RNA–Protein interactions for RNA: ENST00000613744.4

POLR2J3-220, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene POLR2J3, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-220ENST00000613744 CCDC129Q6ZRS4 1044 aa24.85■■□□□ 1.57
POLR2J3-220ENST00000613744 ZNF384Q8TF68 577 aa24.85■■□□□ 1.57
POLR2J3-220ENST00000613744 MYCBPQ99417 103 aaPredicted RBP24.85■■□□□ 1.57
POLR2J3-220ENST00000613744 DSCC1Q9BVC3 393 aa24.85■■□□□ 1.57
POLR2J3-220ENST00000613744 FAM107BQ9H098 131 aa24.85■■□□□ 1.57
POLR2J3-220ENST00000613744 MED4Q9NPJ6 270 aa24.85■■□□□ 1.57
POLR2J3-220ENST00000613744 L1RE1Q9UN81 338 aa24.85■■□□□ 1.57
POLR2J3-220ENST00000613744 PFKFB1P16118 471 aa24.85■■□□□ 1.57
POLR2J3-220ENST00000613744 PDIA3P30101 505 aaKnown RBP24.85■■□□□ 1.57
POLR2J3-220ENST00000613744 MAP3K12Q12852 859 aa24.85■■□□□ 1.57
POLR2J3-220ENST00000613744 DIXDC1Q155Q3 683 aa24.85■■□□□ 1.57
POLR2J3-220ENST00000613744 AXDND1Q5T1B0 1012 aaPredicted RBP24.85■■□□□ 1.57
POLR2J3-220ENST00000613744 RSBN1LQ6PCB5 846 aaPredicted RBP24.85■■□□□ 1.57
POLR2J3-220ENST00000613744 STOX1Q6ZVD7 989 aa24.85■■□□□ 1.57
POLR2J3-220ENST00000613744 DZIP1Q86YF9 867 aaKnown RBP24.85■■□□□ 1.57
POLR2J3-220ENST00000613744 CLIC4Q9Y696 253 aa24.85■■□□□ 1.57
POLR2J3-220ENST00000613744 ZNF646O15015 1829 aaPredicted RBP24.85■■□□□ 1.57
POLR2J3-220ENST00000613744 FOSBP53539 338 aa24.84■■□□□ 1.57
POLR2J3-220ENST00000613744 MYSM1Q5VVJ2 828 aa24.84■■□□□ 1.57
POLR2J3-220ENST00000613744 CERS3Q8IU89 383 aa24.84■■□□□ 1.57
POLR2J3-220ENST00000613744 ELOA2Q8IYF1 753 aaPredicted RBP24.84■■□□□ 1.57
POLR2J3-220ENST00000613744 TTF2Q9UNY4 1162 aaKnown RBP24.84■■□□□ 1.57
POLR2J3-220ENST00000613744 EFCAB13Q8IY85 973 aa24.84■■□□□ 1.57
POLR2J3-220ENST00000613744 ANKZF1Q9H8Y5 726 aa24.84■■□□□ 1.57
POLR2J3-220ENST00000613744 CDC23Q9UJX2 597 aa24.84■■□□□ 1.57
POLR2J3-220ENST00000613744 TIAM2Q8IVF5 1701 aa24.83■■□□□ 1.57
POLR2J3-220ENST00000613744 PDE6AP16499 860 aa24.83■■□□□ 1.57
POLR2J3-220ENST00000613744 ATP2B1P20020 1258 aa24.83■■□□□ 1.57
POLR2J3-220ENST00000613744 TNIP1Q15025 636 aa24.83■■□□□ 1.57
POLR2J3-220ENST00000613744 SPTY2D1Q68D10 685 aaPredicted RBP24.83■■□□□ 1.57
POLR2J3-220ENST00000613744 PACS2Q86VP3 889 aa24.83■■□□□ 1.57
POLR2J3-220ENST00000613744 NSUN4Q96CB9 384 aaKnown RBP24.83■■□□□ 1.57
POLR2J3-220ENST00000613744 ZNF532Q9HCE3 1301 aa24.83■■□□□ 1.57
POLR2J3-220ENST00000613744 SHTN1A0MZ66 631 aa24.82■■□□□ 1.56
POLR2J3-220ENST00000613744 ZFYP08048 801 aaPredicted RBP24.82■■□□□ 1.56
POLR2J3-220ENST00000613744 ADD2P35612 726 aa24.82■■□□□ 1.56
POLR2J3-220ENST00000613744 HSP90B2PQ58FF3 399 aa24.82■■□□□ 1.56
POLR2J3-220ENST00000613744 ZMYM1Q5SVZ6 1142 aa24.82■■□□□ 1.56
POLR2J3-220ENST00000613744 ANO1Q5XXA6 986 aa24.82■■□□□ 1.56
POLR2J3-220ENST00000613744 SYNE3Q6ZMZ3 975 aa24.82■■□□□ 1.56
POLR2J3-220ENST00000613744 ADGRA1Q86SQ6 560 aa24.82■■□□□ 1.56
POLR2J3-220ENST00000613744 FAM177A1Q8N128 213 aaPredicted RBP24.82■■□□□ 1.56
POLR2J3-220ENST00000613744 CCDC12Q8WUD4 166 aaPredicted RBP24.82■■□□□ 1.56
POLR2J3-220ENST00000613744 DDNO94850 711 aaPredicted RBP24.82■■□□□ 1.56
POLR2J3-220ENST00000613744 FDPSP14324 419 aaKnown RBP24.82■■□□□ 1.56
POLR2J3-220ENST00000613744 TC2NQ8N9U0 490 aa24.82■■□□□ 1.56
POLR2J3-220ENST00000613744 OSBP2Q969R2 916 aa24.82■■□□□ 1.56
POLR2J3-220ENST00000613744 LRRC2Q9BYS8 371 aa24.82■■□□□ 1.56
POLR2J3-220ENST00000613744 DEF6Q9H4E7 631 aa24.82■■□□□ 1.56
POLR2J3-220ENST00000613744 HPSEQ9Y251 543 aa24.82■■□□□ 1.56
POLR2J3-220ENST00000613744 PSME4Q14997 1843 aa24.82■■□□□ 1.56
POLR2J3-220ENST00000613744 DOCK2Q92608 1830 aa24.82■■□□□ 1.56
POLR2J3-220ENST00000613744 CYP7A1P22680 504 aa24.81■■□□□ 1.56
POLR2J3-220ENST00000613744 MMP14P50281 582 aa24.81■■□□□ 1.56
POLR2J3-220ENST00000613744 CCT2P78371 535 aaKnown RBP24.81■■□□□ 1.56
POLR2J3-220ENST00000613744 GUCY1B3Q02153 619 aa24.81■■□□□ 1.56
POLR2J3-220ENST00000613744 SWT1Q5T5J6 900 aaKnown RBP24.81■■□□□ 1.56
POLR2J3-220ENST00000613744 M0R2C6 588 aa24.81■■□□□ 1.56
POLR2J3-220ENST00000613744 CCDC175P0C221 793 aa24.81■■□□□ 1.56
POLR2J3-220ENST00000613744 SYKP43405 635 aa24.81■■□□□ 1.56
POLR2J3-220ENST00000613744 SPECC1LQ69YQ0 1117 aa24.81■■□□□ 1.56
POLR2J3-220ENST00000613744 C8orf76Q96K31 380 aa24.81■■□□□ 1.56
POLR2J3-220ENST00000613744 NAA15Q9BXJ9 866 aaKnown RBP24.81■■□□□ 1.56
POLR2J3-220ENST00000613744 PUS7LQ9H0K6 701 aaKnown RBP24.81■■□□□ 1.56
POLR2J3-220ENST00000613744 HELLSQ9NRZ9 838 aa24.81■■□□□ 1.56
POLR2J3-220ENST00000613744 PCDHAC2Q9Y5I4 1007 aa24.81■■□□□ 1.56
POLR2J3-220ENST00000613744 MAST3O60307 1309 aa24.8■■□□□ 1.56
POLR2J3-220ENST00000613744 GMPSP49915 693 aaPredicted RBP24.8■■□□□ 1.56
POLR2J3-220ENST00000613744 JMYQ8N9B5 988 aa24.8■■□□□ 1.56
POLR2J3-220ENST00000613744 MIGA1Q8NAN2 632 aa24.8■■□□□ 1.56
POLR2J3-220ENST00000613744 TMEM232C9JQI7 657 aa24.79■■□□□ 1.56
POLR2J3-220ENST00000613744 PPP6R2O75170 966 aa24.79■■□□□ 1.56
POLR2J3-220ENST00000613744 PPFIA4O75335 1185 aa24.79■■□□□ 1.56
POLR2J3-220ENST00000613744 MCM6Q14566 821 aa24.79■■□□□ 1.56
POLR2J3-220ENST00000613744 SLC39A14Q15043 492 aa24.79■■□□□ 1.56
POLR2J3-220ENST00000613744 TOGARAM2Q6ZUX3 1019 aa24.79■■□□□ 1.56
POLR2J3-220ENST00000613744 APPBP2Q92624 585 aa24.79■■□□□ 1.56
POLR2J3-220ENST00000613744 VIPAS39Q9H9C1 493 aa24.79■■□□□ 1.56
POLR2J3-220ENST00000613744 INTS13Q9NVM9 706 aa24.79■■□□□ 1.56
POLR2J3-220ENST00000613744 FAN1Q9Y2M0 1017 aa24.79■■□□□ 1.56
POLR2J3-220ENST00000613744 TCRBV5S4A2TA0A5A2 114 aa24.79■■□□□ 1.56
POLR2J3-220ENST00000613744 PANX2Q96RD6 677 aa24.79■■□□□ 1.56
POLR2J3-220ENST00000613744 GMLQ99445 158 aa24.79■■□□□ 1.56
POLR2J3-220ENST00000613744 MYH7P12883 1935 aa24.79■■□□□ 1.56
POLR2J3-220ENST00000613744 FKBP1AP62942 108 aaKnown RBP24.78■■□□□ 1.56
POLR2J3-220ENST00000613744 RBM5P52756 815 aaKnown RBP eCLIP24.77■■□□□ 1.56
POLR2J3-220ENST00000613744 UBE3CQ15386 1083 aa24.77■■□□□ 1.56
POLR2J3-220ENST00000613744 LRRC31Q6UY01 552 aa24.77■■□□□ 1.56
POLR2J3-220ENST00000613744 NCOA5Q9HCD5 579 aaKnown RBP24.77■■□□□ 1.56
POLR2J3-220ENST00000613744 FANCLQ9NW38 375 aa24.77■■□□□ 1.56
POLR2J3-220ENST00000613744 ADAMTSL1Q8N6G6 1762 aa24.77■■□□□ 1.56
POLR2J3-220ENST00000613744 CTCFLQ8NI51 663 aaPredicted RBP24.77■■□□□ 1.56
POLR2J3-220ENST00000613744 A0A087WUV0 522 aaPredicted RBP24.76■■□□□ 1.55
POLR2J3-220ENST00000613744 KIF5CO60282 957 aa24.76■■□□□ 1.55
POLR2J3-220ENST00000613744 GPC2Q8N158 579 aa24.76■■□□□ 1.55
POLR2J3-220ENST00000613744 AGBL3Q8NEM8 1001 aa24.76■■□□□ 1.55
POLR2J3-220ENST00000613744 ZFP91Q96JP5 570 aaPredicted RBP24.76■■□□□ 1.55
POLR2J3-220ENST00000613744 ABCB6Q9NP58 842 aa24.76■■□□□ 1.55
POLR2J3-220ENST00000613744 DACH1Q9UI36 760 aa24.76■■□□□ 1.55
POLR2J3-220ENST00000613744 MYO3BQ8WXR4 1341 aa24.76■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms