RNA–Protein interactions for RNA: ENST00000603946.5

NOLC1-208, Transcript of nucleolar and coiled-body phosphoprotein 1, humanhuman

TSL 1 (best)

Gene NOLC1, Length 3,217 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOLC1-208ENST00000603946 CTCFLQ8NI51 663 aaPredicted RBP9.47□□□□□ -0.89
NOLC1-208ENST00000603946 RASGRP4Q8TDF6 673 aa9.47□□□□□ -0.89
NOLC1-208ENST00000603946 PURBQ96QR8 312 aaKnown RBP9.47□□□□□ -0.89
NOLC1-208ENST00000603946 PIGSQ96S52 555 aa9.47□□□□□ -0.89
NOLC1-208ENST00000603946 EMILIN3Q9NT22 766 aa9.47□□□□□ -0.89
NOLC1-208ENST00000603946 SMC3Q9UQE7 1217 aa9.47□□□□□ -0.89
NOLC1-208ENST00000603946 ECM29Q5VYK3 1845 aa9.47□□□□□ -0.89
NOLC1-208ENST00000603946 CTNND1O60716 968 aaKnown RBP9.47□□□□□ -0.89
NOLC1-208ENST00000603946 FLOT1O75955 427 aa9.47□□□□□ -0.89
NOLC1-208ENST00000603946 FGRP09769 529 aa9.47□□□□□ -0.89
NOLC1-208ENST00000603946 BECN1Q14457 450 aa9.47□□□□□ -0.89
NOLC1-208ENST00000603946 TMEM87BQ96K49 555 aa9.47□□□□□ -0.89
NOLC1-208ENST00000603946 ORC3Q9UBD5 711 aaPredicted RBP9.47□□□□□ -0.89
NOLC1-208ENST00000603946 SMCHD1A6NHR9 2005 aa9.47□□□□□ -0.89
NOLC1-208ENST00000603946 DDX60LQ5H9U9 1706 aaKnown RBP9.46□□□□□ -0.89
NOLC1-208ENST00000603946 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.46□□□□□ -0.89
NOLC1-208ENST00000603946 TOMM70O94826 608 aa9.46□□□□□ -0.89
NOLC1-208ENST00000603946 ARMC9Q7Z3E5 817 aa9.46□□□□□ -0.89
NOLC1-208ENST00000603946 FAM184AQ8NB25 1140 aa9.46□□□□□ -0.89
NOLC1-208ENST00000603946 ZNF280CQ8ND82 737 aa9.46□□□□□ -0.89
NOLC1-208ENST00000603946 TBC1D5Q92609 795 aa9.46□□□□□ -0.89
NOLC1-208ENST00000603946 EHD4Q9H223 541 aa9.46□□□□□ -0.89
NOLC1-208ENST00000603946 GDPD2Q9HCC8 539 aa9.46□□□□□ -0.89
NOLC1-208ENST00000603946 LAMA3Q16787 3333 aa9.46□□□□□ -0.89
NOLC1-208ENST00000603946 PARP1P09874 1014 aaKnown RBP9.46□□□□□ -0.89
NOLC1-208ENST00000603946 TOP1P11387 765 aaKnown RBP9.46□□□□□ -0.89
NOLC1-208ENST00000603946 FDPSP14324 419 aaKnown RBP9.46□□□□□ -0.89
NOLC1-208ENST00000603946 HEATR3Q7Z4Q2 680 aa9.46□□□□□ -0.89
NOLC1-208ENST00000603946 ANKRD13AQ8IZ07 590 aa9.46□□□□□ -0.89
NOLC1-208ENST00000603946 RPAP3Q9H6T3 665 aaPredicted RBP9.46□□□□□ -0.89
NOLC1-208ENST00000603946 MAD2L2Q9UI95 211 aa9.46□□□□□ -0.89
NOLC1-208ENST00000603946 UBXN2AP68543 259 aa9.46□□□□□ -0.9
NOLC1-208ENST00000603946 GTF3C6Q969F1 213 aa9.46□□□□□ -0.9
NOLC1-208ENST00000603946 CCDC17Q96LX7 622 aa9.46□□□□□ -0.9
NOLC1-208ENST00000603946 SAPCD2Q86UD0 394 aa9.45□□□□□ -0.9
NOLC1-208ENST00000603946 DGKHQ86XP1 1220 aa9.45□□□□□ -0.9
NOLC1-208ENST00000603946 ARHGEF10LQ9HCE6 1279 aa9.45□□□□□ -0.9
NOLC1-208ENST00000603946 NAV1Q8NEY1 1877 aa9.45□□□□□ -0.9
NOLC1-208ENST00000603946 MYCP01106 439 aaPredicted RBP9.45□□□□□ -0.9
NOLC1-208ENST00000603946 VCAM1P19320 739 aa9.45□□□□□ -0.9
NOLC1-208ENST00000603946 LARP1BQ659C4 914 aaKnown RBP9.45□□□□□ -0.9
NOLC1-208ENST00000603946 ADGRF4Q8IZF3 695 aa9.45□□□□□ -0.9
NOLC1-208ENST00000603946 NSUN7Q8NE18 718 aaKnown RBP9.45□□□□□ -0.9
NOLC1-208ENST00000603946 AGBL1Q96MI9 1066 aa9.45□□□□□ -0.9
NOLC1-208ENST00000603946 RAVER2Q9HCJ3 691 aaKnown RBP9.45□□□□□ -0.9
NOLC1-208ENST00000603946 LIFRP42702 1097 aa9.44□□□□□ -0.9
NOLC1-208ENST00000603946 BACE1P56817 501 aa9.44□□□□□ -0.9
NOLC1-208ENST00000603946 TYW1BQ6NUM6 668 aa9.44□□□□□ -0.9
NOLC1-208ENST00000603946 FTOQ9C0B1 505 aaKnown RBP eCLIP9.44□□□□□ -0.9
NOLC1-208ENST00000603946 PSME4Q14997 1843 aa9.44□□□□□ -0.9
NOLC1-208ENST00000603946 LAMA4Q16363 1823 aa9.44□□□□□ -0.9
NOLC1-208ENST00000603946 ZMYM6O95789 1325 aa9.44□□□□□ -0.9
NOLC1-208ENST00000603946 ZC3H4Q9UPT8 1303 aaKnown RBP9.44□□□□□ -0.9
NOLC1-208ENST00000603946 FAM205CA6NFA0 338 aa9.44□□□□□ -0.9
NOLC1-208ENST00000603946 BMP3P12645 472 aa9.44□□□□□ -0.9
NOLC1-208ENST00000603946 HOXA13P31271 388 aaPredicted RBP9.44□□□□□ -0.9
NOLC1-208ENST00000603946 SLC30A10Q6XR72 485 aa9.44□□□□□ -0.9
NOLC1-208ENST00000603946 SHISA4Q96DD7 197 aa9.44□□□□□ -0.9
NOLC1-208ENST00000603946 ATG4CQ96DT6 458 aa9.44□□□□□ -0.9
NOLC1-208ENST00000603946 TFIP11Q9UBB9 837 aaKnown RBP9.44□□□□□ -0.9
NOLC1-208ENST00000603946 IGKV6D-41A0A0C4DH26 115 aa9.44□□□□□ -0.9
NOLC1-208ENST00000603946 SORBS3O60504 671 aa9.44□□□□□ -0.9
NOLC1-208ENST00000603946 PFKFB2O60825 505 aa9.44□□□□□ -0.9
NOLC1-208ENST00000603946 NCLP19338 710 aaKnown RBP9.44□□□□□ -0.9
NOLC1-208ENST00000603946 ANKRD1Q15327 319 aa9.44□□□□□ -0.9
NOLC1-208ENST00000603946 SMC1BQ8NDV3 1235 aa9.44□□□□□ -0.9
NOLC1-208ENST00000603946 OXER1Q8TDS5 423 aa9.44□□□□□ -0.9
NOLC1-208ENST00000603946 PTPN18Q99952 460 aa9.44□□□□□ -0.9
NOLC1-208ENST00000603946 AFG3L2Q9Y4W6 797 aa9.44□□□□□ -0.9
NOLC1-208ENST00000603946 PITPNM2Q9BZ72 1349 aa9.43□□□□□ -0.9
NOLC1-208ENST00000603946 TBC1D12O60347 775 aa9.43□□□□□ -0.9
NOLC1-208ENST00000603946 AKAP17AQ02040 695 aaKnown RBP9.43□□□□□ -0.9
NOLC1-208ENST00000603946 NR5A1Q13285 461 aa9.43□□□□□ -0.9
NOLC1-208ENST00000603946 NTRK3Q16288 839 aa9.43□□□□□ -0.9
NOLC1-208ENST00000603946 TRMT1LQ7Z2T5 733 aaKnown RBP9.43□□□□□ -0.9
NOLC1-208ENST00000603946 SGMS1Q86VZ5 419 aa9.43□□□□□ -0.9
NOLC1-208ENST00000603946 METTL16Q86W50 562 aaKnown RBP9.43□□□□□ -0.9
NOLC1-208ENST00000603946 FAM43AQ8N2R8 423 aa9.43□□□□□ -0.9
NOLC1-208ENST00000603946 ALG1Q9BT22 464 aa9.43□□□□□ -0.9
NOLC1-208ENST00000603946 VCPKMTQ9H867 229 aa9.43□□□□□ -0.9
NOLC1-208ENST00000603946 TMX2Q9Y320 296 aa9.43□□□□□ -0.9
NOLC1-208ENST00000603946 RIPK3Q9Y572 518 aa9.43□□□□□ -0.9
NOLC1-208ENST00000603946 SIPA1L1O43166 1804 aa9.43□□□□□ -0.9
NOLC1-208ENST00000603946 CCL15-CCL14A0A0B4J2E2 113 aa9.43□□□□□ -0.9
NOLC1-208ENST00000603946 SYT1P21579 422 aa9.43□□□□□ -0.9
NOLC1-208ENST00000603946 CCL15Q16663 113 aa9.43□□□□□ -0.9
NOLC1-208ENST00000603946 UBE2SQ16763 222 aa9.43□□□□□ -0.9
NOLC1-208ENST00000603946 FCHSD1Q86WN1 690 aa9.43□□□□□ -0.9
NOLC1-208ENST00000603946 TICAM2Q86XR7 235 aa9.43□□□□□ -0.9
NOLC1-208ENST00000603946 P2RX7Q99572 595 aaKnown RBP9.43□□□□□ -0.9
NOLC1-208ENST00000603946 ROBO3Q96MS0 1386 aa9.43□□□□□ -0.9
NOLC1-208ENST00000603946 USP17L15C9J2P7 530 aa9.43□□□□□ -0.9
NOLC1-208ENST00000603946 USP17L13C9JLJ4 530 aa9.43□□□□□ -0.9
NOLC1-208ENST00000603946 USP17L11C9JVI0 530 aa9.43□□□□□ -0.9
NOLC1-208ENST00000603946 USP17L18D6R9N7 530 aa9.43□□□□□ -0.9
NOLC1-208ENST00000603946 USP17L22D6RA61 530 aa9.43□□□□□ -0.9
NOLC1-208ENST00000603946 USP17L17D6RBQ6 530 aa9.43□□□□□ -0.9
NOLC1-208ENST00000603946 USP17L19D6RCP7 530 aa9.43□□□□□ -0.9
NOLC1-208ENST00000603946 USP17L20D6RJB6 530 aa9.43□□□□□ -0.9
NOLC1-208ENST00000603946 H3BQV1 296 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms