RNA–Protein interactions for RNA: ENST00000612828.4

CNTNAP3B-211, Transcript of contactin associated protein like 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNTNAP3B, Length 7,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-211ENST00000612828 FRMD3A2A2Y4 597 aa11.89□□□□□ -0.51
CNTNAP3B-211ENST00000612828 I3L4J1 428 aa11.89□□□□□ -0.51
CNTNAP3B-211ENST00000612828 AFMP43652 599 aa11.89□□□□□ -0.51
CNTNAP3B-211ENST00000612828 SH3BGRP55822 239 aaPredicted RBP11.89□□□□□ -0.51
CNTNAP3B-211ENST00000612828 TMC6Q7Z403 805 aa11.89□□□□□ -0.51
CNTNAP3B-211ENST00000612828 ENAHQ8N8S7 591 aaPredicted RBP11.89□□□□□ -0.51
CNTNAP3B-211ENST00000612828 KLHDC4Q8TBB5 520 aa11.89□□□□□ -0.51
CNTNAP3B-211ENST00000612828 CHCHD3Q9NX63 227 aaKnown RBP11.89□□□□□ -0.51
CNTNAP3B-211ENST00000612828 GTF2A1LQ9UNN4 478 aa11.89□□□□□ -0.51
CNTNAP3B-211ENST00000612828 CCDC169A6NNP5 214 aa11.89□□□□□ -0.51
CNTNAP3B-211ENST00000612828 TNNC2P02585 160 aa11.89□□□□□ -0.51
CNTNAP3B-211ENST00000612828 RAPGEF1Q13905 1077 aa11.89□□□□□ -0.51
CNTNAP3B-211ENST00000612828 CATIPQ7Z7H3 387 aa11.89□□□□□ -0.51
CNTNAP3B-211ENST00000612828 URB2Q14146 1524 aaKnown RBP11.89□□□□□ -0.51
CNTNAP3B-211ENST00000612828 ARHGAP10A1A4S6 786 aa11.89□□□□□ -0.51
CNTNAP3B-211ENST00000612828 TSPY2A6NKD2 308 aa11.89□□□□□ -0.51
CNTNAP3B-211ENST00000612828 NR1I2O75469 434 aa11.89□□□□□ -0.51
CNTNAP3B-211ENST00000612828 TSPY3P0CV98 308 aa11.89□□□□□ -0.51
CNTNAP3B-211ENST00000612828 TSPY8P0CW00 308 aa11.89□□□□□ -0.51
CNTNAP3B-211ENST00000612828 TSPY1Q01534 308 aa11.89□□□□□ -0.51
CNTNAP3B-211ENST00000612828 TYRO3Q06418 890 aa11.89□□□□□ -0.51
CNTNAP3B-211ENST00000612828 DOLKQ9UPQ8 538 aa11.89□□□□□ -0.51
CNTNAP3B-211ENST00000612828 ARHGEF9O43307 516 aa11.89□□□□□ -0.51
CNTNAP3B-211ENST00000612828 TBC1D8O95759 1140 aa11.89□□□□□ -0.51
CNTNAP3B-211ENST00000612828 CPA1P15085 419 aa11.89□□□□□ -0.51
CNTNAP3B-211ENST00000612828 MSL3Q8N5Y2 521 aaKnown RBP11.89□□□□□ -0.51
CNTNAP3B-211ENST00000612828 CCDC12Q8WUD4 166 aaPredicted RBP11.89□□□□□ -0.51
CNTNAP3B-211ENST00000612828 SLC38A10Q9HBR0 1119 aa11.89□□□□□ -0.51
CNTNAP3B-211ENST00000612828 UTP6Q9NYH9 597 aaKnown RBP11.89□□□□□ -0.51
CNTNAP3B-211ENST00000612828 SLC12A7Q9Y666 1083 aa11.89□□□□□ -0.51
CNTNAP3B-211ENST00000612828 SPDYE3A6NKU9 549 aa11.89□□□□□ -0.51
CNTNAP3B-211ENST00000612828 C11orf74Q86VG3 221 aa11.89□□□□□ -0.51
CNTNAP3B-211ENST00000612828 CHAMP1Q96JM3 812 aa11.89□□□□□ -0.51
CNTNAP3B-211ENST00000612828 LRRC2Q9BYS8 371 aa11.89□□□□□ -0.51
CNTNAP3B-211ENST00000612828 CAPN10Q9HC96 672 aa11.89□□□□□ -0.51
CNTNAP3B-211ENST00000612828 RIC8AQ9NPQ8 531 aa11.89□□□□□ -0.51
CNTNAP3B-211ENST00000612828 AARS2Q5JTZ9 985 aaKnown RBP11.89□□□□□ -0.51
CNTNAP3B-211ENST00000612828 HEATR3Q7Z4Q2 680 aa11.89□□□□□ -0.51
CNTNAP3B-211ENST00000612828 ANKRD44Q8N8A2 993 aa11.89□□□□□ -0.51
CNTNAP3B-211ENST00000612828 STX8Q9UNK0 236 aa11.89□□□□□ -0.51
CNTNAP3B-211ENST00000612828 UGGT2Q9NYU1 1516 aa11.88□□□□□ -0.51
CNTNAP3B-211ENST00000612828 FOXO3O43524 673 aa11.88□□□□□ -0.51
CNTNAP3B-211ENST00000612828 TRPA1O75762 1119 aa11.88□□□□□ -0.51
CNTNAP3B-211ENST00000612828 TAB3Q8N5C8 712 aaPredicted RBP11.88□□□□□ -0.51
CNTNAP3B-211ENST00000612828 RNASE11Q8TAA1 199 aaKnown RBP11.88□□□□□ -0.51
CNTNAP3B-211ENST00000612828 ZBED2Q9BTP6 218 aa11.88□□□□□ -0.51
CNTNAP3B-211ENST00000612828 RBSNQ9H1K0 784 aa11.88□□□□□ -0.51
CNTNAP3B-211ENST00000612828 DDX39AO00148 427 aaKnown RBP11.88□□□□□ -0.51
CNTNAP3B-211ENST00000612828 PRR29P0C7W0 189 aa11.88□□□□□ -0.51
CNTNAP3B-211ENST00000612828 GRK2P25098 689 aa11.88□□□□□ -0.51
CNTNAP3B-211ENST00000612828 LAMC2Q13753 1193 aa11.88□□□□□ -0.51
CNTNAP3B-211ENST00000612828 PIP4K2CQ8TBX8 421 aa11.88□□□□□ -0.51
CNTNAP3B-211ENST00000612828 RPAP3Q9H6T3 665 aaPredicted RBP11.88□□□□□ -0.51
CNTNAP3B-211ENST00000612828 IVNS1ABPQ9Y6Y0 642 aa11.88□□□□□ -0.51
CNTNAP3B-211ENST00000612828 EIF3CLB5ME19 914 aaKnown RBP11.88□□□□□ -0.51
CNTNAP3B-211ENST00000612828 HEXIM1O94992 359 aaKnown RBP11.88□□□□□ -0.51
CNTNAP3B-211ENST00000612828 KRT14P02533 472 aa11.88□□□□□ -0.51
CNTNAP3B-211ENST00000612828 DYNC1I2Q13409 638 aaKnown RBP11.88□□□□□ -0.51
CNTNAP3B-211ENST00000612828 BRDTQ58F21 947 aaPredicted RBP11.88□□□□□ -0.51
CNTNAP3B-211ENST00000612828 ENOX1Q8TC92 643 aaKnown RBP11.88□□□□□ -0.51
CNTNAP3B-211ENST00000612828 NKIRAS1Q9NYS0 192 aa11.88□□□□□ -0.51
CNTNAP3B-211ENST00000612828 PI4KAP2A4QPH2 592 aa11.88□□□□□ -0.51
CNTNAP3B-211ENST00000612828 SKAP2O75563 359 aaPredicted RBP11.88□□□□□ -0.51
CNTNAP3B-211ENST00000612828 ARIH2O95376 493 aa11.88□□□□□ -0.51
CNTNAP3B-211ENST00000612828 APLFQ8IW19 511 aaPredicted RBP11.88□□□□□ -0.51
CNTNAP3B-211ENST00000612828 PI4KAP1Q8N8J0 262 aa11.88□□□□□ -0.51
CNTNAP3B-211ENST00000612828 SNX19Q92543 992 aa11.88□□□□□ -0.51
CNTNAP3B-211ENST00000612828 CCDC124Q96CT7 223 aaKnown RBP11.88□□□□□ -0.51
CNTNAP3B-211ENST00000612828 DRC3Q9H069 523 aa11.88□□□□□ -0.51
CNTNAP3B-211ENST00000612828 WASLO00401 505 aaPredicted RBP11.88□□□□□ -0.51
CNTNAP3B-211ENST00000612828 TADA3O75528 432 aa11.88□□□□□ -0.51
CNTNAP3B-211ENST00000612828 VCAM1P19320 739 aa11.88□□□□□ -0.51
CNTNAP3B-211ENST00000612828 PLEKHM2Q8IWE5 1019 aa11.88□□□□□ -0.51
CNTNAP3B-211ENST00000612828 MRPS35P82673 323 aaKnown RBP11.88□□□□□ -0.51
CNTNAP3B-211ENST00000612828 REXO4Q9GZR2 422 aaKnown RBP11.88□□□□□ -0.51
CNTNAP3B-211ENST00000612828 NCKAP5LQ9HCH0 1330 aa11.88□□□□□ -0.51
CNTNAP3B-211ENST00000612828 AKR1B10O60218 316 aa11.87□□□□□ -0.51
CNTNAP3B-211ENST00000612828 MIIPQ5JXC2 388 aa11.87□□□□□ -0.51
CNTNAP3B-211ENST00000612828 KAT14Q9H8E8 782 aa11.87□□□□□ -0.51
CNTNAP3B-211ENST00000612828 POLKQ9UBT6 870 aa11.87□□□□□ -0.51
CNTNAP3B-211ENST00000612828 PEX19P40855 299 aa11.87□□□□□ -0.51
CNTNAP3B-211ENST00000612828 CAPN12Q6ZSI9 719 aa11.87□□□□□ -0.51
CNTNAP3B-211ENST00000612828 SCAND2PQ9GZW5 306 aaPredicted RBP11.87□□□□□ -0.51
CNTNAP3B-211ENST00000612828 C17orf53Q8N3J3 647 aaPredicted RBP11.87□□□□□ -0.51
CNTNAP3B-211ENST00000612828 SLC17A8Q8NDX2 589 aa11.87□□□□□ -0.51
CNTNAP3B-211ENST00000612828 ESYT1Q9BSJ8 1104 aa11.87□□□□□ -0.51
CNTNAP3B-211ENST00000612828 AKAP2Q9Y2D5 859 aa11.87□□□□□ -0.51
CNTNAP3B-211ENST00000612828 POLR3AO14802 1390 aaPredicted RBP11.87□□□□□ -0.51
CNTNAP3B-211ENST00000612828 TMEM232C9JQI7 657 aa11.87□□□□□ -0.51
CNTNAP3B-211ENST00000612828 ARL4DP49703 201 aa11.87□□□□□ -0.51
CNTNAP3B-211ENST00000612828 NOLC1Q14978 699 aaKnown RBP eCLIP11.87□□□□□ -0.51
CNTNAP3B-211ENST00000612828 RHPN1Q8TCX5 695 aa11.87□□□□□ -0.51
CNTNAP3B-211ENST00000612828 DDX17Q92841 729 aaKnown RBP11.87□□□□□ -0.51
CNTNAP3B-211ENST00000612828 CTTNBP2NLQ9P2B4 639 aa11.87□□□□□ -0.51
CNTNAP3B-211ENST00000612828 TATP17735 454 aaPredicted RBP11.87□□□□□ -0.51
CNTNAP3B-211ENST00000612828 MARCKSP29966 332 aaPredicted RBP11.87□□□□□ -0.51
CNTNAP3B-211ENST00000612828 ZYXQ15942 572 aaKnown RBP11.87□□□□□ -0.51
CNTNAP3B-211ENST00000612828 GPR162Q16538 588 aa11.87□□□□□ -0.51
CNTNAP3B-211ENST00000612828 GLE1Q53GS7 698 aaKnown RBP11.87□□□□□ -0.51
CNTNAP3B-211ENST00000612828 ZNF365Q70YC5 407 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms