RNA–Protein interactions for RNA: ENST00000603837.1

LINC01109-201, Transcript of long intergenic non-protein coding RNA 1109, humanhuman

BASIC

Gene LINC01109, Length 3,081 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01109-201ENST00000603837 ODF2LQ9ULJ1 636 aa5.34□□□□□ -1.55
LINC01109-201ENST00000603837 INO80Q9ULG1 1556 aaPredicted RBP5.34□□□□□ -1.55
LINC01109-201ENST00000603837 PRMT3O60678 531 aa5.34□□□□□ -1.55
LINC01109-201ENST00000603837 FGFR1OPO95684 399 aaKnown RBP5.34□□□□□ -1.55
LINC01109-201ENST00000603837 SCGB1D2O95969 90 aa5.34□□□□□ -1.55
LINC01109-201ENST00000603837 MYL1P05976 194 aa5.34□□□□□ -1.55
LINC01109-201ENST00000603837 FBXO45P0C2W1 286 aa5.34□□□□□ -1.55
LINC01109-201ENST00000603837 RLBP1P12271 317 aa5.34□□□□□ -1.55
LINC01109-201ENST00000603837 PRR20EP86478 221 aa5.34□□□□□ -1.55
LINC01109-201ENST00000603837 PRR20CP86479 221 aa5.34□□□□□ -1.55
LINC01109-201ENST00000603837 PRR20DP86480 221 aa5.34□□□□□ -1.55
LINC01109-201ENST00000603837 PRR20BP86481 221 aa5.34□□□□□ -1.55
LINC01109-201ENST00000603837 PRR20AP86496 221 aa5.34□□□□□ -1.55
LINC01109-201ENST00000603837 PTPN14Q15678 1187 aa5.34□□□□□ -1.55
LINC01109-201ENST00000603837 GRAMD1BQ3KR37 738 aa5.34□□□□□ -1.55
LINC01109-201ENST00000603837 TMEM164Q5U3C3 297 aa5.34□□□□□ -1.55
LINC01109-201ENST00000603837 RBM12BQ8IXT5 1001 aaKnown RBP5.34□□□□□ -1.55
LINC01109-201ENST00000603837 C3orf20Q8ND61 904 aa5.34□□□□□ -1.55
LINC01109-201ENST00000603837 FAM174AQ8TBP5 190 aa5.34□□□□□ -1.55
LINC01109-201ENST00000603837 ADAM32Q8TC27 787 aa5.34□□□□□ -1.55
LINC01109-201ENST00000603837 TEKT1Q969V4 418 aa5.34□□□□□ -1.55
LINC01109-201ENST00000603837 ZBTB10Q96DT7 871 aa5.34□□□□□ -1.55
LINC01109-201ENST00000603837 OCSTAMPQ9BR26 566 aa5.34□□□□□ -1.55
LINC01109-201ENST00000603837 DCAF16Q9NXF7 216 aa5.34□□□□□ -1.55
LINC01109-201ENST00000603837 LMCD1Q9NZU5 365 aa5.34□□□□□ -1.55
LINC01109-201ENST00000603837 LUZP4Q9P127 313 aa5.34□□□□□ -1.55
LINC01109-201ENST00000603837 DIP2CQ9Y2E4 1556 aa5.34□□□□□ -1.55
LINC01109-201ENST00000603837 IFT172Q9UG01 1749 aa5.34□□□□□ -1.55
LINC01109-201ENST00000603837 ABCC1P33527 1531 aa5.34□□□□□ -1.55
LINC01109-201ENST00000603837 CCDC171Q6TFL3 1326 aa5.34□□□□□ -1.55
LINC01109-201ENST00000603837 C3P01024 1663 aa5.34□□□□□ -1.56
LINC01109-201ENST00000603837 TMEM127O75204 238 aa5.34□□□□□ -1.56
LINC01109-201ENST00000603837 RTN2O75298 545 aa5.34□□□□□ -1.56
LINC01109-201ENST00000603837 RHOBTB3O94955 611 aa5.34□□□□□ -1.56
LINC01109-201ENST00000603837 RPN1P04843 607 aaKnown RBP5.34□□□□□ -1.56
LINC01109-201ENST00000603837 CLNS1AP54105 237 aaKnown RBP5.34□□□□□ -1.56
LINC01109-201ENST00000603837 POLR2FP61218 127 aaKnown RBP5.34□□□□□ -1.56
LINC01109-201ENST00000603837 NSUN2Q08J23 767 aaKnown RBP eCLIP5.34□□□□□ -1.56
LINC01109-201ENST00000603837 PDE3AQ14432 1141 aa5.34□□□□□ -1.56
LINC01109-201ENST00000603837 SHROOM1Q2M3G4 852 aaPredicted RBP5.34□□□□□ -1.56
LINC01109-201ENST00000603837 ERFEQ4G0M1 354 aa5.34□□□□□ -1.56
LINC01109-201ENST00000603837 ARHGAP29Q52LW3 1261 aa5.34□□□□□ -1.56
LINC01109-201ENST00000603837 TSHZ3Q63HK5 1081 aa5.34□□□□□ -1.56
LINC01109-201ENST00000603837 CYP4X1Q8N118 509 aa5.34□□□□□ -1.56
LINC01109-201ENST00000603837 PAWRQ96IZ0 340 aaKnown RBP5.34□□□□□ -1.56
LINC01109-201ENST00000603837 IWS1Q96ST2 819 aa5.34□□□□□ -1.56
LINC01109-201ENST00000603837 SLC39A3Q9BRY0 314 aa5.34□□□□□ -1.56
LINC01109-201ENST00000603837 TTC24A2A3L6 582 aaPredicted RBP5.33□□□□□ -1.56
LINC01109-201ENST00000603837 CASTP20810 708 aaKnown RBP5.33□□□□□ -1.56
LINC01109-201ENST00000603837 LIG3P49916 1009 aa5.33□□□□□ -1.56
LINC01109-201ENST00000603837 RAB27AP51159 221 aa5.33□□□□□ -1.56
LINC01109-201ENST00000603837 KIF11P52732 1056 aa5.33□□□□□ -1.56
LINC01109-201ENST00000603837 PRPF4BQ13523 1007 aaKnown RBP5.33□□□□□ -1.56
LINC01109-201ENST00000603837 PKP1Q13835 747 aa5.33□□□□□ -1.56
LINC01109-201ENST00000603837 RABL6Q3YEC7 729 aaPredicted RBP5.33□□□□□ -1.56
LINC01109-201ENST00000603837 CFAP58Q5T655 872 aa5.33□□□□□ -1.56
LINC01109-201ENST00000603837 FBXW10Q5XX13 1052 aa5.33□□□□□ -1.56
LINC01109-201ENST00000603837 IL31Q6EBC2 164 aa5.33□□□□□ -1.56
LINC01109-201ENST00000603837 MAATS1Q7Z4T9 603 aa5.33□□□□□ -1.56
LINC01109-201ENST00000603837 DGKHQ86XP1 1220 aa5.33□□□□□ -1.56
LINC01109-201ENST00000603837 SAMD3Q8N6K7 520 aa5.33□□□□□ -1.56
LINC01109-201ENST00000603837 SMARCC1Q92922 1105 aaPredicted RBP5.33□□□□□ -1.56
LINC01109-201ENST00000603837 C8orf48Q96LL4 319 aa5.33□□□□□ -1.56
LINC01109-201ENST00000603837 PLEKHG4BQ96PX9 1271 aa5.33□□□□□ -1.56
LINC01109-201ENST00000603837 UCN2Q96RP3 112 aa5.33□□□□□ -1.56
LINC01109-201ENST00000603837 CPS1P31327 1500 aa5.33□□□□□ -1.56
LINC01109-201ENST00000603837 VWDEQ8N2E2 1590 aa5.33□□□□□ -1.56
LINC01109-201ENST00000603837 DUOX2Q9NRD8 1548 aa5.33□□□□□ -1.56
LINC01109-201ENST00000603837 SIAH2O43255 324 aa5.33□□□□□ -1.56
LINC01109-201ENST00000603837 DIAPH1O60610 1272 aaKnown RBP5.33□□□□□ -1.56
LINC01109-201ENST00000603837 KRT18P05783 430 aaKnown RBP5.33□□□□□ -1.56
LINC01109-201ENST00000603837 MYL3P08590 195 aa5.33□□□□□ -1.56
LINC01109-201ENST00000603837 CHMLP26374 656 aa5.33□□□□□ -1.56
LINC01109-201ENST00000603837 HSD3B2P26439 372 aa5.33□□□□□ -1.56
LINC01109-201ENST00000603837 TPP2P29144 1249 aaPredicted RBP5.33□□□□□ -1.56
LINC01109-201ENST00000603837 HPDP32754 393 aaPredicted RBP5.33□□□□□ -1.56
LINC01109-201ENST00000603837 MRPL12P52815 198 aaKnown RBP5.33□□□□□ -1.56
LINC01109-201ENST00000603837 LRMPQ12912 555 aa5.33□□□□□ -1.56
LINC01109-201ENST00000603837 NR1H3Q13133 447 aa5.33□□□□□ -1.56
LINC01109-201ENST00000603837 ARID5BQ14865 1188 aa5.33□□□□□ -1.56
LINC01109-201ENST00000603837 PREPLQ4J6C6 727 aaPredicted RBP5.33□□□□□ -1.56
LINC01109-201ENST00000603837 CCBE1Q6UXH8 406 aaPredicted RBP5.33□□□□□ -1.56
LINC01109-201ENST00000603837 LILRB2Q8N423 598 aa5.33□□□□□ -1.56
LINC01109-201ENST00000603837 GIMAP8Q8ND71 665 aaPredicted RBP5.33□□□□□ -1.56
LINC01109-201ENST00000603837 DNAI2Q9GZS0 605 aa5.33□□□□□ -1.56
LINC01109-201ENST00000603837 IQCGQ9H095 443 aaKnown RBP5.33□□□□□ -1.56
LINC01109-201ENST00000603837 SH3GLB2Q9NR46 395 aa5.33□□□□□ -1.56
LINC01109-201ENST00000603837 SEL1LQ9UBV2 794 aa5.33□□□□□ -1.56
LINC01109-201ENST00000603837 A2MP01023 1474 aa5.33□□□□□ -1.56
LINC01109-201ENST00000603837 TMEM238LA0A1B0GVL6 79 aa5.32□□□□□ -1.56
LINC01109-201ENST00000603837 hCG_1642624A0A1W2PR95 340 aa5.32□□□□□ -1.56
LINC01109-201ENST00000603837 AKR1B10O60218 316 aa5.32□□□□□ -1.56
LINC01109-201ENST00000603837 GFRA3O60609 400 aa5.32□□□□□ -1.56
LINC01109-201ENST00000603837 SNX2O60749 519 aa5.32□□□□□ -1.56
LINC01109-201ENST00000603837 BCAR3O75815 825 aa5.32□□□□□ -1.56
LINC01109-201ENST00000603837 SEC31AO94979 1220 aaKnown RBP5.32□□□□□ -1.56
LINC01109-201ENST00000603837 NEK3P51956 506 aa5.32□□□□□ -1.56
LINC01109-201ENST00000603837 BIRC3Q13489 604 aa5.32□□□□□ -1.56
LINC01109-201ENST00000603837 CCDC178Q5BJE1 867 aa5.32□□□□□ -1.56
LINC01109-201ENST00000603837 IQCA1Q86XH1 822 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms