 FBXO2Q9UK22 296 aaPredicted RBP13.16□□□□□ -0.3
CDH5-208ENST00000614547 ADGRL3Q9HAR2 1447 aa13.16□□□□□ -0.3
CDH5-208ENST00000614547 A0A1B0GTH6 734 aa13.16□□□□□ -0.3
CDH5-208ENST00000614547 FOXO4P98177 505 aa13.16□□□□□ -0.3
CDH5-208ENST00000614547 EZH2Q15910 746 aaKnown RBP13.16□□□□□ -0.3
CDH5-208ENST00000614547 CCDC121Q6ZUS5 278 aa13.16□□□□□ -0.3
CDH5-208ENST00000614547 MICALCLQ6ZW33 695 aa13.16□□□□□ -0.3
CDH5-208ENST00000614547 TMEM139Q8IV31 216 aa13.16□□□□□ -0.3
CDH5-208ENST00000614547 PROCA1Q8NCQ7 364 aaPredicted RBP13.16□□□□□ -0.3
CDH5-208ENST00000614547 DCAF5Q96JK2 942 aa13.16□□□□□ -0.3
CDH5-208ENST00000614547 MLXIPQ9HAP2 919 aa13.16□□□□□ -0.3
CDH5-208ENST00000614547 RMND1Q9NWS8 449 aa13.16□□□□□ -0.3
CDH5-208ENST00000614547 MAGEA1P43355 309 aa13.16□□□□□ -0.3
CDH5-208ENST00000614547 GUCY2DQ02846 1103 aa13.16□□□□□ -0.3
CDH5-208ENST00000614547 SPTY2D1Q68D10 685 aaPredicted RBP13.16□□□□□ -0.3
CDH5-208ENST00000614547 TRIML1Q8N9V2 468 aa13.16□□□□□ -0.3
CDH5-208ENST00000614547 GPKOWQ92917 476 aaPredicted RBP eCLIP13.16□□□□□ -0.3
CDH5-208ENST00000614547 ADD3Q9UEY8 706 aaKnown RBP13.16□□□□□ -0.3
CDH5-208ENST00000614547 STX8Q9UNK0 236 aa13.16□□□□□ -0.3
CDH5-208ENST00000614547 HPSEQ9Y251 543 aa13.16□□□□□ -0.3
CDH5-208ENST00000614547 SRPRBQ9Y5M8 271 aaKnown RBP13.16□□□□□ -0.3
CDH5-208ENST00000614547 TNKSO95271 1327 aa13.15□□□□□ -0.3
CDH5-208ENST00000614547 FMNL1O95466 1100 aaPredicted RBP13.15□□□□□ -0.3
CDH5-208ENST00000614547 USP14P54578 494 aa13.15□□□□□ -0.3
CDH5-208ENST00000614547 TUBB2AQ13885 445 aa13.15□□□□□ -0.3
CDH5-208ENST00000614547 RRAGAQ7L523 313 aa13.15□□□□□ -0.3
CDH5-208ENST00000614547 DYMQ7RTS9 669 aa13.15□□□□□ -0.3
CDH5-208ENST00000614547 TUBB2BQ9BVA1 445 aa13.15□□□□□ -0.3
CDH5-208ENST00000614547 IFT172Q9UG01 1749 aa13.15□□□□□ -0.3
CDH5-208ENST00000614547 DLC1Q96QB1 1528 aa13.15□□□□□ -0.3
CDH5-208ENST00000614547 KRT18P05783 430 aaKnown RBP13.15□□□□□ -0.3
CDH5-208ENST00000614547 RPSAP08865 295 aaKnown RBP13.15□□□□□ -0.3
CDH5-208ENST00000614547 GBP2P32456 591 aaPredicted RBP13.15□□□□□ -0.3
CDH5-208ENST00000614547 ADD2P35612 726 aa13.15□□□□□ -0.3
CDH5-208ENST00000614547 CCDC40Q4G0X9 1142 aa13.15□□□□□ -0.3
CDH5-208ENST00000614547 MCTP2Q6DN12 878 aa13.15□□□□□ -0.3
CDH5-208ENST00000614547 SALL1Q9NSC2 1324 aa13.15□□□□□ -0.3
CDH5-208ENST00000614547 PP2D1A8MPX8 630 aa13.15□□□□□ -0.31
CDH5-208ENST00000614547 PLEKHA8P1O95397 391 aa13.15□□□□□ -0.31
CDH5-208ENST00000614547 RPN1P04843 607 aaKnown RBP13.15□□□□□ -0.31
CDH5-208ENST00000614547 TUBB4BP68371 445 aa13.15□□□□□ -0.31
CDH5-208ENST00000614547 PPFIA1Q13136 1202 aa13.15□□□□□ -0.31
CDH5-208ENST00000614547 NAA25Q14CX7 972 aa13.15□□□□□ -0.31
CDH5-208ENST00000614547 CEP85LQ5SZL2 805 aa13.15□□□□□ -0.31
CDH5-208ENST00000614547 UBLCP1Q8WVY7 318 aaPredicted RBP13.15□□□□□ -0.31
CDH5-208ENST00000614547 CCDC51Q96ER9 411 aa13.15□□□□□ -0.31
CDH5-208ENST00000614547 RRP36Q96EU6 259 aaKnown RBP13.15□□□□□ -0.31
CDH5-208ENST00000614547 LY9Q9HBG7 655 aa13.15□□□□□ -0.31
CDH5-208ENST00000614547 FAM53CQ9NYF3 392 aa13.15□□□□□ -0.31
CDH5-208ENST00000614547 TMOD3Q9NYL9 352 aa13.15□□□□□ -0.31
CDH5-208ENST00000614547 MYO1FO00160 1098 aa13.14□□□□□ -0.31
CDH5-208ENST00000614547 TOB1P50616 345 aaPredicted RBP13.14□□□□□ -0.31
CDH5-208ENST00000614547 CORO7P57737 925 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms