RNA–Protein interactions for RNA: ENST00000613455.4

CPNE9-205, Transcript of copine family member 9, humanhuman

TSL 5 BASIC

Gene CPNE9, Length 1,742 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9-205ENST00000613455 PHIPQ8WWQ0 1821 aa23.47■■□□□ 1.35
CPNE9-205ENST00000613455 VEGFAP15692 232 aaPredicted RBP23.47■■□□□ 1.35
CPNE9-205ENST00000613455 AKAP17AQ02040 695 aaKnown RBP23.47■■□□□ 1.35
CPNE9-205ENST00000613455 GUCY1B3Q02153 619 aa23.47■■□□□ 1.35
CPNE9-205ENST00000613455 RGS22Q8NE09 1264 aa23.47■■□□□ 1.35
CPNE9-205ENST00000613455 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.47■■□□□ 1.35
CPNE9-205ENST00000613455 ZKSCAN4Q969J2 545 aaPredicted RBP23.47■■□□□ 1.35
CPNE9-205ENST00000613455 RRAGCQ9HB90 399 aa23.47■■□□□ 1.35
CPNE9-205ENST00000613455 USP2O75604 605 aaPredicted RBP23.46■■□□□ 1.35
CPNE9-205ENST00000613455 CCDC96Q2M329 555 aa23.46■■□□□ 1.35
CPNE9-205ENST00000613455 KIAA1755Q5JYT7 1200 aa23.46■■□□□ 1.35
CPNE9-205ENST00000613455 GPATCH4Q5T3I0 446 aaKnown RBP23.46■■□□□ 1.35
CPNE9-205ENST00000613455 CLEC17AQ6ZS10 378 aa23.46■■□□□ 1.35
CPNE9-205ENST00000613455 GMCL1Q96IK5 515 aa23.46■■□□□ 1.35
CPNE9-205ENST00000613455 GPCPD1Q9NPB8 672 aa23.46■■□□□ 1.35
CPNE9-205ENST00000613455 RAD21O60216 631 aa23.45■■□□□ 1.34
CPNE9-205ENST00000613455 SMARCA1P28370 1054 aa23.45■■□□□ 1.34
CPNE9-205ENST00000613455 SLC1A4P43007 532 aa23.45■■□□□ 1.34
CPNE9-205ENST00000613455 PRKG1Q13976 671 aa23.45■■□□□ 1.34
CPNE9-205ENST00000613455 NOL9Q5SY16 702 aaKnown RBP23.45■■□□□ 1.34
CPNE9-205ENST00000613455 KCTD1Q719H9 257 aa23.45■■□□□ 1.34
CPNE9-205ENST00000613455 FERMT3Q86UX7 667 aa23.45■■□□□ 1.34
CPNE9-205ENST00000613455 SHISA4Q96DD7 197 aa23.45■■□□□ 1.34
CPNE9-205ENST00000613455 TTBK2Q6IQ55 1244 aa23.45■■□□□ 1.34
CPNE9-205ENST00000613455 CHAMP1Q96JM3 812 aa23.45■■□□□ 1.34
CPNE9-205ENST00000613455 UBA5Q9GZZ9 404 aa23.45■■□□□ 1.34
CPNE9-205ENST00000613455 RIOX1Q9H6W3 641 aa23.45■■□□□ 1.34
CPNE9-205ENST00000613455 RBM27Q9P2N5 1060 aaKnown RBP23.45■■□□□ 1.34
CPNE9-205ENST00000613455 RESTQ13127 1097 aa23.44■■□□□ 1.34
CPNE9-205ENST00000613455 PFKFB3Q16875 520 aaPredicted RBP23.44■■□□□ 1.34
CPNE9-205ENST00000613455 KRT40Q6A162 431 aa23.44■■□□□ 1.34
CPNE9-205ENST00000613455 PIBF1Q8WXW3 757 aa23.44■■□□□ 1.34
CPNE9-205ENST00000613455 NUP88Q99567 741 aaPredicted RBP23.44■■□□□ 1.34
CPNE9-205ENST00000613455 SH2D4AQ9H788 454 aa23.44■■□□□ 1.34
CPNE9-205ENST00000613455 GOPCQ9HD26 462 aa23.44■■□□□ 1.34
CPNE9-205ENST00000613455 BAG4O95429 457 aaKnown RBP23.43■■□□□ 1.34
CPNE9-205ENST00000613455 SCG2P13521 617 aa23.43■■□□□ 1.34
CPNE9-205ENST00000613455 PTPRAP18433 802 aa23.43■■□□□ 1.34
CPNE9-205ENST00000613455 SPICE1Q8N0Z3 855 aa23.43■■□□□ 1.34
CPNE9-205ENST00000613455 VCPKMTQ9H867 229 aa23.43■■□□□ 1.34
CPNE9-205ENST00000613455 CLEC11AQ9Y240 323 aa23.43■■□□□ 1.34
CPNE9-205ENST00000613455 MYH15Q9Y2K3 1946 aa23.43■■□□□ 1.34
CPNE9-205ENST00000613455 MAP1SQ66K74 1059 aaPredicted RBP23.42■■□□□ 1.34
CPNE9-205ENST00000613455 NMRK2Q9NPI5 230 aa23.42■■□□□ 1.34
CPNE9-205ENST00000613455 PICK1Q9NRD5 415 aa23.42■■□□□ 1.34
CPNE9-205ENST00000613455 PPP1R12BO60237 982 aaPredicted RBP23.42■■□□□ 1.34
CPNE9-205ENST00000613455 ZYXQ15942 572 aaKnown RBP23.42■■□□□ 1.34
CPNE9-205ENST00000613455 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.42■■□□□ 1.34
CPNE9-205ENST00000613455 VPS54Q9P1Q0 977 aa23.42■■□□□ 1.34
CPNE9-205ENST00000613455 TCHHQ07283 1943 aa23.42■■□□□ 1.34
CPNE9-205ENST00000613455 NF2P35240 595 aa23.41■■□□□ 1.34
CPNE9-205ENST00000613455 SLC16A2P36021 539 aa23.41■■□□□ 1.34
CPNE9-205ENST00000613455 NFKBIBQ15653 356 aa23.41■■□□□ 1.34
CPNE9-205ENST00000613455 GBP4Q96PP9 640 aa23.41■■□□□ 1.34
CPNE9-205ENST00000613455 FEZ1Q99689 392 aa23.41■■□□□ 1.34
CPNE9-205ENST00000613455 WDR18Q9BV38 432 aa23.41■■□□□ 1.34
CPNE9-205ENST00000613455 KIAA1683Q9H0B3 1180 aa23.41■■□□□ 1.34
CPNE9-205ENST00000613455 BMP3P12645 472 aa23.4■■□□□ 1.34
CPNE9-205ENST00000613455 MAP3K9P80192 1104 aa23.4■■□□□ 1.34
CPNE9-205ENST00000613455 TRIM29Q14134 588 aa23.4■■□□□ 1.34
CPNE9-205ENST00000613455 VGLL4Q14135 290 aa23.4■■□□□ 1.34
CPNE9-205ENST00000613455 FOXD4L6Q3SYB3 417 aaPredicted RBP23.4■■□□□ 1.34
CPNE9-205ENST00000613455 MCTP1Q6DN14 999 aa23.4■■□□□ 1.34
CPNE9-205ENST00000613455 FOXD4L3Q6VB84 417 aaPredicted RBP23.4■■□□□ 1.34
CPNE9-205ENST00000613455 LDHDQ86WU2 507 aa23.4■■□□□ 1.34
CPNE9-205ENST00000613455 ADGRF4Q8IZF3 695 aa23.4■■□□□ 1.34
CPNE9-205ENST00000613455 KCNJ14Q9UNX9 436 aa23.4■■□□□ 1.34
CPNE9-205ENST00000613455 SNCAIPQ9Y6H5 919 aa23.4■■□□□ 1.34
CPNE9-205ENST00000613455 KIF23Q02241 960 aaPredicted RBP23.39■■□□□ 1.34
CPNE9-205ENST00000613455 ZNF526Q8TF50 670 aaPredicted RBP23.39■■□□□ 1.34
CPNE9-205ENST00000613455 MTMR8Q96EF0 704 aa23.39■■□□□ 1.34
CPNE9-205ENST00000613455 RRP36Q96EU6 259 aaKnown RBP23.39■■□□□ 1.34
CPNE9-205ENST00000613455 PIGSQ96S52 555 aa23.39■■□□□ 1.34
CPNE9-205ENST00000613455 ZSCAN16Q9H4T2 348 aaPredicted RBP23.39■■□□□ 1.34
CPNE9-205ENST00000613455 JMJD4Q9H9V9 463 aa23.39■■□□□ 1.34
CPNE9-205ENST00000613455 VAT1LQ9HCJ6 419 aa23.39■■□□□ 1.34
CPNE9-205ENST00000613455 ISY1Q9ULR0 285 aaKnown RBP23.39■■□□□ 1.34
CPNE9-205ENST00000613455 KIF28PB7ZC32 967 aa23.39■■□□□ 1.33
CPNE9-205ENST00000613455 MMP1P03956 469 aa23.39■■□□□ 1.33
CPNE9-205ENST00000613455 HOMER1Q86YM7 354 aa23.39■■□□□ 1.33
CPNE9-205ENST00000613455 GPKOWQ92917 476 aaPredicted RBP eCLIP23.39■■□□□ 1.33
CPNE9-205ENST00000613455 ATP6V1DQ9Y5K8 247 aa23.39■■□□□ 1.33
CPNE9-205ENST00000613455 TRAF5O00463 557 aa23.38■■□□□ 1.33
CPNE9-205ENST00000613455 IREB2P48200 963 aaKnown RBP23.38■■□□□ 1.33
CPNE9-205ENST00000613455 MTMR2Q13614 643 aa23.38■■□□□ 1.33
CPNE9-205ENST00000613455 MAP3K11Q16584 847 aa23.38■■□□□ 1.33
CPNE9-205ENST00000613455 FAM83BQ5T0W9 1011 aa23.38■■□□□ 1.33
CPNE9-205ENST00000613455 WWC2Q6AWC2 1192 aa23.38■■□□□ 1.33
CPNE9-205ENST00000613455 FAM173BQ6P4H8 233 aa23.38■■□□□ 1.33
CPNE9-205ENST00000613455 BTNL9Q6UXG8 535 aa23.38■■□□□ 1.33
CPNE9-205ENST00000613455 PHF20Q9BVI0 1012 aa23.38■■□□□ 1.33
CPNE9-205ENST00000613455 USP17L10C9JJH3 530 aa23.37■■□□□ 1.33
CPNE9-205ENST00000613455 TMEM232C9JQI7 657 aa23.37■■□□□ 1.33
CPNE9-205ENST00000613455 XBP1P17861 261 aa23.37■■□□□ 1.33
CPNE9-205ENST00000613455 SPP2Q13103 211 aa23.37■■□□□ 1.33
CPNE9-205ENST00000613455 TYW1BQ6NUM6 668 aa23.37■■□□□ 1.33
CPNE9-205ENST00000613455 MOB2Q70IA6 237 aa23.37■■□□□ 1.33
CPNE9-205ENST00000613455 ZNF280CQ8ND82 737 aa23.37■■□□□ 1.33
CPNE9-205ENST00000613455 AS3MTQ9HBK9 375 aa23.37■■□□□ 1.33
CPNE9-205ENST00000613455 SEC63Q9UGP8 760 aaKnown RBP23.37■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms