RNA–Protein interactions for RNA: ENST00000600628.2

SSBP4-208, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-208ENST00000600628 TNPO2O14787 897 aaKnown RBP10.42□□□□□ -0.74
SSBP4-208ENST00000600628 NMT2O60551 498 aa10.42□□□□□ -0.74
SSBP4-208ENST00000600628 MAPK4P31152 587 aa10.42□□□□□ -0.74
SSBP4-208ENST00000600628 PTH1RQ03431 593 aa10.42□□□□□ -0.74
SSBP4-208ENST00000600628 MAP3K21Q5TCX8 1036 aa10.42□□□□□ -0.74
SSBP4-208ENST00000600628 SKAP1Q86WV1 359 aa10.42□□□□□ -0.74
SSBP4-208ENST00000600628 SPICE1Q8N0Z3 855 aa10.42□□□□□ -0.74
SSBP4-208ENST00000600628 SLAIN1Q8ND83 568 aa10.42□□□□□ -0.74
SSBP4-208ENST00000600628 SHCBP1Q8NEM2 672 aa10.42□□□□□ -0.74
SSBP4-208ENST00000600628 SH3TC2Q8TF17 1288 aa10.42□□□□□ -0.74
SSBP4-208ENST00000600628 ANKS1AQ92625 1134 aa10.42□□□□□ -0.74
SSBP4-208ENST00000600628 MAP4K1Q92918 833 aa10.42□□□□□ -0.74
SSBP4-208ENST00000600628 GMCL1Q96IK5 515 aa10.42□□□□□ -0.74
SSBP4-208ENST00000600628 FBXO28Q9NVF7 368 aa10.42□□□□□ -0.74
SSBP4-208ENST00000600628 CLIP2Q9UDT6 1046 aa10.42□□□□□ -0.74
SSBP4-208ENST00000600628 ZNF214Q9UL59 606 aaPredicted RBP10.42□□□□□ -0.74
SSBP4-208ENST00000600628 PPP1R9AQ9ULJ8 1098 aa10.42□□□□□ -0.74
SSBP4-208ENST00000600628 VWA5AO00534 786 aa10.41□□□□□ -0.74
SSBP4-208ENST00000600628 TSPY3P0CV98 308 aa10.41□□□□□ -0.74
SSBP4-208ENST00000600628 TSPY8P0CW00 308 aa10.41□□□□□ -0.74
SSBP4-208ENST00000600628 SNHG28P0DPA3 235 aa10.41□□□□□ -0.74
SSBP4-208ENST00000600628 GRK4P32298 578 aa10.41□□□□□ -0.74
SSBP4-208ENST00000600628 GRB14Q14449 540 aa10.41□□□□□ -0.74
SSBP4-208ENST00000600628 TMEM132BQ14DG7 1078 aa10.41□□□□□ -0.74
SSBP4-208ENST00000600628 PPP4R3BQ5MIZ7 849 aa10.41□□□□□ -0.74
SSBP4-208ENST00000600628 GPR142Q7Z601 462 aa10.41□□□□□ -0.74
SSBP4-208ENST00000600628 STK11IPQ8N1F8 1099 aa10.41□□□□□ -0.74
SSBP4-208ENST00000600628 COA7Q96BR5 231 aa10.41□□□□□ -0.74
SSBP4-208ENST00000600628 ATG4CQ96DT6 458 aa10.41□□□□□ -0.74
SSBP4-208ENST00000600628 TTC14Q96N46 770 aa10.41□□□□□ -0.74
SSBP4-208ENST00000600628 TMEM106CQ9BVX2 250 aa10.41□□□□□ -0.74
SSBP4-208ENST00000600628 MOV10L1Q9BXT6 1211 aaKnown RBP10.41□□□□□ -0.74
SSBP4-208ENST00000600628 SPATC1LQ9H0A9 340 aa10.41□□□□□ -0.74
SSBP4-208ENST00000600628 PLXNA1Q9UIW2 1896 aa10.4□□□□□ -0.74
SSBP4-208ENST00000600628 ADCY3O60266 1144 aa10.4□□□□□ -0.74
SSBP4-208ENST00000600628 FLOT1O75955 427 aa10.4□□□□□ -0.74
SSBP4-208ENST00000600628 EN2P19622 333 aaPredicted RBP10.4□□□□□ -0.74
SSBP4-208ENST00000600628 HAND2P61296 217 aa10.4□□□□□ -0.74
SSBP4-208ENST00000600628 FAM83BQ5T0W9 1011 aa10.4□□□□□ -0.74
SSBP4-208ENST00000600628 BTNL9Q6UXG8 535 aa10.4□□□□□ -0.74
SSBP4-208ENST00000600628 MFSD6Q6ZSS7 791 aa10.4□□□□□ -0.74
SSBP4-208ENST00000600628 UBE2Q1Q7Z7E8 422 aa10.4□□□□□ -0.74
SSBP4-208ENST00000600628 RIOX2Q8IUF8 465 aa10.4□□□□□ -0.74
SSBP4-208ENST00000600628 ABRAQ8N0Z2 381 aa10.4□□□□□ -0.74
SSBP4-208ENST00000600628 PRPF38AQ8NAV1 312 aaKnown RBP10.4□□□□□ -0.74
SSBP4-208ENST00000600628 SOCS4Q8WXH5 440 aa10.4□□□□□ -0.74
SSBP4-208ENST00000600628 NUP88Q99567 741 aaPredicted RBP10.4□□□□□ -0.74
SSBP4-208ENST00000600628 TANGO6Q9C0B7 1094 aa10.4□□□□□ -0.74
SSBP4-208ENST00000600628 RNF41Q9H4P4 317 aaPredicted RBP10.4□□□□□ -0.74
SSBP4-208ENST00000600628 SLC38A10Q9HBR0 1119 aa10.4□□□□□ -0.74
SSBP4-208ENST00000600628 PAK6Q9NQU5 681 aaPredicted RBP10.4□□□□□ -0.74
SSBP4-208ENST00000600628 CTNNA3Q9UI47 895 aa10.4□□□□□ -0.74
SSBP4-208ENST00000600628 LCTP09848 1927 aa10.39□□□□□ -0.75
SSBP4-208ENST00000600628 SLC15A5A6NIM6 579 aa10.39□□□□□ -0.75
SSBP4-208ENST00000600628 TSPY2A6NKD2 308 aa10.39□□□□□ -0.75
SSBP4-208ENST00000600628 ZNF213O14771 459 aa10.39□□□□□ -0.75
SSBP4-208ENST00000600628 STRNO43815 780 aa10.39□□□□□ -0.75
SSBP4-208ENST00000600628 RANBP6O60518 1105 aaKnown RBP10.39□□□□□ -0.75
SSBP4-208ENST00000600628 MYCP01106 439 aaPredicted RBP10.39□□□□□ -0.75
SSBP4-208ENST00000600628 CYP21A2P08686 494 aa10.39□□□□□ -0.75
SSBP4-208ENST00000600628 PTPREP23469 700 aa10.39□□□□□ -0.75
SSBP4-208ENST00000600628 CCNA1P78396 465 aa10.39□□□□□ -0.75
SSBP4-208ENST00000600628 MTFR1Q15390 333 aa10.39□□□□□ -0.75
SSBP4-208ENST00000600628 PLEKHH3Q7Z736 793 aa10.39□□□□□ -0.75
SSBP4-208ENST00000600628 RUFY2Q8WXA3 655 aa10.39□□□□□ -0.75
SSBP4-208ENST00000600628 TMEM47Q9BQJ4 181 aa10.39□□□□□ -0.75
SSBP4-208ENST00000600628 PAGR1Q9BTK6 254 aa10.39□□□□□ -0.75
SSBP4-208ENST00000600628 LSG1Q9H089 658 aaKnown RBP10.39□□□□□ -0.75
SSBP4-208ENST00000600628 FEM1BQ9UK73 627 aa10.39□□□□□ -0.75
SSBP4-208ENST00000600628 TAF6LQ9Y6J9 622 aa10.39□□□□□ -0.75
SSBP4-208ENST00000600628 FRMPD3Q5JV73 1810 aa10.39□□□□□ -0.75
SSBP4-208ENST00000600628 ZNF536O15090 1300 aa10.38□□□□□ -0.75
SSBP4-208ENST00000600628 CEP290O15078 2479 aa10.38□□□□□ -0.75
SSBP4-208ENST00000600628 HMGCRP04035 888 aa10.38□□□□□ -0.75
SSBP4-208ENST00000600628 FDX1P10109 184 aa10.38□□□□□ -0.75
SSBP4-208ENST00000600628 TOP1P11387 765 aaKnown RBP10.38□□□□□ -0.75
SSBP4-208ENST00000600628 BMP3P12645 472 aa10.38□□□□□ -0.75
SSBP4-208ENST00000600628 ELNP15502 786 aa10.38□□□□□ -0.75
SSBP4-208ENST00000600628 ERCC3P19447 782 aa10.38□□□□□ -0.75
SSBP4-208ENST00000600628 OAZ1P54368 228 aa10.38□□□□□ -0.75
SSBP4-208ENST00000600628 UBXN2AP68543 259 aa10.38□□□□□ -0.75
SSBP4-208ENST00000600628 ATP2B2Q01814 1243 aa10.38□□□□□ -0.75
SSBP4-208ENST00000600628 MAP2K5Q13163 448 aa10.38□□□□□ -0.75
SSBP4-208ENST00000600628 SEC23AQ15436 765 aa10.38□□□□□ -0.75
SSBP4-208ENST00000600628 IMMTQ16891 758 aaKnown RBP10.38□□□□□ -0.75
SSBP4-208ENST00000600628 SLFN13Q68D06 897 aa10.38□□□□□ -0.75
SSBP4-208ENST00000600628 RASGRP2Q7LDG7 609 aa10.38□□□□□ -0.75
SSBP4-208ENST00000600628 DGKHQ86XP1 1220 aa10.38□□□□□ -0.75
SSBP4-208ENST00000600628 LRRC47Q8N1G4 583 aaKnown RBP10.38□□□□□ -0.75
SSBP4-208ENST00000600628 TRIB2Q92519 343 aa10.38□□□□□ -0.75
SSBP4-208ENST00000600628 SHISA4Q96DD7 197 aa10.38□□□□□ -0.75
SSBP4-208ENST00000600628 CCDC136Q96JN2 1154 aa10.38□□□□□ -0.75
SSBP4-208ENST00000600628 NUDT12Q9BQG2 462 aa10.38□□□□□ -0.75
SSBP4-208ENST00000600628 SLF1Q9BQI6 1058 aa10.38□□□□□ -0.75
SSBP4-208ENST00000600628 ESYT1Q9BSJ8 1104 aa10.38□□□□□ -0.75
SSBP4-208ENST00000600628 MROH8Q9H579 483 aa10.38□□□□□ -0.75
SSBP4-208ENST00000600628 ZSWIM5Q9P217 1185 aa10.38□□□□□ -0.75
SSBP4-208ENST00000600628 BIN2Q9UBW5 565 aaPredicted RBP10.38□□□□□ -0.75
SSBP4-208ENST00000600628 DNAJC25-GNG10A0A024R161 153 aa10.37□□□□□ -0.75
SSBP4-208ENST00000600628 SLC25A27O95847 323 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms