RNA–Protein interactions for RNA: ENST00000613296.4

ALMS1-206, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ALMS1, Length 12,925 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-206ENST00000613296 PPP1R2P41236 205 aa9.17□□□□□ -0.94
ALMS1-206ENST00000613296 ZKSCAN8Q15776 578 aaPredicted RBP9.17□□□□□ -0.94
ALMS1-206ENST00000613296 CSGALNACT2Q8N6G5 542 aa9.17□□□□□ -0.94
ALMS1-206ENST00000613296 KIF9Q9HAQ2 790 aa9.17□□□□□ -0.94
ALMS1-206ENST00000613296 PDS5BQ9NTI5 1447 aa9.17□□□□□ -0.94
ALMS1-206ENST00000613296 SSH1Q8WYL5 1049 aa9.17□□□□□ -0.94
ALMS1-206ENST00000613296 UPF3AQ9H1J1 476 aaKnown RBP9.17□□□□□ -0.94
ALMS1-206ENST00000613296 AMFRQ9UKV5 643 aa9.17□□□□□ -0.94
ALMS1-206ENST00000613296 CCDC141Q6ZP82 1450 aa9.17□□□□□ -0.94
ALMS1-206ENST00000613296 PRPF6O94906 941 aaKnown RBP9.17□□□□□ -0.94
ALMS1-206ENST00000613296 PDE1BQ01064 536 aa9.17□□□□□ -0.94
ALMS1-206ENST00000613296 STX19Q8N4C7 294 aa9.17□□□□□ -0.94
ALMS1-206ENST00000613296 TSC1Q92574 1164 aa9.17□□□□□ -0.94
ALMS1-206ENST00000613296 PASKQ96RG2 1323 aa9.17□□□□□ -0.94
ALMS1-206ENST00000613296 ARHGEF35A5YM69 484 aa9.17□□□□□ -0.94
ALMS1-206ENST00000613296 GRAMD1BQ3KR37 738 aa9.17□□□□□ -0.94
ALMS1-206ENST00000613296 ZBTB3Q9H5J0 574 aa9.17□□□□□ -0.94
ALMS1-206ENST00000613296 PTPRCP08575 1304 aa9.17□□□□□ -0.94
ALMS1-206ENST00000613296 FAM135AQ9P2D6 1515 aa9.17□□□□□ -0.94
ALMS1-206ENST00000613296 PPP1R42Q7Z4L9 355 aa9.17□□□□□ -0.94
ALMS1-206ENST00000613296 KLHL29Q96CT2 875 aa9.17□□□□□ -0.94
ALMS1-206ENST00000613296 SERPINI1Q99574 410 aa9.17□□□□□ -0.94
ALMS1-206ENST00000613296 MAP3K2Q9Y2U5 619 aa9.17□□□□□ -0.94
ALMS1-206ENST00000613296 TJAP1Q5JTD0 557 aa9.17□□□□□ -0.94
ALMS1-206ENST00000613296 RINT1Q6NUQ1 792 aa9.17□□□□□ -0.94
ALMS1-206ENST00000613296 SLFN14P0C7P3 912 aa9.16□□□□□ -0.94
ALMS1-206ENST00000613296 RAPH1Q70E73 1250 aa9.16□□□□□ -0.94
ALMS1-206ENST00000613296 MAML1Q92585 1016 aa9.16□□□□□ -0.94
ALMS1-206ENST00000613296 VPS16Q9H269 839 aa9.16□□□□□ -0.94
ALMS1-206ENST00000613296 TRPC5Q9UL62 973 aaPredicted RBP9.16□□□□□ -0.94
ALMS1-206ENST00000613296 PRG3Q9Y2Y8 225 aaPredicted RBP9.16□□□□□ -0.94
ALMS1-206ENST00000613296 TAGAPQ8N103 731 aa9.16□□□□□ -0.94
ALMS1-206ENST00000613296 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.16□□□□□ -0.94
ALMS1-206ENST00000613296 TCP11Q8WWU5 503 aa9.16□□□□□ -0.94
ALMS1-206ENST00000613296 MYO1AQ9UBC5 1043 aa9.16□□□□□ -0.94
ALMS1-206ENST00000613296 SLC4A7Q9Y6M7 1214 aa9.16□□□□□ -0.94
ALMS1-206ENST00000613296 ABHD8Q96I13 439 aa9.16□□□□□ -0.94
ALMS1-206ENST00000613296 UQCRFS1P1P0C7P4 283 aa9.16□□□□□ -0.94
ALMS1-206ENST00000613296 KLHL30Q0D2K2 578 aa9.16□□□□□ -0.94
ALMS1-206ENST00000613296 UBN1Q9NPG3 1134 aa9.16□□□□□ -0.94
ALMS1-206ENST00000613296 CCPG1Q9ULG6 757 aa9.16□□□□□ -0.94
ALMS1-206ENST00000613296 CAPN9O14815 690 aa9.16□□□□□ -0.94
ALMS1-206ENST00000613296 HIF1AQ16665 826 aa9.16□□□□□ -0.94
ALMS1-206ENST00000613296 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.16□□□□□ -0.94
ALMS1-206ENST00000613296 MED10Q9BTT4 135 aa9.16□□□□□ -0.94
ALMS1-206ENST00000613296 MRPL44Q9H9J2 332 aaKnown RBP9.16□□□□□ -0.94
ALMS1-206ENST00000613296 PIK3R4Q99570 1358 aa9.16□□□□□ -0.94
ALMS1-206ENST00000613296 ORC4O43929 436 aa9.16□□□□□ -0.94
ALMS1-206ENST00000613296 DEPDC1Q5TB30 811 aa9.16□□□□□ -0.94
ALMS1-206ENST00000613296 TRPC6Q9Y210 931 aa9.16□□□□□ -0.94
ALMS1-206ENST00000613296 SORBS3O60504 671 aa9.16□□□□□ -0.94
ALMS1-206ENST00000613296 SLC9A1P19634 815 aa9.16□□□□□ -0.94
ALMS1-206ENST00000613296 ADCK1Q86TW2 530 aa9.16□□□□□ -0.94
ALMS1-206ENST00000613296 TMTC1Q8IUR5 882 aa9.16□□□□□ -0.94
ALMS1-206ENST00000613296 ZNF692Q9BU19 519 aaPredicted RBP9.16□□□□□ -0.94
ALMS1-206ENST00000613296 FGD6Q6ZV73 1430 aa9.16□□□□□ -0.94
ALMS1-206ENST00000613296 IFT88Q13099 833 aa9.16□□□□□ -0.94
ALMS1-206ENST00000613296 DAB1O75553 588 aa9.16□□□□□ -0.94
ALMS1-206ENST00000613296 LRPPRCP42704 1394 aaKnown RBP9.16□□□□□ -0.94
ALMS1-206ENST00000613296 SERPINB10P48595 397 aa9.16□□□□□ -0.94
ALMS1-206ENST00000613296 TYW1BQ6NUM6 668 aa9.16□□□□□ -0.94
ALMS1-206ENST00000613296 DBF4Q9UBU7 674 aaPredicted RBP9.16□□□□□ -0.94
ALMS1-206ENST00000613296 SAR1BQ9Y6B6 198 aa9.16□□□□□ -0.94
ALMS1-206ENST00000613296 MYO10Q9HD67 2058 aa9.16□□□□□ -0.94
ALMS1-206ENST00000613296 E2F5Q15329 346 aa9.16□□□□□ -0.94
ALMS1-206ENST00000613296 LDHAL6AQ6ZMR3 332 aa9.16□□□□□ -0.94
ALMS1-206ENST00000613296 TRIML2Q8N7C3 387 aa9.16□□□□□ -0.94
ALMS1-206ENST00000613296 TBC1D32Q96NH3 1257 aa9.16□□□□□ -0.94
ALMS1-206ENST00000613296 ATP6V0A4Q9HBG4 840 aa9.16□□□□□ -0.94
ALMS1-206ENST00000613296 HYOU1Q9Y4L1 999 aa9.16□□□□□ -0.94
ALMS1-206ENST00000613296 NAIPQ13075 1403 aa9.15□□□□□ -0.94
ALMS1-206ENST00000613296 EXOC3O60645 756 aa9.15□□□□□ -0.94
ALMS1-206ENST00000613296 TRIM42Q8IWZ5 723 aa9.15□□□□□ -0.94
ALMS1-206ENST00000613296 NAF1Q96HR8 494 aaKnown RBP9.15□□□□□ -0.94
ALMS1-206ENST00000613296 ANKRD50Q9ULJ7 1429 aa9.15□□□□□ -0.94
ALMS1-206ENST00000613296 INHBAP08476 426 aa9.15□□□□□ -0.94
ALMS1-206ENST00000613296 SMC5Q8IY18 1101 aa9.15□□□□□ -0.94
ALMS1-206ENST00000613296 FGFR1OP2Q9NVK5 253 aa9.15□□□□□ -0.94
ALMS1-206ENST00000613296 SUGT1Q9Y2Z0 365 aa9.15□□□□□ -0.94
ALMS1-206ENST00000613296 MYRIPQ8NFW9 859 aa9.15□□□□□ -0.94
ALMS1-206ENST00000613296 NUP58Q9BVL2 599 aa9.15□□□□□ -0.94
ALMS1-206ENST00000613296 TBC1D7Q9P0N9 293 aa9.15□□□□□ -0.94
ALMS1-206ENST00000613296 GNAT2P19087 354 aa9.15□□□□□ -0.94
ALMS1-206ENST00000613296 ART3Q13508 389 aa9.15□□□□□ -0.94
ALMS1-206ENST00000613296 ZNF263O14978 683 aa9.15□□□□□ -0.94
ALMS1-206ENST00000613296 E2F6O75461 281 aa9.15□□□□□ -0.94
ALMS1-206ENST00000613296 SERPINB2P05120 415 aa9.15□□□□□ -0.94
ALMS1-206ENST00000613296 HDAC4P56524 1084 aa9.15□□□□□ -0.94
ALMS1-206ENST00000613296 STMN3Q9NZ72 180 aa9.15□□□□□ -0.94
ALMS1-206ENST00000613296 SPOPLQ6IQ16 392 aa9.15□□□□□ -0.94
ALMS1-206ENST00000613296 FIS1Q9Y3D6 152 aa9.15□□□□□ -0.94
ALMS1-206ENST00000613296 NACADO15069 1562 aa9.15□□□□□ -0.94
ALMS1-206ENST00000613296 hCG_2014768A0A024R1R8 64 aa9.15□□□□□ -0.95
ALMS1-206ENST00000613296 YWHAHQ04917 246 aaPredicted RBP9.15□□□□□ -0.95
ALMS1-206ENST00000613296 PDE4DQ08499 809 aa9.15□□□□□ -0.95
ALMS1-206ENST00000613296 ENOX1Q8TC92 643 aaKnown RBP9.15□□□□□ -0.95
ALMS1-206ENST00000613296 STRIP2Q9ULQ0 834 aa9.15□□□□□ -0.95
ALMS1-206ENST00000613296 GCNT3O95395 438 aa9.15□□□□□ -0.95
ALMS1-206ENST00000613296 MAP3K10Q02779 954 aa9.15□□□□□ -0.95
ALMS1-206ENST00000613296 DCDC2Q9UHG0 476 aa9.15□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms