RNA–Protein interactions for RNA: ENST00000600196.1

TGFB1-204, Transcript of transforming growth factor beta 1, humanhuman

TSL 5

Gene TGFB1, Length 399 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-204ENST00000600196 GRM4Q14833 912 aa14.34□□□□□ -0.11
TGFB1-204ENST00000600196 LBX2Q6XYB7 198 aa14.34□□□□□ -0.11
TGFB1-204ENST00000600196 CHST3Q7LGC8 479 aa14.34□□□□□ -0.11
TGFB1-204ENST00000600196 TEX2Q8IWB9 1127 aa14.34□□□□□ -0.11
TGFB1-204ENST00000600196 FANCBQ8NB91 859 aa14.34□□□□□ -0.11
TGFB1-204ENST00000600196 CTCFLQ8NI51 663 aaPredicted RBP14.34□□□□□ -0.11
TGFB1-204ENST00000600196 MAF1Q9H063 256 aa14.34□□□□□ -0.11
TGFB1-204ENST00000600196 RBM27Q9P2N5 1060 aaKnown RBP14.34□□□□□ -0.11
TGFB1-204ENST00000600196 OTOFQ9HC10 1997 aa14.34□□□□□ -0.11
TGFB1-204ENST00000600196 OSBPP22059 807 aa14.33□□□□□ -0.12
TGFB1-204ENST00000600196 PDIA3P30101 505 aaKnown RBP14.33□□□□□ -0.12
TGFB1-204ENST00000600196 GJA5P36382 358 aa14.33□□□□□ -0.12
TGFB1-204ENST00000600196 AK2P54819 239 aa14.33□□□□□ -0.12
TGFB1-204ENST00000600196 ZNF543Q08ER8 600 aa14.33□□□□□ -0.12
TGFB1-204ENST00000600196 MOGSQ13724 837 aa14.33□□□□□ -0.12
TGFB1-204ENST00000600196 SHROOM1Q2M3G4 852 aaPredicted RBP14.33□□□□□ -0.12
TGFB1-204ENST00000600196 CPLX2Q6PUV4 134 aaKnown RBP14.33□□□□□ -0.12
TGFB1-204ENST00000600196 CATSPERGQ6ZRH7 1159 aa14.33□□□□□ -0.12
TGFB1-204ENST00000600196 FAM177A1Q8N128 213 aaPredicted RBP14.33□□□□□ -0.12
TGFB1-204ENST00000600196 PRPF38AQ8NAV1 312 aaKnown RBP14.33□□□□□ -0.12
TGFB1-204ENST00000600196 CAPNS2Q96L46 248 aa14.33□□□□□ -0.12
TGFB1-204ENST00000600196 PHIPQ8WWQ0 1821 aa14.33□□□□□ -0.12
TGFB1-204ENST00000600196 KLF18A0A0U1RQI7 1052 aa14.32□□□□□ -0.12
TGFB1-204ENST00000600196 PFKFB2O60825 505 aa14.32□□□□□ -0.12
TGFB1-204ENST00000600196 CPA1P15085 419 aa14.32□□□□□ -0.12
TGFB1-204ENST00000600196 VCAM1P19320 739 aa14.32□□□□□ -0.12
TGFB1-204ENST00000600196 HMGCS2P54868 508 aa14.32□□□□□ -0.12
TGFB1-204ENST00000600196 COG2Q14746 738 aa14.32□□□□□ -0.12
TGFB1-204ENST00000600196 MB21D1Q8N884 522 aa14.32□□□□□ -0.12
TGFB1-204ENST00000600196 RGS22Q8NE09 1264 aa14.32□□□□□ -0.12
TGFB1-204ENST00000600196 CFHR5Q9BXR6 569 aa14.32□□□□□ -0.12
TGFB1-204ENST00000600196 ADAMTS5Q9UNA0 930 aa14.32□□□□□ -0.12
TGFB1-204ENST00000600196 WDR33Q9C0J8 1336 aaKnown RBP14.32□□□□□ -0.12
TGFB1-204ENST00000600196 CCL15-CCL14A0A0B4J2E2 113 aa14.31□□□□□ -0.12
TGFB1-204ENST00000600196 CDKL5O76039 1030 aa14.31□□□□□ -0.12
TGFB1-204ENST00000600196 GCLCP48506 637 aaPredicted RBP14.31□□□□□ -0.12
TGFB1-204ENST00000600196 STAT2P52630 851 aa14.31□□□□□ -0.12
TGFB1-204ENST00000600196 OAZ1P54368 228 aa14.31□□□□□ -0.12
TGFB1-204ENST00000600196 CCL15Q16663 113 aa14.31□□□□□ -0.12
TGFB1-204ENST00000600196 GPAT2Q6NUI2 795 aa14.31□□□□□ -0.12
TGFB1-204ENST00000600196 LRRC47Q8N1G4 583 aaKnown RBP14.31□□□□□ -0.12
TGFB1-204ENST00000600196 CNKSR2Q8WXI2 1034 aa14.31□□□□□ -0.12
TGFB1-204ENST00000600196 LLPHQ9BRT6 129 aaKnown RBP14.31□□□□□ -0.12
TGFB1-204ENST00000600196 SPZ1Q9BXG8 430 aa14.31□□□□□ -0.12
TGFB1-204ENST00000600196 LRRC2Q9BYS8 371 aa14.31□□□□□ -0.12
TGFB1-204ENST00000600196 SLKQ9H2G2 1235 aaPredicted RBP14.31□□□□□ -0.12
TGFB1-204ENST00000600196 BRPF3Q9ULD4 1205 aa14.31□□□□□ -0.12
TGFB1-204ENST00000600196 ATP2A1O14983 1001 aa14.3□□□□□ -0.12
TGFB1-204ENST00000600196 METAP2P50579 478 aaKnown RBP eCLIP14.3□□□□□ -0.122e-10■□□□□ 11.3
TGFB1-204ENST00000600196 APOBRQ0VD83 1088 aa14.3□□□□□ -0.12
TGFB1-204ENST00000600196 COL9A3Q14050 684 aaPredicted RBP14.3□□□□□ -0.12
TGFB1-204ENST00000600196 RTN1Q16799 776 aa14.3□□□□□ -0.12
TGFB1-204ENST00000600196 CLEC10AQ8IUN9 316 aa14.3□□□□□ -0.12
TGFB1-204ENST00000600196 BRI3BPQ8WY22 251 aa14.3□□□□□ -0.12
TGFB1-204ENST00000600196 TCEANC2Q96MN5 208 aa14.3□□□□□ -0.12
TGFB1-204ENST00000600196 RIOX1Q9H6W3 641 aa14.3□□□□□ -0.12
TGFB1-204ENST00000600196 MAD2L2Q9UI95 211 aa14.3□□□□□ -0.12
TGFB1-204ENST00000600196 MYH4Q9Y623 1939 aa14.29□□□□□ -0.12
TGFB1-204ENST00000600196 KLRF2D3W0D1 207 aa14.29□□□□□ -0.12
TGFB1-204ENST00000600196 CA12O43570 354 aa14.29□□□□□ -0.12
TGFB1-204ENST00000600196 PDIA4P13667 645 aaKnown RBP14.29□□□□□ -0.12
TGFB1-204ENST00000600196 KIF23Q02241 960 aaPredicted RBP14.29□□□□□ -0.12
TGFB1-204ENST00000600196 NOM1Q5C9Z4 860 aaKnown RBP14.29□□□□□ -0.12
TGFB1-204ENST00000600196 CYP4F22Q6NT55 531 aa14.29□□□□□ -0.12
TGFB1-204ENST00000600196 CCDC84Q86UT8 332 aaPredicted RBP14.29□□□□□ -0.12
TGFB1-204ENST00000600196 IFNL1Q8IU54 200 aa14.29□□□□□ -0.12
TGFB1-204ENST00000600196 NUP133Q8WUM0 1156 aa14.29□□□□□ -0.12
TGFB1-204ENST00000600196 PARK7Q99497 189 aaKnown RBP14.29□□□□□ -0.12
TGFB1-204ENST00000600196 SLF1Q9BQI6 1058 aa14.29□□□□□ -0.12
TGFB1-204ENST00000600196 RPAP3Q9H6T3 665 aaPredicted RBP14.29□□□□□ -0.12
TGFB1-204ENST00000600196 SENP2Q9HC62 589 aa14.29□□□□□ -0.12
TGFB1-204ENST00000600196 GPHNQ9NQX3 736 aaPredicted RBP14.29□□□□□ -0.12
TGFB1-204ENST00000600196 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.29□□□□□ -0.12
TGFB1-204ENST00000600196 PPP1R9AQ9ULJ8 1098 aa14.29□□□□□ -0.12
TGFB1-204ENST00000600196 TPCN1Q9ULQ1 816 aa14.29□□□□□ -0.12
TGFB1-204ENST00000600196 HPS5Q9UPZ3 1129 aa14.29□□□□□ -0.12
TGFB1-204ENST00000600196 GOLGA8AA7E2F4 631 aa14.28□□□□□ -0.12
TGFB1-204ENST00000600196 GOLGA8BA8MQT2 603 aa14.28□□□□□ -0.12
TGFB1-204ENST00000600196 BTBD19C9JJ37 291 aa14.28□□□□□ -0.12
TGFB1-204ENST00000600196 hCG_1984214I3L0E3 225 aa14.28□□□□□ -0.12
TGFB1-204ENST00000600196 PDHXO00330 501 aa14.28□□□□□ -0.12
TGFB1-204ENST00000600196 IFNAR1P17181 557 aa14.28□□□□□ -0.12
TGFB1-204ENST00000600196 DSG3P32926 999 aa14.28□□□□□ -0.12
TGFB1-204ENST00000600196 COPB2P35606 906 aa14.28□□□□□ -0.12
TGFB1-204ENST00000600196 VEGFBP49765 207 aa14.28□□□□□ -0.12
TGFB1-204ENST00000600196 IRX3P78415 501 aaPredicted RBP14.28□□□□□ -0.12
TGFB1-204ENST00000600196 MAP2K1Q02750 393 aaPredicted RBP14.28□□□□□ -0.12
TGFB1-204ENST00000600196 KIAA1755Q5JYT7 1200 aa14.28□□□□□ -0.12
TGFB1-204ENST00000600196 FAM83BQ5T0W9 1011 aa14.28□□□□□ -0.12
TGFB1-204ENST00000600196 GADL1Q6ZQY3 521 aa14.28□□□□□ -0.12
TGFB1-204ENST00000600196 TMTC3Q6ZXV5 915 aa14.28□□□□□ -0.12
TGFB1-204ENST00000600196 SAMD3Q8N6K7 520 aa14.28□□□□□ -0.12
TGFB1-204ENST00000600196 ZNF713Q8N859 430 aaPredicted RBP14.28□□□□□ -0.12
TGFB1-204ENST00000600196 MTMR8Q96EF0 704 aa14.28□□□□□ -0.12
TGFB1-204ENST00000600196 INTS4Q96HW7 963 aaKnown RBP14.28□□□□□ -0.12
TGFB1-204ENST00000600196 SAGE1Q9NXZ1 904 aa14.28□□□□□ -0.12
TGFB1-204ENST00000600196 LOC285556D6RIA3 1793 aa14.27□□□□□ -0.12
TGFB1-204ENST00000600196 TMEM232C9JQI7 657 aa14.27□□□□□ -0.13
TGFB1-204ENST00000600196 CPLX1O14810 134 aa14.27□□□□□ -0.13
TGFB1-204ENST00000600196 ZBED4O75132 1171 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms