RNA–Protein interactions for RNA: ENST00000611598.1

PCDHGB1-202, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGB1, Length 2,592 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-202ENST00000611598 XBP1P17861 261 aa17.06■□□□□ 0.32
PCDHGB1-202ENST00000611598 GNAT2P19087 354 aa17.06■□□□□ 0.32
PCDHGB1-202ENST00000611598 RCAN1P53805 252 aa17.06■□□□□ 0.32
PCDHGB1-202ENST00000611598 PDXDC2PQ6P474 469 aa17.06■□□□□ 0.32
PCDHGB1-202ENST00000611598 RWDD2AQ9UIY3 292 aa17.06■□□□□ 0.32
PCDHGB1-202ENST00000611598 SRGAP2O75044 1071 aa17.06■□□□□ 0.32
PCDHGB1-202ENST00000611598 IL17AQ16552 155 aa17.06■□□□□ 0.32
PCDHGB1-202ENST00000611598 HSP90B2PQ58FF3 399 aa17.06■□□□□ 0.32
PCDHGB1-202ENST00000611598 FAM71BQ8TC56 605 aa17.06■□□□□ 0.32
PCDHGB1-202ENST00000611598 RNF41Q9H4P4 317 aaPredicted RBP17.06■□□□□ 0.32
PCDHGB1-202ENST00000611598 MYO1AQ9UBC5 1043 aa17.06■□□□□ 0.32
PCDHGB1-202ENST00000611598 ZBTB1Q9Y2K1 713 aa17.06■□□□□ 0.32
PCDHGB1-202ENST00000611598 COL5A2P05997 1499 aaPredicted RBP17.06■□□□□ 0.32
PCDHGB1-202ENST00000611598 NDUFA10O95299 355 aa17.05■□□□□ 0.32
PCDHGB1-202ENST00000611598 TUBB4BP68371 445 aa17.05■□□□□ 0.32
PCDHGB1-202ENST00000611598 ATP2C1P98194 919 aaPredicted RBP17.05■□□□□ 0.32
PCDHGB1-202ENST00000611598 UBXN1Q04323 297 aa17.05■□□□□ 0.32
PCDHGB1-202ENST00000611598 GBP3Q9H0R5 595 aa17.05■□□□□ 0.32
PCDHGB1-202ENST00000611598 PLEKHA4Q9H4M7 779 aa17.05■□□□□ 0.32
PCDHGB1-202ENST00000611598 FAM204AQ9H8W3 233 aa17.05■□□□□ 0.32
PCDHGB1-202ENST00000611598 LRP2BPQ9P2M1 347 aa17.05■□□□□ 0.32
PCDHGB1-202ENST00000611598 EPN1Q9Y6I3 576 aaPredicted RBP17.05■□□□□ 0.32
PCDHGB1-202ENST00000611598 BAZ2BQ9UIF8 2168 aaKnown RBP17.05■□□□□ 0.32
PCDHGB1-202ENST00000611598 TTC26A0AVF1 554 aa17.05■□□□□ 0.32
PCDHGB1-202ENST00000611598 TRIM49BA6NDI0 452 aa17.05■□□□□ 0.32
PCDHGB1-202ENST00000611598 WDR93Q6P2C0 686 aa17.05■□□□□ 0.32
PCDHGB1-202ENST00000611598 TRAPPC11Q7Z392 1133 aa17.05■□□□□ 0.32
PCDHGB1-202ENST00000611598 SLC4A9Q96Q91 983 aa17.05■□□□□ 0.32
PCDHGB1-202ENST00000611598 MMS19Q96T76 1030 aa17.05■□□□□ 0.32
PCDHGB1-202ENST00000611598 BCORQ6W2J9 1755 aa17.04■□□□□ 0.32
PCDHGB1-202ENST00000611598 RTL9Q8NET4 1388 aa17.04■□□□□ 0.32
PCDHGB1-202ENST00000611598 SOS2Q07890 1332 aaPredicted RBP17.04■□□□□ 0.32
PCDHGB1-202ENST00000611598 PRPF3O43395 683 aaKnown RBP17.04■□□□□ 0.32
PCDHGB1-202ENST00000611598 ATP1A1P05023 1023 aaKnown RBP17.04■□□□□ 0.32
PCDHGB1-202ENST00000611598 IRF2BP1Q8IU81 584 aa17.04■□□□□ 0.32
PCDHGB1-202ENST00000611598 ESR2Q92731 530 aa17.04■□□□□ 0.32
PCDHGB1-202ENST00000611598 GDAP1L1Q96MZ0 367 aa17.04■□□□□ 0.32
PCDHGB1-202ENST00000611598 MTA3Q9BTC8 594 aa17.04■□□□□ 0.32
PCDHGB1-202ENST00000611598 IVLP07476 585 aa17.04■□□□□ 0.32
PCDHGB1-202ENST00000611598 CYP7A1P22680 504 aa17.04■□□□□ 0.32
PCDHGB1-202ENST00000611598 PRCPP42785 496 aa17.04■□□□□ 0.32
PCDHGB1-202ENST00000611598 LRRC31Q6UY01 552 aa17.04■□□□□ 0.32
PCDHGB1-202ENST00000611598 ANKRD65E5RJM6 399 aa17.03■□□□□ 0.32
PCDHGB1-202ENST00000611598 RNF40O75150 1001 aa17.03■□□□□ 0.32
PCDHGB1-202ENST00000611598 ZMYND10O75800 440 aa17.03■□□□□ 0.32
PCDHGB1-202ENST00000611598 VEGFAP15692 232 aaPredicted RBP17.03■□□□□ 0.32
PCDHGB1-202ENST00000611598 MCM7P33993 719 aa17.03■□□□□ 0.32
PCDHGB1-202ENST00000611598 HERVK_113P62684 666 aa17.03■□□□□ 0.32
PCDHGB1-202ENST00000611598 PIK3AP1Q6ZUJ8 805 aa17.03■□□□□ 0.32
PCDHGB1-202ENST00000611598 CCDC148Q8NFR7 591 aa17.03■□□□□ 0.32
PCDHGB1-202ENST00000611598 CAPZA3Q96KX2 299 aa17.03■□□□□ 0.32
PCDHGB1-202ENST00000611598 ZSCAN10Q96SZ4 725 aaPredicted RBP17.03■□□□□ 0.32
PCDHGB1-202ENST00000611598 LRP5O75197 1615 aa17.03■□□□□ 0.32
PCDHGB1-202ENST00000611598 ARAP2Q8WZ64 1704 aa17.03■□□□□ 0.32
PCDHGB1-202ENST00000611598 GTPBP6O43824 516 aaPredicted RBP17.03■□□□□ 0.32
PCDHGB1-202ENST00000611598 RPS6KA5O75582 802 aa17.03■□□□□ 0.32
PCDHGB1-202ENST00000611598 SYF2O95926 243 aaKnown RBP17.03■□□□□ 0.32
PCDHGB1-202ENST00000611598 BMP15O95972 392 aa17.03■□□□□ 0.32
PCDHGB1-202ENST00000611598 TNNT3P45378 269 aaPredicted RBP17.03■□□□□ 0.32
PCDHGB1-202ENST00000611598 PMS1P54277 932 aaKnown RBP17.03■□□□□ 0.32
PCDHGB1-202ENST00000611598 USP14P54578 494 aa17.03■□□□□ 0.32
PCDHGB1-202ENST00000611598 SPAG1Q07617 926 aa17.03■□□□□ 0.32
PCDHGB1-202ENST00000611598 TRIM14Q14142 442 aa17.03■□□□□ 0.32
PCDHGB1-202ENST00000611598 IFIT1BQ5T764 474 aaKnown RBP17.03■□□□□ 0.32
PCDHGB1-202ENST00000611598 RIN2Q8WYP3 895 aaPredicted RBP17.03■□□□□ 0.32
PCDHGB1-202ENST00000611598 CARD10Q9BWT7 1032 aa17.03■□□□□ 0.32
PCDHGB1-202ENST00000611598 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.03■□□□□ 0.32
PCDHGB1-202ENST00000611598 MYH2Q9UKX2 1941 aa17.02■□□□□ 0.32
PCDHGB1-202ENST00000611598 EVX2Q03828 476 aa17.02■□□□□ 0.32
PCDHGB1-202ENST00000611598 TROAPQ12815 778 aa17.02■□□□□ 0.32
PCDHGB1-202ENST00000611598 ZNF658Q5TYW1 1059 aaPredicted RBP17.02■□□□□ 0.32
PCDHGB1-202ENST00000611598 GSPT2Q8IYD1 628 aaKnown RBP17.02■□□□□ 0.32
PCDHGB1-202ENST00000611598 SLIT2O94813 1529 aa17.02■□□□□ 0.32
PCDHGB1-202ENST00000611598 PSMD14O00487 310 aa17.02■□□□□ 0.31
PCDHGB1-202ENST00000611598 PES1O00541 588 aaKnown RBP17.02■□□□□ 0.31
PCDHGB1-202ENST00000611598 RPN1P04843 607 aaKnown RBP17.02■□□□□ 0.31
PCDHGB1-202ENST00000611598 PARP1P09874 1014 aaKnown RBP17.02■□□□□ 0.31
PCDHGB1-202ENST00000611598 WDR59Q6PJI9 974 aa17.02■□□□□ 0.31
PCDHGB1-202ENST00000611598 CATIPQ7Z7H3 387 aa17.02■□□□□ 0.31
PCDHGB1-202ENST00000611598 ANKRD20A12PQ8NF67 263 aa17.02■□□□□ 0.31
PCDHGB1-202ENST00000611598 BRMS1Q9HCU9 246 aa17.02■□□□□ 0.31
PCDHGB1-202ENST00000611598 MED4Q9NPJ6 270 aa17.02■□□□□ 0.31
PCDHGB1-202ENST00000611598 CYP19A1P11511 503 aaPredicted RBP17.01■□□□□ 0.31
PCDHGB1-202ENST00000611598 ABCF2Q9UG63 623 aa17.01■□□□□ 0.31
PCDHGB1-202ENST00000611598 ZC3H4Q9UPT8 1303 aaKnown RBP17.01■□□□□ 0.31
PCDHGB1-202ENST00000611598 TMTC3Q6ZXV5 915 aa17.01■□□□□ 0.31
PCDHGB1-202ENST00000611598 SRBD1Q8N5C6 995 aaKnown RBP17.01■□□□□ 0.31
PCDHGB1-202ENST00000611598 OR8K1Q8NGG5 319 aa17.01■□□□□ 0.31
PCDHGB1-202ENST00000611598 HPCAL4Q9UM19 191 aa17.01■□□□□ 0.31
PCDHGB1-202ENST00000611598 CNTNAP5Q8WYK1 1306 aa17■□□□□ 0.31
PCDHGB1-202ENST00000611598 RCCD1A6NED2 376 aa17■□□□□ 0.31
PCDHGB1-202ENST00000611598 PRPF6O94906 941 aaKnown RBP17■□□□□ 0.31
PCDHGB1-202ENST00000611598 TUBBP07437 444 aa17■□□□□ 0.31
PCDHGB1-202ENST00000611598 PPP2R5BQ15173 497 aa17■□□□□ 0.31
PCDHGB1-202ENST00000611598 CCDC122Q5T0U0 273 aa17■□□□□ 0.31
PCDHGB1-202ENST00000611598 PPP1R3FQ6ZSY5 799 aaPredicted RBP17■□□□□ 0.31
PCDHGB1-202ENST00000611598 MB21D1Q8N884 522 aa17■□□□□ 0.31
PCDHGB1-202ENST00000611598 EEF2KMTQ96G04 330 aa17■□□□□ 0.31
PCDHGB1-202ENST00000611598 NMT2O60551 498 aa17■□□□□ 0.31
PCDHGB1-202ENST00000611598 MYBL2P10244 700 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms