RNA–Protein interactions for RNA: ENST00000610288.4

COL25A1-208, Transcript of collagen type XXV alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL25A1, Length 4,799 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-208ENST00000610288 RPSAP08865 295 aaKnown RBP10.09□□□□□ -0.79
COL25A1-208ENST00000610288 LETM2Q2VYF4 491 aa10.09□□□□□ -0.79
COL25A1-208ENST00000610288 BEND3Q5T5X7 828 aa10.09□□□□□ -0.79
COL25A1-208ENST00000610288 RASIP1Q5U651 963 aa10.09□□□□□ -0.79
COL25A1-208ENST00000610288 NSUN7Q8NE18 718 aaKnown RBP10.09□□□□□ -0.79
COL25A1-208ENST00000610288 DTNBP1Q96EV8 351 aa10.09□□□□□ -0.79
COL25A1-208ENST00000610288 MPHOSPH6Q99547 160 aaKnown RBP10.09□□□□□ -0.79
COL25A1-208ENST00000610288 KIF2CQ99661 725 aa10.09□□□□□ -0.79
COL25A1-208ENST00000610288 CLIC4Q9Y696 253 aa10.09□□□□□ -0.79
COL25A1-208ENST00000610288 PARP3Q9Y6F1 533 aa10.09□□□□□ -0.79
COL25A1-208ENST00000610288 PDIA3P30101 505 aaKnown RBP10.09□□□□□ -0.79
COL25A1-208ENST00000610288 GUCY2FP51841 1108 aa10.09□□□□□ -0.79
COL25A1-208ENST00000610288 DENND2CQ68D51 928 aa10.09□□□□□ -0.79
COL25A1-208ENST00000610288 ARMC9Q7Z3E5 817 aa10.09□□□□□ -0.79
COL25A1-208ENST00000610288 LINC00301Q8NCQ3 95 aa10.09□□□□□ -0.79
COL25A1-208ENST00000610288 SYNCQ9H7C4 482 aa10.09□□□□□ -0.79
COL25A1-208ENST00000610288 TMEM110-MUSTN1A8MSY1 372 aa10.09□□□□□ -0.79
COL25A1-208ENST00000610288 PDE8AO60658 829 aa10.09□□□□□ -0.79
COL25A1-208ENST00000610288 FLOT1O75955 427 aa10.09□□□□□ -0.79
COL25A1-208ENST00000610288 PARP1P09874 1014 aaKnown RBP10.09□□□□□ -0.79
COL25A1-208ENST00000610288 PIK3AP1Q6ZUJ8 805 aa10.09□□□□□ -0.79
COL25A1-208ENST00000610288 C2CD5Q86YS7 1000 aa10.09□□□□□ -0.79
COL25A1-208ENST00000610288 V9GY48 417 aaPredicted RBP10.09□□□□□ -0.79
COL25A1-208ENST00000610288 TTC37Q6PGP7 1564 aa10.09□□□□□ -0.79
COL25A1-208ENST00000610288 RGS16O15492 202 aaPredicted RBP10.09□□□□□ -0.79
COL25A1-208ENST00000610288 PRDM1O75626 825 aa10.09□□□□□ -0.79
COL25A1-208ENST00000610288 KLHL30Q0D2K2 578 aa10.09□□□□□ -0.79
COL25A1-208ENST00000610288 NAA30Q147X3 362 aaPredicted RBP10.09□□□□□ -0.79
COL25A1-208ENST00000610288 ZNF827Q17R98 1081 aa10.09□□□□□ -0.79
COL25A1-208ENST00000610288 TYW1BQ6NUM6 668 aa10.09□□□□□ -0.79
COL25A1-208ENST00000610288 TEX11Q8IYF3 940 aa10.09□□□□□ -0.79
COL25A1-208ENST00000610288 CCDC110Q8TBZ0 833 aa10.09□□□□□ -0.79
COL25A1-208ENST00000610288 ENOX1Q8TC92 643 aaKnown RBP10.09□□□□□ -0.79
COL25A1-208ENST00000610288 ZNF496Q96IT1 587 aaPredicted RBP10.09□□□□□ -0.79
COL25A1-208ENST00000610288 CALR3Q96L12 384 aaKnown RBP10.09□□□□□ -0.79
COL25A1-208ENST00000610288 PARP2Q9UGN5 583 aa10.09□□□□□ -0.79
COL25A1-208ENST00000610288 GNPATO15228 680 aa10.08□□□□□ -0.8
COL25A1-208ENST00000610288 ATP2A2P16615 1042 aaKnown RBP10.08□□□□□ -0.8
COL25A1-208ENST00000610288 CASP14P31944 242 aa10.08□□□□□ -0.8
COL25A1-208ENST00000610288 RWDD2BP57060 319 aa10.08□□□□□ -0.8
COL25A1-208ENST00000610288 EIF4A1P60842 406 aaKnown RBP10.08□□□□□ -0.8
COL25A1-208ENST00000610288 MUM1L1Q5H9M0 696 aa10.08□□□□□ -0.8
COL25A1-208ENST00000610288 SFMBT2Q5VUG0 894 aa10.08□□□□□ -0.8
COL25A1-208ENST00000610288 UBL4BQ8N7F7 174 aa10.08□□□□□ -0.8
COL25A1-208ENST00000610288 CCHCR1Q8TD31 782 aa10.08□□□□□ -0.8
COL25A1-208ENST00000610288 GSDMAQ96QA5 445 aa10.08□□□□□ -0.8
COL25A1-208ENST00000610288 RAB3IPQ96QF0 476 aaPredicted RBP10.08□□□□□ -0.8
COL25A1-208ENST00000610288 PANX2Q96RD6 677 aa10.08□□□□□ -0.8
COL25A1-208ENST00000610288 TRIM31Q9BZY9 425 aa10.08□□□□□ -0.8
COL25A1-208ENST00000610288 ABCB6Q9NP58 842 aa10.08□□□□□ -0.8
COL25A1-208ENST00000610288 USH1CQ9Y6N9 552 aa10.08□□□□□ -0.8
COL25A1-208ENST00000610288 ARHGEF10O15013 1369 aa10.08□□□□□ -0.8
COL25A1-208ENST00000610288 RFC1P35251 1148 aaPredicted RBP10.08□□□□□ -0.8
COL25A1-208ENST00000610288 RANBP1P43487 201 aa10.08□□□□□ -0.8
COL25A1-208ENST00000610288 IFT88Q13099 833 aa10.08□□□□□ -0.8
COL25A1-208ENST00000610288 PEX26Q7Z412 305 aa10.08□□□□□ -0.8
COL25A1-208ENST00000610288 STAG1Q8WVM7 1258 aa10.08□□□□□ -0.8
COL25A1-208ENST00000610288 JDP2Q8WYK2 163 aa10.08□□□□□ -0.8
COL25A1-208ENST00000610288 MCUR1Q96AQ8 359 aa10.08□□□□□ -0.8
COL25A1-208ENST00000610288 KCNJ14Q9UNX9 436 aa10.08□□□□□ -0.8
COL25A1-208ENST00000610288 CLASP1Q7Z460 1538 aa10.08□□□□□ -0.8
COL25A1-208ENST00000610288 UNC13AQ9UPW8 1703 aa10.08□□□□□ -0.8
COL25A1-208ENST00000610288 CTIFO43310 598 aaKnown RBP10.08□□□□□ -0.8
COL25A1-208ENST00000610288 LARGE1O95461 756 aa10.08□□□□□ -0.8
COL25A1-208ENST00000610288 ZMYM6O95789 1325 aa10.08□□□□□ -0.8
COL25A1-208ENST00000610288 HIBADHP31937 336 aaKnown RBP10.08□□□□□ -0.8
COL25A1-208ENST00000610288 BAG6P46379 1132 aa10.08□□□□□ -0.8
COL25A1-208ENST00000610288 ARID5BQ14865 1188 aa10.08□□□□□ -0.8
COL25A1-208ENST00000610288 RRAGAQ7L523 313 aa10.08□□□□□ -0.8
COL25A1-208ENST00000610288 FERMT1Q9BQL6 677 aa10.08□□□□□ -0.8
COL25A1-208ENST00000610288 IMPG2Q9BZV3 1241 aa10.08□□□□□ -0.8
COL25A1-208ENST00000610288 CSRNP2Q9H175 543 aa10.08□□□□□ -0.8
COL25A1-208ENST00000610288 MUM1Q2TAK8 710 aa10.07□□□□□ -0.8
COL25A1-208ENST00000610288 RBM26Q5T8P6 1007 aaKnown RBP10.07□□□□□ -0.8
COL25A1-208ENST00000610288 CCDC170Q8IYT3 715 aa10.07□□□□□ -0.8
COL25A1-208ENST00000610288 CCDC63Q8NA47 563 aa10.07□□□□□ -0.8
COL25A1-208ENST00000610288 EDC3Q96F86 508 aaKnown RBP10.07□□□□□ -0.8
COL25A1-208ENST00000610288 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.07□□□□□ -0.8
COL25A1-208ENST00000610288 COPB1P53618 953 aaKnown RBP10.07□□□□□ -0.8
COL25A1-208ENST00000610288 ALS2CLQ60I27 953 aa10.07□□□□□ -0.8
COL25A1-208ENST00000610288 STAMQ92783 540 aa10.07□□□□□ -0.8
COL25A1-208ENST00000610288 ARHGEF2Q92974 986 aaKnown RBP10.07□□□□□ -0.8
COL25A1-208ENST00000610288 EYA3Q99504 573 aa10.07□□□□□ -0.8
COL25A1-208ENST00000610288 NAP1L4Q99733 375 aaKnown RBP10.07□□□□□ -0.8
COL25A1-208ENST00000610288 SAP30BPQ9UHR5 308 aaKnown RBP10.07□□□□□ -0.8
COL25A1-208ENST00000610288 TNFAIP3P21580 790 aa10.07□□□□□ -0.8
COL25A1-208ENST00000610288 ELF1P32519 619 aa10.07□□□□□ -0.8
COL25A1-208ENST00000610288 MRPL12P52815 198 aaKnown RBP10.07□□□□□ -0.8
COL25A1-208ENST00000610288 FNBP4Q8N3X1 1017 aaPredicted RBP10.07□□□□□ -0.8
COL25A1-208ENST00000610288 HAUS7Q99871 368 aa10.07□□□□□ -0.8
COL25A1-208ENST00000610288 BATF3Q9NR55 127 aa10.07□□□□□ -0.8
COL25A1-208ENST00000610288 FAM207AQ9NSI2 230 aaPredicted RBP10.07□□□□□ -0.8
COL25A1-208ENST00000610288 KLHL14Q9P2G3 628 aa10.07□□□□□ -0.8
COL25A1-208ENST00000610288 DISP1Q96F81 1524 aa10.07□□□□□ -0.8
COL25A1-208ENST00000610288 CARMIL3Q8ND23 1372 aa10.07□□□□□ -0.8
COL25A1-208ENST00000610288 GTPBP6O43824 516 aaPredicted RBP10.07□□□□□ -0.8
COL25A1-208ENST00000610288 CLTAP09496 248 aa10.07□□□□□ -0.8
COL25A1-208ENST00000610288 HSPD1P10809 573 aaKnown RBP10.07□□□□□ -0.8
COL25A1-208ENST00000610288 EPB41P11171 864 aaKnown RBP10.07□□□□□ -0.8
COL25A1-208ENST00000610288 E2F5Q15329 346 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms