RNA–Protein interactions for RNA: ENST00000602557.5

CSMD1-216, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 11,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-216ENST00000602557 A0A1W2PP64 1363 aa9.56□□□□□ -0.88
CSMD1-216ENST00000602557 CALUO43852 315 aaPredicted RBP9.56□□□□□ -0.88
CSMD1-216ENST00000602557 VAMP4O75379 141 aa9.56□□□□□ -0.88
CSMD1-216ENST00000602557 IL2RBP14784 551 aa9.56□□□□□ -0.88
CSMD1-216ENST00000602557 IRX1P78414 480 aaPredicted RBP9.56□□□□□ -0.88
CSMD1-216ENST00000602557 HSP90AA5PQ58FG0 334 aa9.56□□□□□ -0.88
CSMD1-216ENST00000602557 NOP53Q9NZM5 478 aaKnown RBP9.56□□□□□ -0.88
CSMD1-216ENST00000602557 NFE2L3Q9Y4A8 694 aa9.56□□□□□ -0.88
CSMD1-216ENST00000602557 KRT14P02533 472 aa9.56□□□□□ -0.88
CSMD1-216ENST00000602557 CABLES1Q8TDN4 633 aa9.56□□□□□ -0.88
CSMD1-216ENST00000602557 NELFBQ8WX92 580 aa9.56□□□□□ -0.88
CSMD1-216ENST00000602557 MYL10Q9BUA6 226 aa9.56□□□□□ -0.88
CSMD1-216ENST00000602557 DPH5Q9H2P9 285 aa9.56□□□□□ -0.88
CSMD1-216ENST00000602557 PNOCQ13519 176 aa9.56□□□□□ -0.88
CSMD1-216ENST00000602557 HIBCHQ6NVY1 386 aaPredicted RBP9.56□□□□□ -0.88
CSMD1-216ENST00000602557 HELLSQ9NRZ9 838 aa9.56□□□□□ -0.88
CSMD1-216ENST00000602557 GCC2Q8IWJ2 1684 aa9.56□□□□□ -0.88
CSMD1-216ENST00000602557 EEF1DP29692 281 aaKnown RBP9.56□□□□□ -0.88
CSMD1-216ENST00000602557 GJC2Q5T442 439 aaPredicted RBP9.56□□□□□ -0.88
CSMD1-216ENST00000602557 CCDC105Q8IYK2 499 aa9.56□□□□□ -0.88
CSMD1-216ENST00000602557 DNAJC8O75937 253 aaPredicted RBP9.56□□□□□ -0.88
CSMD1-216ENST00000602557 ANKRD2Q9GZV1 360 aa9.56□□□□□ -0.88
CSMD1-216ENST00000602557 DEXIO95424 95 aa9.56□□□□□ -0.88
CSMD1-216ENST00000602557 GDAP1Q8TB36 358 aa9.56□□□□□ -0.88
CSMD1-216ENST00000602557 UHRF1BP1LA0JNW5 1464 aa9.56□□□□□ -0.88
CSMD1-216ENST00000602557 TTC38Q5R3I4 469 aa9.56□□□□□ -0.88
CSMD1-216ENST00000602557 ARMT1Q9H993 441 aa9.56□□□□□ -0.88
CSMD1-216ENST00000602557 PSMC1P62191 440 aaKnown RBP9.56□□□□□ -0.88
CSMD1-216ENST00000602557 PUM3Q15397 648 aaKnown RBP9.56□□□□□ -0.88
CSMD1-216ENST00000602557 TBC1D1Q86TI0 1168 aaPredicted RBP9.56□□□□□ -0.88
CSMD1-216ENST00000602557 NDUFB9Q9Y6M9 179 aa9.56□□□□□ -0.88
CSMD1-216ENST00000602557 RPS6KA1Q15418 735 aa9.56□□□□□ -0.88
CSMD1-216ENST00000602557 CAPN12Q6ZSI9 719 aa9.56□□□□□ -0.88
CSMD1-216ENST00000602557 ARMCX6Q7L4S7 300 aa9.56□□□□□ -0.88
CSMD1-216ENST00000602557 ST13P4Q8IZP2 240 aaPredicted RBP9.56□□□□□ -0.88
CSMD1-216ENST00000602557 FAM227BQ96M60 508 aa9.56□□□□□ -0.88
CSMD1-216ENST00000602557 SCINQ9Y6U3 715 aa9.56□□□□□ -0.88
CSMD1-216ENST00000602557 PIK3C2GO75747 1445 aa9.55□□□□□ -0.88
CSMD1-216ENST00000602557 POSTNQ15063 836 aa9.55□□□□□ -0.88
CSMD1-216ENST00000602557 OTUD7BQ6GQQ9 843 aa9.55□□□□□ -0.88
CSMD1-216ENST00000602557 RNF34Q969K3 372 aa9.55□□□□□ -0.88
CSMD1-216ENST00000602557 PBRM1Q86U86 1689 aa9.55□□□□□ -0.88
CSMD1-216ENST00000602557 ARHGEF12Q9NZN5 1544 aa9.55□□□□□ -0.88
CSMD1-216ENST00000602557 hCG_1642624A0A1W2PR95 340 aa9.55□□□□□ -0.88
CSMD1-216ENST00000602557 CUTAO60888 179 aa9.55□□□□□ -0.88
CSMD1-216ENST00000602557 PRDM1O75626 825 aa9.55□□□□□ -0.88
CSMD1-216ENST00000602557 ETF1P62495 437 aaKnown RBP9.55□□□□□ -0.88
CSMD1-216ENST00000602557 DYNC1I2Q13409 638 aaKnown RBP9.55□□□□□ -0.88
CSMD1-216ENST00000602557 SLMAPQ14BN4 828 aa9.55□□□□□ -0.88
CSMD1-216ENST00000602557 NBPF10Q6P3W6 841 aaKnown RBP9.55□□□□□ -0.88
CSMD1-216ENST00000602557 CASC4Q6P4E1 433 aa9.55□□□□□ -0.88
CSMD1-216ENST00000602557 RMDN2Q96LZ7 410 aa9.55□□□□□ -0.88
CSMD1-216ENST00000602557 KDM2BQ8NHM5 1336 aa9.55□□□□□ -0.88
CSMD1-216ENST00000602557 H0Y3Z8 333 aa9.55□□□□□ -0.88
CSMD1-216ENST00000602557 GABPAQ06546 454 aa9.55□□□□□ -0.88
CSMD1-216ENST00000602557 PEX26Q7Z412 305 aa9.55□□□□□ -0.88
CSMD1-216ENST00000602557 SCYL3Q8IZE3 742 aa9.55□□□□□ -0.88
CSMD1-216ENST00000602557 CCDC89Q8N998 374 aa9.55□□□□□ -0.88
CSMD1-216ENST00000602557 ATP2A3Q93084 1043 aa9.55□□□□□ -0.88
CSMD1-216ENST00000602557 PARD6BQ9BYG5 372 aa9.55□□□□□ -0.88
CSMD1-216ENST00000602557 IRX4P78413 519 aa9.55□□□□□ -0.88
CSMD1-216ENST00000602557 V9GY48 417 aaPredicted RBP9.55□□□□□ -0.88
CSMD1-216ENST00000602557 GUCY2DQ02846 1103 aa9.55□□□□□ -0.88
CSMD1-216ENST00000602557 C2orf54Q08AI8 447 aa9.55□□□□□ -0.88
CSMD1-216ENST00000602557 MAEAQ7L5Y9 396 aa9.55□□□□□ -0.88
CSMD1-216ENST00000602557 MAP3K21Q5TCX8 1036 aa9.55□□□□□ -0.88
CSMD1-216ENST00000602557 POLKQ9UBT6 870 aa9.55□□□□□ -0.88
CSMD1-216ENST00000602557 CLEC11AQ9Y240 323 aa9.55□□□□□ -0.88
CSMD1-216ENST00000602557 PPP2R5CQ13362 524 aa9.55□□□□□ -0.88
CSMD1-216ENST00000602557 GPAA1O43292 621 aa9.55□□□□□ -0.88
CSMD1-216ENST00000602557 UFL1O94874 794 aa9.55□□□□□ -0.88
CSMD1-216ENST00000602557 CALCRLQ16602 461 aa9.55□□□□□ -0.88
CSMD1-216ENST00000602557 FBXW10Q5XX13 1052 aa9.55□□□□□ -0.88
CSMD1-216ENST00000602557 LLPHQ9BRT6 129 aaKnown RBP9.55□□□□□ -0.88
CSMD1-216ENST00000602557 CTTNBP2NLQ9P2B4 639 aa9.55□□□□□ -0.88
CSMD1-216ENST00000602557 NAA30Q147X3 362 aaPredicted RBP9.55□□□□□ -0.88
CSMD1-216ENST00000602557 HAUS3Q68CZ6 603 aa9.55□□□□□ -0.88
CSMD1-216ENST00000602557 TPTE2Q6XPS3 522 aa9.55□□□□□ -0.88
CSMD1-216ENST00000602557 CCDC117Q8IWD4 279 aaPredicted RBP9.55□□□□□ -0.88
CSMD1-216ENST00000602557 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.55□□□□□ -0.88
CSMD1-216ENST00000602557 ZC3H12CQ9C0D7 883 aaKnown RBP9.55□□□□□ -0.88
CSMD1-216ENST00000602557 MRPL44Q9H9J2 332 aaKnown RBP9.55□□□□□ -0.88
CSMD1-216ENST00000602557 RHBDL2Q9NX52 303 aa9.55□□□□□ -0.88
CSMD1-216ENST00000602557 USTQ9Y2C2 406 aa9.55□□□□□ -0.88
CSMD1-216ENST00000602557 NR1I2O75469 434 aa9.54□□□□□ -0.88
CSMD1-216ENST00000602557 LZTS1Q9Y250 596 aa9.54□□□□□ -0.88
CSMD1-216ENST00000602557 DDX39AO00148 427 aaKnown RBP9.54□□□□□ -0.88
CSMD1-216ENST00000602557 SKIP12755 728 aa9.54□□□□□ -0.88
CSMD1-216ENST00000602557 NNTQ13423 1086 aa9.54□□□□□ -0.88
CSMD1-216ENST00000602557 TXLNGQ9NUQ3 528 aa9.54□□□□□ -0.88
CSMD1-216ENST00000602557 GINS2Q9Y248 185 aa9.54□□□□□ -0.88
CSMD1-216ENST00000602557 KRIT1O00522 736 aa9.54□□□□□ -0.88
CSMD1-216ENST00000602557 SLC8A3P57103 927 aa9.54□□□□□ -0.88
CSMD1-216ENST00000602557 TNNI3KQ59H18 835 aa9.54□□□□□ -0.88
CSMD1-216ENST00000602557 NXNQ6DKJ4 435 aa9.54□□□□□ -0.88
CSMD1-216ENST00000602557 FPGT-TNNI3KV9GXZ4 949 aa9.54□□□□□ -0.88
CSMD1-216ENST00000602557 CHUKO15111 745 aa9.54□□□□□ -0.88
CSMD1-216ENST00000602557 GNPATO15228 680 aa9.54□□□□□ -0.88
CSMD1-216ENST00000602557 NCAPH2Q6IBW4 605 aa9.54□□□□□ -0.88
CSMD1-216ENST00000602557 ZNF513Q8N8E2 541 aaPredicted RBP9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms