RNA–Protein interactions for RNA: ENST00000606801.1

RNU6-88P-201, Transcript of RNA, U6 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU6-88P, Length 100 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-88P-201ENST00000606801 SMARCC1Q92922 1105 aaPredicted RBP6.03□□□□□ -1.44
RNU6-88P-201ENST00000606801 COX4I2Q96KJ9 171 aa6.03□□□□□ -1.44
RNU6-88P-201ENST00000606801 HAUS7Q99871 368 aa6.03□□□□□ -1.44
RNU6-88P-201ENST00000606801 LRRC4CQ9HCJ2 640 aa6.03□□□□□ -1.44
RNU6-88P-201ENST00000606801 MINPP1Q9UNW1 487 aa6.03□□□□□ -1.44
RNU6-88P-201ENST00000606801 CDK11AQ9UQ88 783 aaPredicted RBP6.03□□□□□ -1.44
RNU6-88P-201ENST00000606801 PRNPP04156 253 aa6.02□□□□□ -1.45
RNU6-88P-201ENST00000606801 CEACAM5P06731 702 aa6.02□□□□□ -1.45
RNU6-88P-201ENST00000606801 CD247P20963 164 aa6.02□□□□□ -1.45
RNU6-88P-201ENST00000606801 GP2P55259 537 aaKnown RBP6.02□□□□□ -1.45
RNU6-88P-201ENST00000606801 RNF4P78317 190 aa6.02□□□□□ -1.45
RNU6-88P-201ENST00000606801 BBS9Q3SYG4 887 aa6.02□□□□□ -1.45
RNU6-88P-201ENST00000606801 MFSD4AQ8N468 514 aa6.02□□□□□ -1.45
RNU6-88P-201ENST00000606801 FGD4Q96M96 766 aa6.02□□□□□ -1.45
RNU6-88P-201ENST00000606801 MKRN2Q9H000 416 aaKnown RBP6.02□□□□□ -1.45
RNU6-88P-201ENST00000606801 ZSWIM4Q9H7M6 989 aa6.02□□□□□ -1.45
RNU6-88P-201ENST00000606801 GP6Q9HCN6 339 aa6.02□□□□□ -1.45
RNU6-88P-201ENST00000606801 SEMA3GQ9NS98 782 aa6.02□□□□□ -1.45
RNU6-88P-201ENST00000606801 BSDC1Q9NW68 430 aaPredicted RBP6.02□□□□□ -1.45
RNU6-88P-201ENST00000606801 SNTG2Q9NY99 539 aa6.02□□□□□ -1.45
RNU6-88P-201ENST00000606801 CCDC39Q9UFE4 941 aa6.02□□□□□ -1.45
RNU6-88P-201ENST00000606801 SUSD5O60279 629 aa6.01□□□□□ -1.45
RNU6-88P-201ENST00000606801 ITIH2P19823 946 aa6.01□□□□□ -1.45
RNU6-88P-201ENST00000606801 ZNF445P59923 1031 aa6.01□□□□□ -1.45
RNU6-88P-201ENST00000606801 RASGRF1Q13972 1273 aa6.01□□□□□ -1.45
RNU6-88P-201ENST00000606801 BMS1Q14692 1282 aaKnown RBP6.01□□□□□ -1.45
RNU6-88P-201ENST00000606801 LRP10Q7Z4F1 713 aa6.01□□□□□ -1.45
RNU6-88P-201ENST00000606801 PIWIL2Q8TC59 973 aaKnown RBP6.01□□□□□ -1.45
RNU6-88P-201ENST00000606801 NETO1Q8TDF5 533 aa6.01□□□□□ -1.45
RNU6-88P-201ENST00000606801 HSPA12BQ96MM6 686 aa6.01□□□□□ -1.45
RNU6-88P-201ENST00000606801 DEPDC7Q96QD5 511 aa6.01□□□□□ -1.45
RNU6-88P-201ENST00000606801 GPR62Q9BZJ7 368 aa6.01□□□□□ -1.45
RNU6-88P-201ENST00000606801 APEX2Q9UBZ4 518 aa6.01□□□□□ -1.45
RNU6-88P-201ENST00000606801 LOC105371045A0A1W2PR82 267 aa6□□□□□ -1.45
RNU6-88P-201ENST00000606801 CCDC85CA6NKD9 419 aa6□□□□□ -1.45
RNU6-88P-201ENST00000606801 GNAT3A8MTJ3 354 aa6□□□□□ -1.45
RNU6-88P-201ENST00000606801 PDPK1O15530 556 aa6□□□□□ -1.45
RNU6-88P-201ENST00000606801 CAPNS1P04632 268 aa6□□□□□ -1.45
RNU6-88P-201ENST00000606801 SLC10A6Q3KNW5 377 aa6□□□□□ -1.45
RNU6-88P-201ENST00000606801 CDKAL1Q5VV42 579 aa6□□□□□ -1.45
RNU6-88P-201ENST00000606801 SPATC1Q76KD6 591 aa6□□□□□ -1.45
RNU6-88P-201ENST00000606801 WFDC3Q8IUB2 231 aa6□□□□□ -1.45
RNU6-88P-201ENST00000606801 BRF1Q92994 677 aa6□□□□□ -1.45
RNU6-88P-201ENST00000606801 LGR4Q9BXB1 951 aa6□□□□□ -1.45
RNU6-88P-201ENST00000606801 OAS3Q9Y6K5 1087 aaKnown RBP6□□□□□ -1.45
RNU6-88P-201ENST00000606801 ANKRD34BA5PLL1 514 aa5.99□□□□□ -1.45
RNU6-88P-201ENST00000606801 U2SURPO15042 1029 aaKnown RBP5.99□□□□□ -1.45
RNU6-88P-201ENST00000606801 NMIQ13287 307 aaPredicted RBP5.99□□□□□ -1.45
RNU6-88P-201ENST00000606801 HEATR6Q6AI08 1181 aaKnown RBP5.99□□□□□ -1.45
RNU6-88P-201ENST00000606801 GIMAP6Q6P9H5 292 aa5.99□□□□□ -1.45
RNU6-88P-201ENST00000606801 NFXL1Q6ZNB6 911 aa5.99□□□□□ -1.45
RNU6-88P-201ENST00000606801 VSIG10LQ86VR7 867 aa5.99□□□□□ -1.45
RNU6-88P-201ENST00000606801 LILRB2Q8N423 598 aa5.99□□□□□ -1.45
RNU6-88P-201ENST00000606801 SRPK1Q96SB4 655 aaKnown RBP5.99□□□□□ -1.45
RNU6-88P-201ENST00000606801 HDAC8Q9BY41 377 aa5.99□□□□□ -1.45
RNU6-88P-201ENST00000606801 GFOD1Q9NXC2 390 aa5.99□□□□□ -1.45
RNU6-88P-201ENST00000606801 FBXL21Q9UKT6 434 aa5.99□□□□□ -1.45
RNU6-88P-201ENST00000606801 KCNH3Q9ULD8 1083 aa5.99□□□□□ -1.45
RNU6-88P-201ENST00000606801 ANGEL1Q9UNK9 670 aaKnown RBP5.99□□□□□ -1.45
RNU6-88P-201ENST00000606801 PCDHB12Q9Y5F1 795 aa5.99□□□□□ -1.45
RNU6-88P-201ENST00000606801 FAM155AB1AL88 458 aaPredicted RBP5.98□□□□□ -1.45
RNU6-88P-201ENST00000606801 H3BS24 57 aa5.98□□□□□ -1.45
RNU6-88P-201ENST00000606801 SIGLEC6O43699 453 aa5.98□□□□□ -1.45
RNU6-88P-201ENST00000606801 PRAMEF1O95521 474 aa5.98□□□□□ -1.45
RNU6-88P-201ENST00000606801 CTSKP43235 329 aa5.98□□□□□ -1.45
RNU6-88P-201ENST00000606801 ZNF143P52747 638 aaPredicted RBP5.98□□□□□ -1.45
RNU6-88P-201ENST00000606801 CHMP4BP1P59074 171 aa5.98□□□□□ -1.45
RNU6-88P-201ENST00000606801 IFI16Q16666 785 aaKnown RBP5.98□□□□□ -1.45
RNU6-88P-201ENST00000606801 GAB4Q2WGN9 574 aa5.98□□□□□ -1.45
RNU6-88P-201ENST00000606801 KANSL2Q9H9L4 492 aa5.98□□□□□ -1.45
RNU6-88P-201ENST00000606801 ZMYM5Q9UJ78 669 aa5.98□□□□□ -1.45
RNU6-88P-201ENST00000606801 SNX11Q9Y5W9 270 aa5.98□□□□□ -1.45
RNU6-88P-201ENST00000606801 PITPNM2Q9BZ72 1349 aa5.98□□□□□ -1.45
RNU6-88P-201ENST00000606801 A0A087WZG4 1122 aa5.97□□□□□ -1.45
RNU6-88P-201ENST00000606801 DIAPH1O60610 1272 aaKnown RBP5.97□□□□□ -1.45
RNU6-88P-201ENST00000606801 CD96P40200 585 aa5.97□□□□□ -1.45
RNU6-88P-201ENST00000606801 CLCN7P51798 805 aa5.97□□□□□ -1.45
RNU6-88P-201ENST00000606801 BNIP3Q12983 259 aa5.97□□□□□ -1.45
RNU6-88P-201ENST00000606801 EEPD1Q7L9B9 569 aa5.97□□□□□ -1.45
RNU6-88P-201ENST00000606801 TSPYL5Q86VY4 417 aaPredicted RBP5.97□□□□□ -1.45
RNU6-88P-201ENST00000606801 ARHGEF39Q8N4T4 335 aa5.97□□□□□ -1.45
RNU6-88P-201ENST00000606801 USHBP1Q8N6Y0 703 aa5.97□□□□□ -1.45
RNU6-88P-201ENST00000606801 ST13P5Q8NFI4 369 aaPredicted RBP5.97□□□□□ -1.45
RNU6-88P-201ENST00000606801 ADCY4Q8NFM4 1077 aa5.97□□□□□ -1.45
RNU6-88P-201ENST00000606801 SYTL5Q8TDW5 730 aaPredicted RBP5.97□□□□□ -1.45
RNU6-88P-201ENST00000606801 UBE2FQ969M7 185 aa5.97□□□□□ -1.45
RNU6-88P-201ENST00000606801 MRGPRX3Q96LB0 322 aa5.97□□□□□ -1.45
RNU6-88P-201ENST00000606801 DNAJC7Q99615 494 aa5.97□□□□□ -1.45
RNU6-88P-201ENST00000606801 APBA2Q99767 749 aa5.97□□□□□ -1.45
RNU6-88P-201ENST00000606801 PRR13Q9NZ81 148 aa5.97□□□□□ -1.45
RNU6-88P-201ENST00000606801 WHRNQ9P202 907 aa5.97□□□□□ -1.45
RNU6-88P-201ENST00000606801 ZSWIM5Q9P217 1185 aa5.97□□□□□ -1.45
RNU6-88P-201ENST00000606801 FHOD1Q9Y613 1164 aa5.97□□□□□ -1.45
RNU6-88P-201ENST00000606801 TMEM265A0A087WTH1 108 aa5.96□□□□□ -1.46
RNU6-88P-201ENST00000606801 TBX1O43435 398 aa5.96□□□□□ -1.46
RNU6-88P-201ENST00000606801 ESR1P03372 595 aa5.96□□□□□ -1.46
RNU6-88P-201ENST00000606801 TCEAL1Q15170 157 aa5.96□□□□□ -1.46
RNU6-88P-201ENST00000606801 NFE2L2Q16236 605 aa5.96□□□□□ -1.46
RNU6-88P-201ENST00000606801 ARHGAP27Q6ZUM4 889 aa5.96□□□□□ -1.46
RNU6-88P-201ENST00000606801 SPRED2Q7Z698 418 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms