RNA–Protein interactions for RNA: ENST00000608903.5

CTCFL-221, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best) BASIC

Gene CTCFL, Length 2,135 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-221ENST00000608903 FOXD4L4Q8WXT5 416 aaPredicted RBP13.43□□□□□ -0.26
CTCFL-221ENST00000608903 TNPO1Q92973 898 aaKnown RBP13.43□□□□□ -0.26
CTCFL-221ENST00000608903 CHAMP1Q96JM3 812 aa13.43□□□□□ -0.26
CTCFL-221ENST00000608903 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.43□□□□□ -0.26
CTCFL-221ENST00000608903 MTMR6Q9Y217 621 aa13.43□□□□□ -0.26
CTCFL-221ENST00000608903 SLC16A2P36021 539 aa13.42□□□□□ -0.26
CTCFL-221ENST00000608903 HMGN5P82970 282 aaKnown RBP13.42□□□□□ -0.26
CTCFL-221ENST00000608903 SSRP1Q08945 709 aaKnown RBP13.42□□□□□ -0.26
CTCFL-221ENST00000608903 MAP3K11Q16584 847 aa13.42□□□□□ -0.26
CTCFL-221ENST00000608903 LARP1BQ659C4 914 aaKnown RBP13.42□□□□□ -0.26
CTCFL-221ENST00000608903 PIBF1Q8WXW3 757 aa13.42□□□□□ -0.26
CTCFL-221ENST00000608903 ARHGEF10LQ9HCE6 1279 aa13.42□□□□□ -0.26
CTCFL-221ENST00000608903 GINM1Q9NU53 330 aa13.42□□□□□ -0.26
CTCFL-221ENST00000608903 MYH6P13533 1939 aa13.42□□□□□ -0.26
CTCFL-221ENST00000608903 STK36Q9NRP7 1315 aa13.42□□□□□ -0.26
CTCFL-221ENST00000608903 PRPF3O43395 683 aaKnown RBP13.42□□□□□ -0.26
CTCFL-221ENST00000608903 RAD21O60216 631 aa13.42□□□□□ -0.26
CTCFL-221ENST00000608903 BRD1O95696 1058 aa13.42□□□□□ -0.26
CTCFL-221ENST00000608903 KIF5BP33176 963 aa13.42□□□□□ -0.26
CTCFL-221ENST00000608903 SPP2Q13103 211 aa13.42□□□□□ -0.26
CTCFL-221ENST00000608903 PPP4R3BQ5MIZ7 849 aa13.42□□□□□ -0.26
CTCFL-221ENST00000608903 VCPKMTQ9H867 229 aa13.42□□□□□ -0.26
CTCFL-221ENST00000608903 EMILIN3Q9NT22 766 aa13.42□□□□□ -0.26
CTCFL-221ENST00000608903 ZHX2Q9Y6X8 837 aa13.42□□□□□ -0.26
CTCFL-221ENST00000608903 STX6O43752 255 aa13.41□□□□□ -0.26
CTCFL-221ENST00000608903 PPP1R12BO60237 982 aaPredicted RBP13.41□□□□□ -0.26
CTCFL-221ENST00000608903 GUCY1B3Q02153 619 aa13.41□□□□□ -0.26
CTCFL-221ENST00000608903 DCAF4Q8WV16 495 aa13.41□□□□□ -0.26
CTCFL-221ENST00000608903 GMCL1Q96IK5 515 aa13.41□□□□□ -0.26
CTCFL-221ENST00000608903 WDR18Q9BV38 432 aa13.41□□□□□ -0.26
CTCFL-221ENST00000608903 RNF26Q9BY78 433 aaPredicted RBP13.41□□□□□ -0.26
CTCFL-221ENST00000608903 ZNF408Q9H9D4 720 aa13.41□□□□□ -0.26
CTCFL-221ENST00000608903 KIF3CO14782 793 aa13.4□□□□□ -0.26
CTCFL-221ENST00000608903 CDKL5O76039 1030 aa13.4□□□□□ -0.26
CTCFL-221ENST00000608903 CCDC96Q2M329 555 aa13.4□□□□□ -0.26
CTCFL-221ENST00000608903 ASPRV1Q53RT3 343 aa13.4□□□□□ -0.26
CTCFL-221ENST00000608903 LDLRAD1Q5T700 205 aa13.4□□□□□ -0.26
CTCFL-221ENST00000608903 CST9Q5W186 159 aa13.4□□□□□ -0.26
CTCFL-221ENST00000608903 CPLX2Q6PUV4 134 aaKnown RBP13.4□□□□□ -0.26
CTCFL-221ENST00000608903 FAM184AQ8NB25 1140 aa13.4□□□□□ -0.26
CTCFL-221ENST00000608903 ALG1Q9BT22 464 aa13.4□□□□□ -0.26
CTCFL-221ENST00000608903 KIAA1683Q9H0B3 1180 aa13.4□□□□□ -0.26
CTCFL-221ENST00000608903 RIOX1Q9H6W3 641 aa13.4□□□□□ -0.26
CTCFL-221ENST00000608903 VAT1LQ9HCJ6 419 aa13.4□□□□□ -0.26
CTCFL-221ENST00000608903 PICK1Q9NRD5 415 aa13.4□□□□□ -0.26
CTCFL-221ENST00000608903 SYNPO2Q9UMS6 1093 aa13.4□□□□□ -0.26
CTCFL-221ENST00000608903 AFG3L2Q9Y4W6 797 aa13.4□□□□□ -0.26
CTCFL-221ENST00000608903 ADAMTS3O15072 1205 aa13.4□□□□□ -0.26
CTCFL-221ENST00000608903 SLC1A4P43007 532 aa13.4□□□□□ -0.26
CTCFL-221ENST00000608903 IREB2P48200 963 aaKnown RBP13.4□□□□□ -0.26
CTCFL-221ENST00000608903 MTMR2Q13614 643 aa13.4□□□□□ -0.26
CTCFL-221ENST00000608903 TTLL12Q14166 644 aaPredicted RBP13.4□□□□□ -0.26
CTCFL-221ENST00000608903 FAM83BQ5T0W9 1011 aa13.4□□□□□ -0.26
CTCFL-221ENST00000608903 CHADLQ6NUI6 762 aa13.4□□□□□ -0.26
CTCFL-221ENST00000608903 SPZ1Q9BXG8 430 aa13.4□□□□□ -0.26
CTCFL-221ENST00000608903 ELP3Q9H9T3 547 aa13.4□□□□□ -0.26
CTCFL-221ENST00000608903 JMJD4Q9H9V9 463 aa13.4□□□□□ -0.26
CTCFL-221ENST00000608903 TRIM75PA6NK02 468 aa13.39□□□□□ -0.27
CTCFL-221ENST00000608903 USP17L10C9JJH3 530 aa13.39□□□□□ -0.27
CTCFL-221ENST00000608903 BMP3P12645 472 aa13.39□□□□□ -0.27
CTCFL-221ENST00000608903 NF2P35240 595 aa13.39□□□□□ -0.27
CTCFL-221ENST00000608903 GNAQP50148 359 aa13.39□□□□□ -0.27
CTCFL-221ENST00000608903 ADGRF4Q8IZF3 695 aa13.39□□□□□ -0.27
CTCFL-221ENST00000608903 ZNF280CQ8ND82 737 aa13.39□□□□□ -0.27
CTCFL-221ENST00000608903 PIGSQ96S52 555 aa13.39□□□□□ -0.27
CTCFL-221ENST00000608903 DEXIO95424 95 aa13.39□□□□□ -0.27
CTCFL-221ENST00000608903 GJA5P36382 358 aa13.39□□□□□ -0.27
CTCFL-221ENST00000608903 BACE1P56817 501 aa13.39□□□□□ -0.27
CTCFL-221ENST00000608903 SNAP25P60880 206 aa13.39□□□□□ -0.27
CTCFL-221ENST00000608903 TYW1BQ6NUM6 668 aa13.39□□□□□ -0.27
CTCFL-221ENST00000608903 MTMR8Q96EF0 704 aa13.39□□□□□ -0.27
CTCFL-221ENST00000608903 LZTS2Q9BRK4 669 aa13.39□□□□□ -0.27
CTCFL-221ENST00000608903 GOPCQ9HD26 462 aa13.39□□□□□ -0.27
CTCFL-221ENST00000608903 FBXO28Q9NVF7 368 aa13.39□□□□□ -0.27
CTCFL-221ENST00000608903 PTPRFP10586 1907 aa13.38□□□□□ -0.27
CTCFL-221ENST00000608903 VPS37CA5D8V6 355 aaPredicted RBP13.38□□□□□ -0.27
CTCFL-221ENST00000608903 TMEM232C9JQI7 657 aa13.38□□□□□ -0.27
CTCFL-221ENST00000608903 PPP1R11O60927 126 aaPredicted RBP13.38□□□□□ -0.27
CTCFL-221ENST00000608903 CELF2O95319 508 aaKnown RBP13.38□□□□□ -0.27
CTCFL-221ENST00000608903 ZSCAN22P10073 491 aaPredicted RBP13.38□□□□□ -0.27
CTCFL-221ENST00000608903 SMARCA1P28370 1054 aa13.38□□□□□ -0.27
CTCFL-221ENST00000608903 NUCB2P80303 420 aa13.38□□□□□ -0.27
CTCFL-221ENST00000608903 PFKFB3Q16875 520 aaPredicted RBP13.38□□□□□ -0.27
CTCFL-221ENST00000608903 GPATCH4Q5T3I0 446 aaKnown RBP13.38□□□□□ -0.27
CTCFL-221ENST00000608903 BTNL9Q6UXG8 535 aa13.38□□□□□ -0.27
CTCFL-221ENST00000608903 TRIM22Q8IYM9 498 aa13.38□□□□□ -0.27
CTCFL-221ENST00000608903 ANKRD13AQ8IZ07 590 aa13.38□□□□□ -0.27
CTCFL-221ENST00000608903 FBXO18Q8NFZ0 1043 aa13.38□□□□□ -0.27
CTCFL-221ENST00000608903 GPKOWQ92917 476 aaPredicted RBP eCLIP13.38□□□□□ -0.27
CTCFL-221ENST00000608903 FEZ1Q99689 392 aa13.38□□□□□ -0.27
CTCFL-221ENST00000608903 VPS54Q9P1Q0 977 aa13.38□□□□□ -0.27
CTCFL-221ENST00000608903 KCNJ14Q9UNX9 436 aa13.38□□□□□ -0.27
CTCFL-221ENST00000608903 KRT40Q6A162 431 aa13.37□□□□□ -0.27
CTCFL-221ENST00000608903 ARMC9Q7Z3E5 817 aa13.37□□□□□ -0.27
CTCFL-221ENST00000608903 FERMT3Q86UX7 667 aa13.37□□□□□ -0.27
CTCFL-221ENST00000608903 C8orf76Q96K31 380 aa13.37□□□□□ -0.27
CTCFL-221ENST00000608903 GPBP1L1Q9HC44 474 aaPredicted RBP13.37□□□□□ -0.27
CTCFL-221ENST00000608903 CSADQ9Y600 493 aa13.37□□□□□ -0.27
CTCFL-221ENST00000608903 SMCHD1A6NHR9 2005 aa13.37□□□□□ -0.27
CTCFL-221ENST00000608903 KIF28PB7ZC32 967 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms