RNA–Protein interactions for RNA: ENST00000611723.1

CLTCL1-207, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2

Gene CLTCL1, Length 838 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-207ENST00000611723 BACE1P56817 501 aa18.61■□□□□ 0.57
CLTCL1-207ENST00000611723 SPP2Q13103 211 aa18.61■□□□□ 0.57
CLTCL1-207ENST00000611723 SLFN13Q68D06 897 aa18.61■□□□□ 0.57
CLTCL1-207ENST00000611723 RAB11FIP4Q86YS3 637 aa18.61■□□□□ 0.57
CLTCL1-207ENST00000611723 CCDC83Q8IWF9 413 aa18.61■□□□□ 0.57
CLTCL1-207ENST00000611723 CLMNQ96JQ2 1002 aa18.61■□□□□ 0.57
CLTCL1-207ENST00000611723 VCPKMTQ9H867 229 aa18.61■□□□□ 0.57
CLTCL1-207ENST00000611723 GOPCQ9HD26 462 aa18.61■□□□□ 0.57
CLTCL1-207ENST00000611723 MAD2L2Q9UI95 211 aa18.61■□□□□ 0.57
CLTCL1-207ENST00000611723 NDUFB10O96000 172 aa18.6■□□□□ 0.57
CLTCL1-207ENST00000611723 PARP1P09874 1014 aaKnown RBP18.6■□□□□ 0.57
CLTCL1-207ENST00000611723 SMARCA1P28370 1054 aa18.6■□□□□ 0.57
CLTCL1-207ENST00000611723 RGS19P49795 217 aa18.6■□□□□ 0.57
CLTCL1-207ENST00000611723 USP14P54578 494 aa18.6■□□□□ 0.57
CLTCL1-207ENST00000611723 NTRK3Q16288 839 aa18.6■□□□□ 0.57
CLTCL1-207ENST00000611723 ASPRV1Q53RT3 343 aa18.6■□□□□ 0.57
CLTCL1-207ENST00000611723 SLC10A4Q96EP9 437 aa18.6■□□□□ 0.57
CLTCL1-207ENST00000611723 LZTS2Q9BRK4 669 aa18.6■□□□□ 0.57
CLTCL1-207ENST00000611723 BEGAINQ9BUH8 593 aa18.6■□□□□ 0.57
CLTCL1-207ENST00000611723 ELP3Q9H9T3 547 aa18.6■□□□□ 0.57
CLTCL1-207ENST00000611723 NCOA5Q9HCD5 579 aaKnown RBP18.6■□□□□ 0.57
CLTCL1-207ENST00000611723 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.6■□□□□ 0.57
CLTCL1-207ENST00000611723 TLL2Q9Y6L7 1015 aa18.6■□□□□ 0.57
CLTCL1-207ENST00000611723 OTOFQ9HC10 1997 aa18.6■□□□□ 0.57
CLTCL1-207ENST00000611723 PHIPQ8WWQ0 1821 aa18.6■□□□□ 0.57
CLTCL1-207ENST00000611723 CXCL11O14625 94 aa18.59■□□□□ 0.57
CLTCL1-207ENST00000611723 CTDNEP1O95476 244 aa18.59■□□□□ 0.57
CLTCL1-207ENST00000611723 IFNAR1P17181 557 aa18.59■□□□□ 0.57
CLTCL1-207ENST00000611723 ZNF543Q08ER8 600 aa18.59■□□□□ 0.57
CLTCL1-207ENST00000611723 PPIL2Q13356 520 aa18.59■□□□□ 0.57
CLTCL1-207ENST00000611723 SH3D19Q5HYK7 790 aa18.59■□□□□ 0.57
CLTCL1-207ENST00000611723 KIAA1755Q5JYT7 1200 aa18.59■□□□□ 0.57
CLTCL1-207ENST00000611723 GPATCH4Q5T3I0 446 aaKnown RBP18.59■□□□□ 0.57
CLTCL1-207ENST00000611723 CPLX2Q6PUV4 134 aaKnown RBP18.59■□□□□ 0.57
CLTCL1-207ENST00000611723 USP17L2Q6R6M4 530 aa18.59■□□□□ 0.57
CLTCL1-207ENST00000611723 TMTC3Q6ZXV5 915 aa18.59■□□□□ 0.57
CLTCL1-207ENST00000611723 CCDC144CPQ8IYA2 1237 aa18.59■□□□□ 0.57
CLTCL1-207ENST00000611723 SMARCC2Q8TAQ2 1214 aa18.59■□□□□ 0.57
CLTCL1-207ENST00000611723 LPAR1Q92633 364 aa18.59■□□□□ 0.57
CLTCL1-207ENST00000611723 C12orf42Q96LP6 360 aa18.59■□□□□ 0.57
CLTCL1-207ENST00000611723 EMILIN3Q9NT22 766 aa18.59■□□□□ 0.57
CLTCL1-207ENST00000611723 CPLX1O14810 134 aa18.58■□□□□ 0.56
CLTCL1-207ENST00000611723 SLC1A4P43007 532 aa18.58■□□□□ 0.56
CLTCL1-207ENST00000611723 SLC4A3P48751 1232 aa18.58■□□□□ 0.56
CLTCL1-207ENST00000611723 FUT2Q10981 343 aa18.58■□□□□ 0.56
CLTCL1-207ENST00000611723 STAG2Q8N3U4 1231 aa18.58■□□□□ 0.56
CLTCL1-207ENST00000611723 NSUN7Q8NE18 718 aaKnown RBP18.58■□□□□ 0.56
CLTCL1-207ENST00000611723 FEZ1Q99689 392 aa18.58■□□□□ 0.56
CLTCL1-207ENST00000611723 MCOLN1Q9GZU1 580 aa18.58■□□□□ 0.56
CLTCL1-207ENST00000611723 DAXXQ9UER7 740 aaPredicted RBP18.58■□□□□ 0.56
CLTCL1-207ENST00000611723 KCNH4Q9UQ05 1017 aa18.58■□□□□ 0.56
CLTCL1-207ENST00000611723 KLRF2D3W0D1 207 aa18.57■□□□□ 0.56
CLTCL1-207ENST00000611723 PLA2G6O60733 806 aa18.57■□□□□ 0.56
CLTCL1-207ENST00000611723 CDKL5O76039 1030 aa18.57■□□□□ 0.56
CLTCL1-207ENST00000611723 BMP3P12645 472 aa18.57■□□□□ 0.56
CLTCL1-207ENST00000611723 MTMR2Q13614 643 aa18.57■□□□□ 0.56
CLTCL1-207ENST00000611723 SRBD1Q8N5C6 995 aaKnown RBP18.57■□□□□ 0.56
CLTCL1-207ENST00000611723 CNKSR2Q8WXI2 1034 aa18.57■□□□□ 0.56
CLTCL1-207ENST00000611723 OPTNQ96CV9 577 aa18.57■□□□□ 0.56
CLTCL1-207ENST00000611723 IRF6O14896 467 aa18.56■□□□□ 0.56
CLTCL1-207ENST00000611723 BTNL9Q6UXG8 535 aa18.56■□□□□ 0.56
CLTCL1-207ENST00000611723 NBPF11Q86T75 865 aa18.56■□□□□ 0.56
CLTCL1-207ENST00000611723 SAPCD2Q86UD0 394 aa18.56■□□□□ 0.56
CLTCL1-207ENST00000611723 MTMR7Q9Y216 660 aa18.56■□□□□ 0.56
CLTCL1-207ENST00000611723 A0A0G2JLL6 359 aaPredicted RBP18.55■□□□□ 0.56
CLTCL1-207ENST00000611723 TRIM75PA6NK02 468 aa18.55■□□□□ 0.56
CLTCL1-207ENST00000611723 WDR46O15213 610 aaKnown RBP18.55■□□□□ 0.56
CLTCL1-207ENST00000611723 PLEKHA8P1O95397 391 aa18.55■□□□□ 0.56
CLTCL1-207ENST00000611723 HSP90AA1P07900 732 aaKnown RBP18.55■□□□□ 0.56
CLTCL1-207ENST00000611723 GJA5P36382 358 aa18.55■□□□□ 0.56
CLTCL1-207ENST00000611723 HUNKP57058 714 aa18.55■□□□□ 0.56
CLTCL1-207ENST00000611723 HMGN5P82970 282 aaKnown RBP18.55■□□□□ 0.56
CLTCL1-207ENST00000611723 RASGRP2Q7LDG7 609 aa18.55■□□□□ 0.56
CLTCL1-207ENST00000611723 PRRT2Q7Z6L0 340 aaPredicted RBP18.55■□□□□ 0.56
CLTCL1-207ENST00000611723 OTUD5Q96G74 571 aa18.55■□□□□ 0.56
CLTCL1-207ENST00000611723 ZIC5Q96T25 663 aa18.55■□□□□ 0.56
CLTCL1-207ENST00000611723 SPZ1Q9BXG8 430 aa18.55■□□□□ 0.56
CLTCL1-207ENST00000611723 RIOX1Q9H6W3 641 aa18.55■□□□□ 0.56
CLTCL1-207ENST00000611723 CWC22Q9HCG8 908 aaKnown RBP18.55■□□□□ 0.56
CLTCL1-207ENST00000611723 FRMPD2Q68DX3 1309 aaPredicted RBP18.54■□□□□ 0.56
CLTCL1-207ENST00000611723 PRPF3O43395 683 aaKnown RBP18.54■□□□□ 0.56
CLTCL1-207ENST00000611723 FMNL1O95466 1100 aaPredicted RBP18.54■□□□□ 0.56
CLTCL1-207ENST00000611723 GOLGA8HP0CJ92 632 aa18.54■□□□□ 0.56
CLTCL1-207ENST00000611723 ZYXQ15942 572 aaKnown RBP18.54■□□□□ 0.56
CLTCL1-207ENST00000611723 CCDC96Q2M329 555 aa18.54■□□□□ 0.56
CLTCL1-207ENST00000611723 SLC35G1Q2M3R5 365 aa18.54■□□□□ 0.56
CLTCL1-207ENST00000611723 KCTD1Q719H9 257 aa18.54■□□□□ 0.56
CLTCL1-207ENST00000611723 SPICE1Q8N0Z3 855 aa18.54■□□□□ 0.56
CLTCL1-207ENST00000611723 WNK4Q96J92 1243 aa18.54■□□□□ 0.56
CLTCL1-207ENST00000611723 HHIPL1Q96JK4 782 aa18.54■□□□□ 0.56
CLTCL1-207ENST00000611723 RNF26Q9BY78 433 aaPredicted RBP18.54■□□□□ 0.56
CLTCL1-207ENST00000611723 GPCPD1Q9NPB8 672 aa18.54■□□□□ 0.56
CLTCL1-207ENST00000611723 TMOD4Q9NZQ9 345 aa18.54■□□□□ 0.56
CLTCL1-207ENST00000611723 FEM1BQ9UK73 627 aa18.54■□□□□ 0.56
CLTCL1-207ENST00000611723 SMC3Q9UQE7 1217 aa18.54■□□□□ 0.56
CLTCL1-207ENST00000611723 STK36Q9NRP7 1315 aa18.53■□□□□ 0.56
CLTCL1-207ENST00000611723 PTPDC1A2A3K4 754 aa18.53■□□□□ 0.56
CLTCL1-207ENST00000611723 CYTH3O43739 400 aa18.53■□□□□ 0.56
CLTCL1-207ENST00000611723 RAD21O60216 631 aa18.53■□□□□ 0.56
CLTCL1-207ENST00000611723 JAK2O60674 1132 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms