RNA–Protein interactions for RNA: ENST00000601150.5

TRIM28-215, Transcript of tripartite motif containing 28, humanhuman

TSL 3

Gene TRIM28, Length 915 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-215ENST00000601150 U3KPZ7 1027 aaPredicted RBP19.9■□□□□ 0.78
TRIM28-215ENST00000601150 NEDD4P46934 1319 aa19.9■□□□□ 0.78
TRIM28-215ENST00000601150 NOVP48745 357 aa19.89■□□□□ 0.77
TRIM28-215ENST00000601150 SLC9C1Q4G0N8 1177 aa19.89■□□□□ 0.77
TRIM28-215ENST00000601150 SLFN13Q68D06 897 aa19.89■□□□□ 0.77
TRIM28-215ENST00000601150 SAMD1Q6SPF0 538 aaPredicted RBP19.89■□□□□ 0.77
TRIM28-215ENST00000601150 KIAA1211Q6ZU35 1233 aa19.89■□□□□ 0.77
TRIM28-215ENST00000601150 ATG4CQ96DT6 458 aa19.89■□□□□ 0.77
TRIM28-215ENST00000601150 FLT3LGP49771 235 aa19.88■□□□□ 0.77
TRIM28-215ENST00000601150 NBPF11Q86T75 865 aa19.88■□□□□ 0.77
TRIM28-215ENST00000601150 ARMC5Q96C12 935 aa19.88■□□□□ 0.77
TRIM28-215ENST00000601150 PORCNQ9H237 461 aa19.88■□□□□ 0.77
TRIM28-215ENST00000601150 CNNM2Q9H8M5 875 aa19.88■□□□□ 0.77
TRIM28-215ENST00000601150 FBXO28Q9NVF7 368 aa19.88■□□□□ 0.77
TRIM28-215ENST00000601150 PPP1R9AQ9ULJ8 1098 aa19.88■□□□□ 0.77
TRIM28-215ENST00000601150 IRF5Q13568 498 aa19.87■□□□□ 0.77
TRIM28-215ENST00000601150 CASC1Q6TDU7 716 aa19.87■□□□□ 0.77
TRIM28-215ENST00000601150 MAP4K1Q92918 833 aa19.87■□□□□ 0.77
TRIM28-215ENST00000601150 GMCL1Q96IK5 515 aa19.87■□□□□ 0.77
TRIM28-215ENST00000601150 SLF1Q9BQI6 1058 aa19.87■□□□□ 0.77
TRIM28-215ENST00000601150 KRT23Q9C075 422 aa19.87■□□□□ 0.77
TRIM28-215ENST00000601150 CWC22Q9HCG8 908 aaKnown RBP19.87■□□□□ 0.77
TRIM28-215ENST00000601150 B4E1Z4 1266 aa19.86■□□□□ 0.77
TRIM28-215ENST00000601150 KDM4AO75164 1064 aa19.86■□□□□ 0.77
TRIM28-215ENST00000601150 CDC45O75419 566 aa19.86■□□□□ 0.77
TRIM28-215ENST00000601150 TOP1P11387 765 aaKnown RBP19.86■□□□□ 0.77
TRIM28-215ENST00000601150 BMP3P12645 472 aa19.86■□□□□ 0.77
TRIM28-215ENST00000601150 NKX2-3Q8TAU0 364 aa19.86■□□□□ 0.77
TRIM28-215ENST00000601150 TTC14Q96N46 770 aa19.86■□□□□ 0.77
TRIM28-215ENST00000601150 ADAMTS5Q9UNA0 930 aa19.86■□□□□ 0.77
TRIM28-215ENST00000601150 RBBP6Q7Z6E9 1792 aaKnown RBP19.85■□□□□ 0.77
TRIM28-215ENST00000601150 CYP21A2P08686 494 aa19.85■□□□□ 0.77
TRIM28-215ENST00000601150 GRK4P32298 578 aa19.85■□□□□ 0.77
TRIM28-215ENST00000601150 CCDC178Q5BJE1 867 aa19.85■□□□□ 0.77
TRIM28-215ENST00000601150 GPR142Q7Z601 462 aa19.85■□□□□ 0.77
TRIM28-215ENST00000601150 PLEKHH3Q7Z736 793 aa19.85■□□□□ 0.77
TRIM28-215ENST00000601150 IQCA1Q86XH1 822 aa19.85■□□□□ 0.77
TRIM28-215ENST00000601150 PRPF38AQ8NAV1 312 aaKnown RBP19.85■□□□□ 0.77
TRIM28-215ENST00000601150 SLAIN1Q8ND83 568 aa19.85■□□□□ 0.77
TRIM28-215ENST00000601150 SH3TC2Q8TF17 1288 aa19.85■□□□□ 0.77
TRIM28-215ENST00000601150 TMEM47Q9BQJ4 181 aa19.85■□□□□ 0.77
TRIM28-215ENST00000601150 SPATC1LQ9H0A9 340 aa19.85■□□□□ 0.77
TRIM28-215ENST00000601150 FEM1BQ9UK73 627 aa19.85■□□□□ 0.77
TRIM28-215ENST00000601150 GJD2Q9UKL4 321 aa19.85■□□□□ 0.77
TRIM28-215ENST00000601150 RBM8AQ9Y5S9 174 aaKnown RBP19.85■□□□□ 0.77
TRIM28-215ENST00000601150 VWA5AO00534 786 aa19.84■□□□□ 0.77
TRIM28-215ENST00000601150 ADCY3O60266 1144 aa19.84■□□□□ 0.77
TRIM28-215ENST00000601150 MCCP23508 829 aa19.84■□□□□ 0.77
TRIM28-215ENST00000601150 SLC1A4P43007 532 aa19.84■□□□□ 0.77
TRIM28-215ENST00000601150 PLS1Q14651 629 aa19.84■□□□□ 0.77
TRIM28-215ENST00000601150 TMEM132BQ14DG7 1078 aa19.84■□□□□ 0.77
TRIM28-215ENST00000601150 RCSD1Q6JBY9 416 aa19.84■□□□□ 0.77
TRIM28-215ENST00000601150 SHCBP1Q8NEM2 672 aa19.84■□□□□ 0.77
TRIM28-215ENST00000601150 SOCS4Q8WXH5 440 aa19.84■□□□□ 0.77
TRIM28-215ENST00000601150 ZNF333Q96JL9 665 aa19.84■□□□□ 0.77
TRIM28-215ENST00000601150 NUDT12Q9BQG2 462 aa19.84■□□□□ 0.77
TRIM28-215ENST00000601150 ZKSCAN3Q9BRR0 538 aa19.84■□□□□ 0.77
TRIM28-215ENST00000601150 MOV10L1Q9BXT6 1211 aaKnown RBP19.84■□□□□ 0.77
TRIM28-215ENST00000601150 LSG1Q9H089 658 aaKnown RBP19.84■□□□□ 0.77
TRIM28-215ENST00000601150 ZSWIM5Q9P217 1185 aa19.84■□□□□ 0.77
TRIM28-215ENST00000601150 ISY1Q9ULR0 285 aaKnown RBP19.84■□□□□ 0.77
TRIM28-215ENST00000601150 HTTP42858 3142 aa19.83■□□□□ 0.77
TRIM28-215ENST00000601150 TRDNQ13061 729 aa19.83■□□□□ 0.77
TRIM28-215ENST00000601150 WDR78Q5VTH9 848 aa19.83■□□□□ 0.77
TRIM28-215ENST00000601150 DGKHQ86XP1 1220 aa19.83■□□□□ 0.77
TRIM28-215ENST00000601150 PXYLP1Q8TE99 480 aa19.83■□□□□ 0.77
TRIM28-215ENST00000601150 DCAF4Q8WV16 495 aa19.83■□□□□ 0.77
TRIM28-215ENST00000601150 ANO2Q9NQ90 1003 aa19.83■□□□□ 0.77
TRIM28-215ENST00000601150 ZNF236Q9UL36 1845 aa19.83■□□□□ 0.76
TRIM28-215ENST00000601150 TMEM232C9JQI7 657 aa19.82■□□□□ 0.76
TRIM28-215ENST00000601150 STAT2P52630 851 aa19.82■□□□□ 0.76
TRIM28-215ENST00000601150 FAM160B2Q86V87 743 aa19.82■□□□□ 0.76
TRIM28-215ENST00000601150 REPS2Q8NFH8 660 aa19.82■□□□□ 0.76
TRIM28-215ENST00000601150 CHURC1Q8WUH1 139 aa19.82■□□□□ 0.76
TRIM28-215ENST00000601150 KIFC2Q96AC6 838 aa19.82■□□□□ 0.76
TRIM28-215ENST00000601150 CHMP4CQ96CF2 233 aa19.82■□□□□ 0.76
TRIM28-215ENST00000601150 ZSCAN10Q96SZ4 725 aaPredicted RBP19.82■□□□□ 0.76
TRIM28-215ENST00000601150 MTMR7Q9Y216 660 aa19.82■□□□□ 0.76
TRIM28-215ENST00000601150 IVNS1ABPQ9Y6Y0 642 aa19.82■□□□□ 0.76
TRIM28-215ENST00000601150 ZNFX1Q9P2E3 1918 aaKnown RBP19.82■□□□□ 0.76
TRIM28-215ENST00000601150 PLA2G6O60733 806 aa19.81■□□□□ 0.76
TRIM28-215ENST00000601150 ZBED4O75132 1171 aa19.81■□□□□ 0.76
TRIM28-215ENST00000601150 SLC25A27O95847 323 aa19.81■□□□□ 0.76
TRIM28-215ENST00000601150 ELNP15502 786 aa19.81■□□□□ 0.76
TRIM28-215ENST00000601150 ERCC3P19447 782 aa19.81■□□□□ 0.76
TRIM28-215ENST00000601150 PTPREP23469 700 aa19.81■□□□□ 0.76
TRIM28-215ENST00000601150 SOX10P56693 466 aa19.81■□□□□ 0.76
TRIM28-215ENST00000601150 IKQ13123 557 aaPredicted RBP19.81■□□□□ 0.76
TRIM28-215ENST00000601150 MORN1Q5T089 497 aa19.81■□□□□ 0.76
TRIM28-215ENST00000601150 UBAC1Q9BSL1 405 aa19.81■□□□□ 0.76
TRIM28-215ENST00000601150 MROH8Q9H579 483 aa19.81■□□□□ 0.76
TRIM28-215ENST00000601150 BIN2Q9UBW5 565 aaPredicted RBP19.81■□□□□ 0.76
TRIM28-215ENST00000601150 ZNF214Q9UL59 606 aaPredicted RBP19.81■□□□□ 0.76
TRIM28-215ENST00000601150 CTDP1Q9Y5B0 961 aaPredicted RBP19.81■□□□□ 0.76
TRIM28-215ENST00000601150 SLC15A5A6NIM6 579 aa19.8■□□□□ 0.76
TRIM28-215ENST00000601150 E7EWF7 191 aa19.8■□□□□ 0.76
TRIM28-215ENST00000601150 FDX1P10109 184 aa19.8■□□□□ 0.76
TRIM28-215ENST00000601150 XRCC5P13010 732 aaKnown RBP19.8■□□□□ 0.76
TRIM28-215ENST00000601150 CYP2B6P20813 491 aa19.8■□□□□ 0.76
TRIM28-215ENST00000601150 COPB2P35606 906 aa19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms