RNA–Protein interactions for RNA: ENST00000609081.1

LMBR1-220, Transcript of limb development membrane protein 1, humanhuman

TSL 3

Gene LMBR1, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-220ENST00000609081 CYP2B6P20813 491 aa17.92■□□□□ 0.46
LMBR1-220ENST00000609081 PTPREP23469 700 aa17.92■□□□□ 0.46
LMBR1-220ENST00000609081 COPB2P35606 906 aa17.92■□□□□ 0.46
LMBR1-220ENST00000609081 KLRC3Q07444 240 aa17.92■□□□□ 0.46
LMBR1-220ENST00000609081 NMIQ13287 307 aaPredicted RBP17.92■□□□□ 0.46
LMBR1-220ENST00000609081 VPS53Q5VIR6 699 aa17.92■□□□□ 0.46
LMBR1-220ENST00000609081 PRPF38BQ5VTL8 546 aaKnown RBP17.92■□□□□ 0.46
LMBR1-220ENST00000609081 GMCL1P1Q8NEA9 526 aa17.92■□□□□ 0.46
LMBR1-220ENST00000609081 U2AF1L4Q8WU68 220 aaKnown RBP17.92■□□□□ 0.46
LMBR1-220ENST00000609081 CEP95Q96GE4 821 aa17.92■□□□□ 0.46
LMBR1-220ENST00000609081 HMX1Q9NP08 348 aaPredicted RBP17.92■□□□□ 0.46
LMBR1-220ENST00000609081 DIAPH3Q9NSV4 1193 aa17.92■□□□□ 0.46
LMBR1-220ENST00000609081 CLIP2Q9UDT6 1046 aa17.92■□□□□ 0.46
LMBR1-220ENST00000609081 PPP1R9AQ9ULJ8 1098 aa17.92■□□□□ 0.46
LMBR1-220ENST00000609081 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.92■□□□□ 0.46
LMBR1-220ENST00000609081 ZNF236Q9UL36 1845 aa17.92■□□□□ 0.46
LMBR1-220ENST00000609081 RPTORQ8N122 1335 aa17.92■□□□□ 0.46
LMBR1-220ENST00000609081 ORC4O43929 436 aa17.91■□□□□ 0.46
LMBR1-220ENST00000609081 RAD21O60216 631 aa17.91■□□□□ 0.46
LMBR1-220ENST00000609081 HOXC6P09630 235 aa17.91■□□□□ 0.46
LMBR1-220ENST00000609081 FGRP09769 529 aa17.91■□□□□ 0.46
LMBR1-220ENST00000609081 HSPD1P10809 573 aaKnown RBP17.91■□□□□ 0.46
LMBR1-220ENST00000609081 TFAP4Q01664 338 aa17.91■□□□□ 0.46
LMBR1-220ENST00000609081 GRB14Q14449 540 aa17.91■□□□□ 0.46
LMBR1-220ENST00000609081 WDR78Q5VTH9 848 aa17.91■□□□□ 0.46
LMBR1-220ENST00000609081 ABRAQ8N0Z2 381 aa17.91■□□□□ 0.46
LMBR1-220ENST00000609081 TRIB2Q92519 343 aa17.91■□□□□ 0.46
LMBR1-220ENST00000609081 MOV10L1Q9BXT6 1211 aaKnown RBP17.91■□□□□ 0.46
LMBR1-220ENST00000609081 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.91■□□□□ 0.46
LMBR1-220ENST00000609081 SLC5A4Q9NY91 659 aa17.91■□□□□ 0.46
LMBR1-220ENST00000609081 TSPY2A6NKD2 308 aa17.9■□□□□ 0.46
LMBR1-220ENST00000609081 FGAP02671 866 aa17.9■□□□□ 0.46
LMBR1-220ENST00000609081 FAM83BQ5T0W9 1011 aa17.9■□□□□ 0.46
LMBR1-220ENST00000609081 MAP3K21Q5TCX8 1036 aa17.9■□□□□ 0.46
LMBR1-220ENST00000609081 SHISA4Q96DD7 197 aa17.9■□□□□ 0.46
LMBR1-220ENST00000609081 ATG4CQ96DT6 458 aa17.9■□□□□ 0.46
LMBR1-220ENST00000609081 COL11A1P12107 1806 aaPredicted RBP17.89■□□□□ 0.45
LMBR1-220ENST00000609081 VWA5AO00534 786 aa17.89■□□□□ 0.45
LMBR1-220ENST00000609081 NDUFB10O96000 172 aa17.89■□□□□ 0.45
LMBR1-220ENST00000609081 FDX1P10109 184 aa17.89■□□□□ 0.45
LMBR1-220ENST00000609081 PRPF38AQ8NAV1 312 aaKnown RBP17.89■□□□□ 0.45
LMBR1-220ENST00000609081 DEFB118Q96PH6 123 aa17.89■□□□□ 0.45
LMBR1-220ENST00000609081 SLF1Q9BQI6 1058 aa17.89■□□□□ 0.45
LMBR1-220ENST00000609081 CRISPLD2Q9H0B8 497 aa17.89■□□□□ 0.45
LMBR1-220ENST00000609081 ERCC3P19447 782 aa17.88■□□□□ 0.45
LMBR1-220ENST00000609081 CTDSPL2Q05D32 466 aa17.88■□□□□ 0.45
LMBR1-220ENST00000609081 PLS1Q14651 629 aa17.88■□□□□ 0.45
LMBR1-220ENST00000609081 FAM47AQ5JRC9 791 aa17.88■□□□□ 0.45
LMBR1-220ENST00000609081 MFSD14CQ5VZR4 134 aa17.88■□□□□ 0.45
LMBR1-220ENST00000609081 ZNF589Q86UQ0 364 aaPredicted RBP17.88■□□□□ 0.45
LMBR1-220ENST00000609081 RIOX2Q8IUF8 465 aa17.88■□□□□ 0.45
LMBR1-220ENST00000609081 ANKLE1Q8NAG6 615 aa17.88■□□□□ 0.45
LMBR1-220ENST00000609081 RNF41Q9H4P4 317 aaPredicted RBP17.88■□□□□ 0.45
LMBR1-220ENST00000609081 FEM1BQ9UK73 627 aa17.88■□□□□ 0.45
LMBR1-220ENST00000609081 RANBP6O60518 1105 aaKnown RBP17.87■□□□□ 0.45
LMBR1-220ENST00000609081 TFRCP02786 760 aaKnown RBP17.87■□□□□ 0.45
LMBR1-220ENST00000609081 FCER1AP12319 257 aa17.87■□□□□ 0.45
LMBR1-220ENST00000609081 PRKAR2AP13861 404 aaKnown RBP17.87■□□□□ 0.45
LMBR1-220ENST00000609081 IRX6P78412 446 aaPredicted RBP17.87■□□□□ 0.45
LMBR1-220ENST00000609081 TMEM132BQ14DG7 1078 aa17.87■□□□□ 0.45
LMBR1-220ENST00000609081 CWC27Q6UX04 472 aaKnown RBP17.87■□□□□ 0.45
LMBR1-220ENST00000609081 NCAPG2Q86XI2 1143 aa17.87■□□□□ 0.45
LMBR1-220ENST00000609081 GMCL1Q96IK5 515 aa17.87■□□□□ 0.45
LMBR1-220ENST00000609081 HTATIP2Q9BUP3 242 aa17.87■□□□□ 0.45
LMBR1-220ENST00000609081 FBXO28Q9NVF7 368 aa17.87■□□□□ 0.45
LMBR1-220ENST00000609081 ATP2A1O14983 1001 aa17.86■□□□□ 0.45
LMBR1-220ENST00000609081 FARP2O94887 1054 aaPredicted RBP17.86■□□□□ 0.45
LMBR1-220ENST00000609081 ADORA2AP29274 412 aa17.86■□□□□ 0.45
LMBR1-220ENST00000609081 STAT3P40763 770 aa17.86■□□□□ 0.45
LMBR1-220ENST00000609081 NOVP48745 357 aa17.86■□□□□ 0.45
LMBR1-220ENST00000609081 TTC22Q5TAA0 569 aa17.86■□□□□ 0.45
LMBR1-220ENST00000609081 OLFML2BQ68BL8 750 aa17.86■□□□□ 0.45
LMBR1-220ENST00000609081 UBE2Q1Q7Z7E8 422 aa17.86■□□□□ 0.45
LMBR1-220ENST00000609081 DPP9Q86TI2 863 aa17.86■□□□□ 0.45
LMBR1-220ENST00000609081 DSCC1Q9BVC3 393 aa17.86■□□□□ 0.45
LMBR1-220ENST00000609081 TEX13BQ9BXU2 312 aa17.86■□□□□ 0.45
LMBR1-220ENST00000609081 TCP11L1Q9NUJ3 509 aa17.86■□□□□ 0.45
LMBR1-220ENST00000609081 ZNF214Q9UL59 606 aaPredicted RBP17.86■□□□□ 0.45
LMBR1-220ENST00000609081 STX8Q9UNK0 236 aa17.86■□□□□ 0.45
LMBR1-220ENST00000609081 CTDP1Q9Y5B0 961 aaPredicted RBP17.86■□□□□ 0.45
LMBR1-220ENST00000609081 ZNFX1Q9P2E3 1918 aaKnown RBP17.86■□□□□ 0.45
LMBR1-220ENST00000609081 PLA2G6O60733 806 aa17.85■□□□□ 0.45
LMBR1-220ENST00000609081 ZBED4O75132 1171 aa17.85■□□□□ 0.45
LMBR1-220ENST00000609081 BMP3P12645 472 aa17.85■□□□□ 0.45
LMBR1-220ENST00000609081 CACNB2Q08289 660 aaPredicted RBP17.85■□□□□ 0.45
LMBR1-220ENST00000609081 LAMA4Q16363 1823 aa17.85■□□□□ 0.45
LMBR1-220ENST00000609081 AKNAD1Q5T1N1 836 aa17.85■□□□□ 0.45
LMBR1-220ENST00000609081 SLFN13Q68D06 897 aa17.85■□□□□ 0.45
LMBR1-220ENST00000609081 SAMD1Q6SPF0 538 aaPredicted RBP17.85■□□□□ 0.45
LMBR1-220ENST00000609081 MFSD6Q6ZSS7 791 aa17.85■□□□□ 0.45
LMBR1-220ENST00000609081 FAM160B2Q86V87 743 aa17.85■□□□□ 0.45
LMBR1-220ENST00000609081 LRRC47Q8N1G4 583 aaKnown RBP17.85■□□□□ 0.45
LMBR1-220ENST00000609081 CHURC1Q8WUH1 139 aa17.85■□□□□ 0.45
LMBR1-220ENST00000609081 STAG1Q8WVM7 1258 aa17.85■□□□□ 0.45
LMBR1-220ENST00000609081 RAD50Q92878 1312 aa17.85■□□□□ 0.45
LMBR1-220ENST00000609081 TOMM22Q9NS69 142 aa17.85■□□□□ 0.45
LMBR1-220ENST00000609081 CTNNA3Q9UI47 895 aa17.85■□□□□ 0.45
LMBR1-220ENST00000609081 ZNF213O14771 459 aa17.84■□□□□ 0.45
LMBR1-220ENST00000609081 MSCO60682 206 aa17.84■□□□□ 0.45
LMBR1-220ENST00000609081 PDE4AP27815 886 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms