RNA–Protein interactions for RNA: ENST00000611575.4

CLK4-214, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best) BASIC

Gene CLK4, Length 1,206 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-214ENST00000611575 SYN1P17600 705 aa8.76□□□□□ -1.01
CLK4-214ENST00000611575 HERVK_113P62684 666 aa8.76□□□□□ -1.01
CLK4-214ENST00000611575 PICALMQ13492 652 aa8.76□□□□□ -1.01
CLK4-214ENST00000611575 LRRC26Q2I0M4 334 aa8.76□□□□□ -1.01
CLK4-214ENST00000611575 Q3C1V9 767 aa8.76□□□□□ -1.01
CLK4-214ENST00000611575 ZSCAN29Q8IWY8 852 aaPredicted RBP8.76□□□□□ -1.01
CLK4-214ENST00000611575 TRMT44Q8IYL2 757 aaKnown RBP8.76□□□□□ -1.01
CLK4-214ENST00000611575 LRRN4Q8WUT4 740 aa8.76□□□□□ -1.01
CLK4-214ENST00000611575 XAGE2Q96GT9 111 aa8.76□□□□□ -1.01
CLK4-214ENST00000611575 C12orf42Q96LP6 360 aa8.76□□□□□ -1.01
CLK4-214ENST00000611575 P2RX7Q99572 595 aaKnown RBP8.76□□□□□ -1.01
CLK4-214ENST00000611575 PRM3Q9NNZ6 103 aa8.76□□□□□ -1.01
CLK4-214ENST00000611575 GINM1Q9NU53 330 aa8.76□□□□□ -1.01
CLK4-214ENST00000611575 NDUFB9Q9Y6M9 179 aa8.76□□□□□ -1.01
CLK4-214ENST00000611575 C19orf81C9J6K1 198 aa8.75□□□□□ -1.01
CLK4-214ENST00000611575 PEX10O60683 326 aa8.75□□□□□ -1.01
CLK4-214ENST00000611575 CNMDO75829 334 aa8.75□□□□□ -1.01
CLK4-214ENST00000611575 HOXC6P09630 235 aa8.75□□□□□ -1.01
CLK4-214ENST00000611575 MAPK4P31152 587 aa8.75□□□□□ -1.01
CLK4-214ENST00000611575 ABL2P42684 1182 aa8.75□□□□□ -1.01
CLK4-214ENST00000611575 MVPQ14764 893 aaKnown RBP8.75□□□□□ -1.01
CLK4-214ENST00000611575 DESI1Q6ICB0 168 aa8.75□□□□□ -1.01
CLK4-214ENST00000611575 PI16Q6UXB8 463 aa8.75□□□□□ -1.01
CLK4-214ENST00000611575 LBX2Q6XYB7 198 aa8.75□□□□□ -1.01
CLK4-214ENST00000611575 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.75□□□□□ -1.01
CLK4-214ENST00000611575 SPATA5Q8NB90 893 aa8.75□□□□□ -1.01
CLK4-214ENST00000611575 GPRC5AQ8NFJ5 357 aa8.75□□□□□ -1.01
CLK4-214ENST00000611575 ZNF516Q92618 1163 aa8.75□□□□□ -1.01
CLK4-214ENST00000611575 MTRQ99707 1265 aa8.75□□□□□ -1.01
CLK4-214ENST00000611575 ARID3AQ99856 593 aa8.75□□□□□ -1.01
CLK4-214ENST00000611575 NUDT12Q9BQG2 462 aa8.75□□□□□ -1.01
CLK4-214ENST00000611575 UBE2OQ9C0C9 1292 aaKnown RBP8.75□□□□□ -1.01
CLK4-214ENST00000611575 PORCNQ9H237 461 aa8.75□□□□□ -1.01
CLK4-214ENST00000611575 PI4KBQ9UBF8 816 aa8.75□□□□□ -1.01
CLK4-214ENST00000611575 ABCF2Q9UG63 623 aa8.75□□□□□ -1.01
CLK4-214ENST00000611575 MYH2Q9UKX2 1941 aa8.75□□□□□ -1.01
CLK4-214ENST00000611575 MAST2Q6P0Q8 1798 aa8.75□□□□□ -1.01
CLK4-214ENST00000611575 ASNSP08243 561 aa8.74□□□□□ -1.01
CLK4-214ENST00000611575 CT47B1P0C2W7 299 aaPredicted RBP8.74□□□□□ -1.01
CLK4-214ENST00000611575 CYP2B6P20813 491 aa8.74□□□□□ -1.01
CLK4-214ENST00000611575 CCND3P30281 292 aaPredicted RBP8.74□□□□□ -1.01
CLK4-214ENST00000611575 MCAMP43121 646 aa8.74□□□□□ -1.01
CLK4-214ENST00000611575 ERVK-9P63128 1117 aa8.74□□□□□ -1.01
CLK4-214ENST00000611575 ERVK-24P63145 666 aa8.74□□□□□ -1.01
CLK4-214ENST00000611575 TFCP2Q12800 502 aa8.74□□□□□ -1.01
CLK4-214ENST00000611575 SNX17Q15036 470 aa8.74□□□□□ -1.01
CLK4-214ENST00000611575 CCL14Q16627 93 aa8.74□□□□□ -1.01
CLK4-214ENST00000611575 SHROOM1Q2M3G4 852 aaPredicted RBP8.74□□□□□ -1.01
CLK4-214ENST00000611575 BRICD5Q6PL45 260 aa8.74□□□□□ -1.01
CLK4-214ENST00000611575 BLOC1S3Q6QNY0 202 aa8.74□□□□□ -1.01
CLK4-214ENST00000611575 RNF19BQ6ZMZ0 732 aa8.74□□□□□ -1.01
CLK4-214ENST00000611575 GPR142Q7Z601 462 aa8.74□□□□□ -1.01
CLK4-214ENST00000611575 GTF3C2Q8WUA4 911 aaPredicted RBP8.74□□□□□ -1.01
CLK4-214ENST00000611575 THAP11Q96EK4 314 aa8.74□□□□□ -1.01
CLK4-214ENST00000611575 MEIS3Q99687 375 aa8.74□□□□□ -1.01
CLK4-214ENST00000611575 APBA2Q99767 749 aa8.74□□□□□ -1.01
CLK4-214ENST00000611575 DHX36Q9H2U1 1008 aaKnown RBP8.74□□□□□ -1.01
CLK4-214ENST00000611575 AS3MTQ9HBK9 375 aa8.74□□□□□ -1.01
CLK4-214ENST00000611575 AKAP2Q9Y2D5 859 aa8.74□□□□□ -1.01
CLK4-214ENST00000611575 DOCK3Q8IZD9 2030 aa8.74□□□□□ -1.01
CLK4-214ENST00000611575 XIRP2A4UGR9 3374 aa8.74□□□□□ -1.01
CLK4-214ENST00000611575 USP17L10C9JJH3 530 aa8.73□□□□□ -1.01
CLK4-214ENST00000611575 LDHCP07864 332 aa8.73□□□□□ -1.01
CLK4-214ENST00000611575 ZKSCAN1P17029 563 aaPredicted RBP8.73□□□□□ -1.01
CLK4-214ENST00000611575 RGS2P41220 211 aa8.73□□□□□ -1.01
CLK4-214ENST00000611575 GSTO1P78417 241 aa8.73□□□□□ -1.01
CLK4-214ENST00000611575 TATDN1Q6P1N9 297 aa8.73□□□□□ -1.01
CLK4-214ENST00000611575 TBC1D9Q6ZT07 1266 aa8.73□□□□□ -1.01
CLK4-214ENST00000611575 ADGRA1Q86SQ6 560 aa8.73□□□□□ -1.01
CLK4-214ENST00000611575 FOXP4Q8IVH2 680 aaPredicted RBP8.73□□□□□ -1.01
CLK4-214ENST00000611575 SH3RF3Q8TEJ3 882 aaPredicted RBP8.73□□□□□ -1.01
CLK4-214ENST00000611575 TSC1Q92574 1164 aa8.73□□□□□ -1.01
CLK4-214ENST00000611575 FLRT1Q9NZU1 646 aa8.73□□□□□ -1.01
CLK4-214ENST00000611575 HDAC5Q9UQL6 1122 aa8.73□□□□□ -1.01
CLK4-214ENST00000611575 FLT1P17948 1338 aa8.73□□□□□ -1.01
CLK4-214ENST00000611575 CHD9Q3L8U1 2897 aa8.72□□□□□ -1.01
CLK4-214ENST00000611575 IRX3P78415 501 aaPredicted RBP8.72□□□□□ -1.01
CLK4-214ENST00000611575 GRB14Q14449 540 aa8.72□□□□□ -1.01
CLK4-214ENST00000611575 C1orf53Q5VUE5 145 aa8.72□□□□□ -1.01
CLK4-214ENST00000611575 PLEKHH3Q7Z736 793 aa8.72□□□□□ -1.01
CLK4-214ENST00000611575 SCUBE3Q8IX30 993 aa8.72□□□□□ -1.01
CLK4-214ENST00000611575 EPS8L1Q8TE68 723 aa8.72□□□□□ -1.01
CLK4-214ENST00000611575 ARHGAP45Q92619 1136 aa8.72□□□□□ -1.01
CLK4-214ENST00000611575 LPAR1Q92633 364 aa8.72□□□□□ -1.01
CLK4-214ENST00000611575 ZNF512BQ96KM6 892 aaPredicted RBP8.72□□□□□ -1.01
CLK4-214ENST00000611575 ZBTB21Q9ULJ3 1066 aa8.72□□□□□ -1.01
CLK4-214ENST00000611575 NOB1Q9ULX3 412 aaKnown RBP8.72□□□□□ -1.01
CLK4-214ENST00000611575 RABGAP1Q9Y3P9 1069 aa8.72□□□□□ -1.01
CLK4-214ENST00000611575 PCDHB3Q9Y5E6 796 aa8.72□□□□□ -1.01
CLK4-214ENST00000611575 LTBP2Q14767 1821 aa8.72□□□□□ -1.01
CLK4-214ENST00000611575 ATAD5Q96QE3 1844 aa8.71□□□□□ -1.01
CLK4-214ENST00000611575 ZNF236Q9UL36 1845 aa8.71□□□□□ -1.01
CLK4-214ENST00000611575 DNM1LO00429 736 aa8.71□□□□□ -1.02
CLK4-214ENST00000611575 SRGAP3O43295 1099 aa8.71□□□□□ -1.02
CLK4-214ENST00000611575 ANP32CO43423 234 aa8.71□□□□□ -1.02
CLK4-214ENST00000611575 MSCO60682 206 aa8.71□□□□□ -1.02
CLK4-214ENST00000611575 CYBAP13498 195 aa8.71□□□□□ -1.02
CLK4-214ENST00000611575 TEX11Q8IYF3 940 aa8.71□□□□□ -1.02
CLK4-214ENST00000611575 TRPV1Q8NER1 839 aa8.71□□□□□ -1.02
CLK4-214ENST00000611575 USB1Q9BQ65 265 aaKnown RBP8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms