RNA–Protein interactions for RNA: ENST00000602113.5

DDX49-213, Transcript of DEAD-box helicase 49, humanhuman

TSL 1 (best)

Gene DDX49, Length 1,691 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49-213ENST00000602113 SPZ1Q9BXG8 430 aa20.26■□□□□ 0.83
DDX49-213ENST00000602113 DOCK1Q14185 1865 aa20.26■□□□□ 0.83
DDX49-213ENST00000602113 PDIA4P13667 645 aaKnown RBP20.26■□□□□ 0.83
DDX49-213ENST00000602113 GUCY1B3Q02153 619 aa20.26■□□□□ 0.83
DDX49-213ENST00000602113 CCDC96Q2M329 555 aa20.26■□□□□ 0.83
DDX49-213ENST00000602113 NOL9Q5SY16 702 aaKnown RBP20.26■□□□□ 0.83
DDX49-213ENST00000602113 TTBK2Q6IQ55 1244 aa20.26■□□□□ 0.83
DDX49-213ENST00000602113 KCTD1Q719H9 257 aa20.26■□□□□ 0.83
DDX49-213ENST00000602113 GMCL1Q96IK5 515 aa20.26■□□□□ 0.83
DDX49-213ENST00000602113 C8orf76Q96K31 380 aa20.26■□□□□ 0.83
DDX49-213ENST00000602113 NUP88Q99567 741 aaPredicted RBP20.26■□□□□ 0.83
DDX49-213ENST00000602113 UBA5Q9GZZ9 404 aa20.26■□□□□ 0.83
DDX49-213ENST00000602113 H3BQV1 296 aa20.25■□□□□ 0.83
DDX49-213ENST00000602113 PTPRAP18433 802 aa20.25■□□□□ 0.83
DDX49-213ENST00000602113 SMARCA1P28370 1054 aa20.25■□□□□ 0.83
DDX49-213ENST00000602113 SLC1A4P43007 532 aa20.25■□□□□ 0.83
DDX49-213ENST00000602113 AKAP17AQ02040 695 aaKnown RBP20.25■□□□□ 0.83
DDX49-213ENST00000602113 GPATCH4Q5T3I0 446 aaKnown RBP20.25■□□□□ 0.83
DDX49-213ENST00000602113 IFFO2Q5TF58 517 aa20.25■□□□□ 0.83
DDX49-213ENST00000602113 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.25■□□□□ 0.83
DDX49-213ENST00000602113 FBXO18Q8NFZ0 1043 aa20.25■□□□□ 0.83
DDX49-213ENST00000602113 PIBF1Q8WXW3 757 aa20.25■□□□□ 0.83
DDX49-213ENST00000602113 WASF1Q92558 559 aa20.25■□□□□ 0.83
DDX49-213ENST00000602113 PICK1Q9NRD5 415 aa20.25■□□□□ 0.83
DDX49-213ENST00000602113 TRAF5O00463 557 aa20.24■□□□□ 0.83
DDX49-213ENST00000602113 PPP1R12BO60237 982 aaPredicted RBP20.24■□□□□ 0.83
DDX49-213ENST00000602113 MAP3K9P80192 1104 aa20.24■□□□□ 0.83
DDX49-213ENST00000602113 LDHDQ86WU2 507 aa20.24■□□□□ 0.83
DDX49-213ENST00000602113 SPICE1Q8N0Z3 855 aa20.24■□□□□ 0.83
DDX49-213ENST00000602113 SH2D4AQ9H788 454 aa20.24■□□□□ 0.83
DDX49-213ENST00000602113 VCPKMTQ9H867 229 aa20.24■□□□□ 0.83
DDX49-213ENST00000602113 GOPCQ9HD26 462 aa20.24■□□□□ 0.83
DDX49-213ENST00000602113 PAPPA2Q9BXP8 1791 aa20.24■□□□□ 0.83
DDX49-213ENST00000602113 F13A1P00488 732 aa20.23■□□□□ 0.83
DDX49-213ENST00000602113 NF2P35240 595 aa20.23■□□□□ 0.83
DDX49-213ENST00000602113 FMR1Q06787 632 aaKnown RBP eCLIP20.23■□□□□ 0.83
DDX49-213ENST00000602113 VGLL4Q14135 290 aa20.23■□□□□ 0.83
DDX49-213ENST00000602113 ZYXQ15942 572 aaKnown RBP20.23■□□□□ 0.83
DDX49-213ENST00000602113 MOB2Q70IA6 237 aa20.23■□□□□ 0.83
DDX49-213ENST00000602113 SHISA4Q96DD7 197 aa20.23■□□□□ 0.83
DDX49-213ENST00000602113 RIOX1Q9H6W3 641 aa20.23■□□□□ 0.83
DDX49-213ENST00000602113 SNCAIPQ9Y6H5 919 aa20.23■□□□□ 0.83
DDX49-213ENST00000602113 SLC16A2P36021 539 aa20.22■□□□□ 0.83
DDX49-213ENST00000602113 PFKFB3Q16875 520 aaPredicted RBP20.22■□□□□ 0.83
DDX49-213ENST00000602113 FERMT3Q86UX7 667 aa20.22■□□□□ 0.83
DDX49-213ENST00000602113 WDR18Q9BV38 432 aa20.22■□□□□ 0.83
DDX49-213ENST00000602113 BAZ2BQ9UIF8 2168 aaKnown RBP20.22■□□□□ 0.83
DDX49-213ENST00000602113 BMP3P12645 472 aa20.22■□□□□ 0.83
DDX49-213ENST00000602113 IREB2P48200 963 aaKnown RBP20.22■□□□□ 0.83
DDX49-213ENST00000602113 KRT40Q6A162 431 aa20.22■□□□□ 0.83
DDX49-213ENST00000602113 CHAMP1Q96JM3 812 aa20.22■□□□□ 0.83
DDX49-213ENST00000602113 FEZ1Q99689 392 aa20.22■□□□□ 0.83
DDX49-213ENST00000602113 KIAA1683Q9H0B3 1180 aa20.22■□□□□ 0.83
DDX49-213ENST00000602113 VAT1LQ9HCJ6 419 aa20.22■□□□□ 0.83
DDX49-213ENST00000602113 ISY1Q9ULR0 285 aaKnown RBP20.22■□□□□ 0.83
DDX49-213ENST00000602113 ZHX2Q9Y6X8 837 aa20.22■□□□□ 0.83
DDX49-213ENST00000602113 SCG2P13521 617 aa20.21■□□□□ 0.83
DDX49-213ENST00000602113 MAP3K11Q16584 847 aa20.21■□□□□ 0.83
DDX49-213ENST00000602113 ADGRF4Q8IZF3 695 aa20.21■□□□□ 0.83
DDX49-213ENST00000602113 RGS22Q8NE09 1264 aa20.21■□□□□ 0.83
DDX49-213ENST00000602113 JMJD4Q9H9V9 463 aa20.21■□□□□ 0.83
DDX49-213ENST00000602113 RBM27Q9P2N5 1060 aaKnown RBP20.21■□□□□ 0.83
DDX49-213ENST00000602113 SPP2Q13103 211 aa20.2■□□□□ 0.82
DDX49-213ENST00000602113 RESTQ13127 1097 aa20.2■□□□□ 0.82
DDX49-213ENST00000602113 DGKZQ13574 1117 aa20.2■□□□□ 0.82
DDX49-213ENST00000602113 ZNF280CQ8ND82 737 aa20.2■□□□□ 0.82
DDX49-213ENST00000602113 RRP36Q96EU6 259 aaKnown RBP20.2■□□□□ 0.82
DDX49-213ENST00000602113 PIGSQ96S52 555 aa20.2■□□□□ 0.82
DDX49-213ENST00000602113 VPS54Q9P1Q0 977 aa20.2■□□□□ 0.82
DDX49-213ENST00000602113 OTOFQ9HC10 1997 aa20.2■□□□□ 0.82
DDX49-213ENST00000602113 USP17L10C9JJH3 530 aa20.19■□□□□ 0.82
DDX49-213ENST00000602113 TMEM232C9JQI7 657 aa20.19■□□□□ 0.82
DDX49-213ENST00000602113 MTMR2Q13614 643 aa20.19■□□□□ 0.82
DDX49-213ENST00000602113 TTLL12Q14166 644 aaPredicted RBP20.19■□□□□ 0.82
DDX49-213ENST00000602113 FAM83BQ5T0W9 1011 aa20.19■□□□□ 0.82
DDX49-213ENST00000602113 CLEC17AQ6ZS10 378 aa20.19■□□□□ 0.82
DDX49-213ENST00000602113 CLMNQ96JQ2 1002 aa20.19■□□□□ 0.82
DDX49-213ENST00000602113 AS3MTQ9HBK9 375 aa20.19■□□□□ 0.82
DDX49-213ENST00000602113 KCNJ14Q9UNX9 436 aa20.19■□□□□ 0.82
DDX49-213ENST00000602113 MYH6P13533 1939 aa20.19■□□□□ 0.82
DDX49-213ENST00000602113 TRIM29Q14134 588 aa20.19■□□□□ 0.82
DDX49-213ENST00000602113 BTNL9Q6UXG8 535 aa20.19■□□□□ 0.82
DDX49-213ENST00000602113 HOMER1Q86YM7 354 aa20.19■□□□□ 0.82
DDX49-213ENST00000602113 PHIPQ8WWQ0 1821 aa20.19■□□□□ 0.82
DDX49-213ENST00000602113 GPKOWQ92917 476 aaPredicted RBP eCLIP20.19■□□□□ 0.82
DDX49-213ENST00000602113 MTMR8Q96EF0 704 aa20.19■□□□□ 0.82
DDX49-213ENST00000602113 EMILIN3Q9NT22 766 aa20.19■□□□□ 0.82
DDX49-213ENST00000602113 CSADQ9Y600 493 aa20.19■□□□□ 0.82
DDX49-213ENST00000602113 TRIM75PA6NK02 468 aa20.18■□□□□ 0.82
DDX49-213ENST00000602113 BAG4O95429 457 aaKnown RBP20.18■□□□□ 0.82
DDX49-213ENST00000602113 BACE1P56817 501 aa20.18■□□□□ 0.82
DDX49-213ENST00000602113 FOXD4L6Q3SYB3 417 aaPredicted RBP20.18■□□□□ 0.82
DDX49-213ENST00000602113 WWC2Q6AWC2 1192 aa20.18■□□□□ 0.82
DDX49-213ENST00000602113 MCTP1Q6DN14 999 aa20.18■□□□□ 0.82
DDX49-213ENST00000602113 FOXD4L3Q6VB84 417 aaPredicted RBP20.18■□□□□ 0.82
DDX49-213ENST00000602113 ANKRD13AQ8IZ07 590 aa20.18■□□□□ 0.82
DDX49-213ENST00000602113 CNKSR2Q8WXI2 1034 aa20.18■□□□□ 0.82
DDX49-213ENST00000602113 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.18■□□□□ 0.82
DDX49-213ENST00000602113 AFG3L2Q9Y4W6 797 aa20.18■□□□□ 0.82
DDX49-213ENST00000602113 MMP1P03956 469 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms