RNA–Protein interactions for RNA: ENST00000599846.5

ARHGEF1-219, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene ARHGEF1, Length 3,393 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-219ENST00000599846 ZRANB2O95218 330 aaKnown RBP eCLIP17.84■□□□□ 0.452e-6■■■□□ 15.3
ARHGEF1-219ENST00000599846 RPN1P04843 607 aaKnown RBP17.84■□□□□ 0.45
ARHGEF1-219ENST00000599846 TRIM21P19474 475 aaKnown RBP17.84■□□□□ 0.45
ARHGEF1-219ENST00000599846 ITPK1Q13572 414 aa17.84■□□□□ 0.45
ARHGEF1-219ENST00000599846 STIM1Q13586 685 aa17.84■□□□□ 0.45
ARHGEF1-219ENST00000599846 INF2Q27J81 1249 aa17.84■□□□□ 0.45
ARHGEF1-219ENST00000599846 CCDC178Q5BJE1 867 aa17.84■□□□□ 0.45
ARHGEF1-219ENST00000599846 TMTC1Q8IUR5 882 aa17.84■□□□□ 0.45
ARHGEF1-219ENST00000599846 FAM84BQ96KN1 310 aaPredicted RBP17.84■□□□□ 0.45
ARHGEF1-219ENST00000599846 NAPGQ99747 312 aaPredicted RBP17.84■□□□□ 0.45
ARHGEF1-219ENST00000599846 RIOK1Q9BRS2 568 aaKnown RBP17.84■□□□□ 0.45
ARHGEF1-219ENST00000599846 NAA15Q9BXJ9 866 aaKnown RBP17.84■□□□□ 0.45
ARHGEF1-219ENST00000599846 TAF3Q5VWG9 929 aa17.84■□□□□ 0.45
ARHGEF1-219ENST00000599846 DYNLL2Q96FJ2 89 aa17.84■□□□□ 0.45
ARHGEF1-219ENST00000599846 CHP1Q99653 195 aa17.84■□□□□ 0.45
ARHGEF1-219ENST00000599846 MINPP1Q9UNW1 487 aa17.84■□□□□ 0.45
ARHGEF1-219ENST00000599846 LUC7L2Q9Y383 392 aaKnown RBP17.84■□□□□ 0.45
ARHGEF1-219ENST00000599846 MYO5AQ9Y4I1 1855 aaKnown RBP17.84■□□□□ 0.45
ARHGEF1-219ENST00000599846 XDHP47989 1333 aa17.84■□□□□ 0.45
ARHGEF1-219ENST00000599846 HIBADHP31937 336 aaKnown RBP17.83■□□□□ 0.45
ARHGEF1-219ENST00000599846 SPAG1Q07617 926 aa17.83■□□□□ 0.45
ARHGEF1-219ENST00000599846 NCAPH2Q6IBW4 605 aa17.83■□□□□ 0.45
ARHGEF1-219ENST00000599846 CYP26C1Q6V0L0 522 aa17.83■□□□□ 0.45
ARHGEF1-219ENST00000599846 TRIM10Q9UDY6 481 aa17.83■□□□□ 0.45
ARHGEF1-219ENST00000599846 NTSR2O95665 410 aa17.83■□□□□ 0.45
ARHGEF1-219ENST00000599846 PRCPP42785 496 aa17.83■□□□□ 0.45
ARHGEF1-219ENST00000599846 AK7Q96M32 723 aa17.83■□□□□ 0.45
ARHGEF1-219ENST00000599846 PDE11AQ9HCR9 933 aa17.83■□□□□ 0.45
ARHGEF1-219ENST00000599846 RMND1Q9NWS8 449 aa17.83■□□□□ 0.45
ARHGEF1-219ENST00000599846 ANKIB1Q9P2G1 1089 aa17.83■□□□□ 0.45
ARHGEF1-219ENST00000599846 TTF2Q9UNY4 1162 aaKnown RBP17.83■□□□□ 0.45
ARHGEF1-219ENST00000599846 KCNQ2O43526 872 aa17.83■□□□□ 0.44
ARHGEF1-219ENST00000599846 HNRNPH2P55795 449 aaKnown RBP17.83■□□□□ 0.44
ARHGEF1-219ENST00000599846 AMOTL1Q8IY63 956 aa17.83■□□□□ 0.44
ARHGEF1-219ENST00000599846 BLIDQ8IZY5 108 aa17.83■□□□□ 0.44
ARHGEF1-219ENST00000599846 ZNF444Q8N0Y2 327 aaPredicted RBP17.83■□□□□ 0.44
ARHGEF1-219ENST00000599846 RGS22Q8NE09 1264 aa17.83■□□□□ 0.44
ARHGEF1-219ENST00000599846 SAP30BPQ9UHR5 308 aaKnown RBP17.83■□□□□ 0.44
ARHGEF1-219ENST00000599846 BCL9O00512 1426 aa17.83■□□□□ 0.44
ARHGEF1-219ENST00000599846 LAMB4A4D0S4 1761 aa17.83■□□□□ 0.44
ARHGEF1-219ENST00000599846 ADAMTS3O15072 1205 aa17.82■□□□□ 0.44
ARHGEF1-219ENST00000599846 GTPBP6O43824 516 aaPredicted RBP17.82■□□□□ 0.44
ARHGEF1-219ENST00000599846 ATP2C1P98194 919 aaPredicted RBP17.82■□□□□ 0.44
ARHGEF1-219ENST00000599846 ELOA2Q8IYF1 753 aaPredicted RBP17.82■□□□□ 0.44
ARHGEF1-219ENST00000599846 DCP1AQ9NPI6 582 aaPredicted RBP17.82■□□□□ 0.44
ARHGEF1-219ENST00000599846 TSPY3P0CV98 308 aa17.82■□□□□ 0.44
ARHGEF1-219ENST00000599846 TSPY8P0CW00 308 aa17.82■□□□□ 0.44
ARHGEF1-219ENST00000599846 FAM193AP78312 1265 aa17.82■□□□□ 0.44
ARHGEF1-219ENST00000599846 UBE4AQ14139 1066 aa17.82■□□□□ 0.44
ARHGEF1-219ENST00000599846 CCDC122Q5T0U0 273 aa17.82■□□□□ 0.44
ARHGEF1-219ENST00000599846 STAG2Q8N3U4 1231 aa17.82■□□□□ 0.44
ARHGEF1-219ENST00000599846 DRC1Q96MC2 740 aa17.82■□□□□ 0.44
ARHGEF1-219ENST00000599846 ABHD10Q9NUJ1 306 aa17.82■□□□□ 0.44
ARHGEF1-219ENST00000599846 ZNHIT6Q9NWK9 470 aaKnown RBP17.82■□□□□ 0.44
ARHGEF1-219ENST00000599846 RNF225M0QZC1 329 aaPredicted RBP17.82■□□□□ 0.44
ARHGEF1-219ENST00000599846 LETM2Q2VYF4 491 aa17.82■□□□□ 0.44
ARHGEF1-219ENST00000599846 TCP11X2Q5H9J9 407 aa17.82■□□□□ 0.44
ARHGEF1-219ENST00000599846 NBPF5PQ86XG9 351 aaPredicted RBP17.82■□□□□ 0.44
ARHGEF1-219ENST00000599846 PNMA1Q8ND90 353 aa17.82■□□□□ 0.44
ARHGEF1-219ENST00000599846 MTIF2P46199 727 aaKnown RBP17.81■□□□□ 0.44
ARHGEF1-219ENST00000599846 NLRP3Q96P20 1036 aa17.81■□□□□ 0.44
ARHGEF1-219ENST00000599846 PKD1L3Q7Z443 1732 aa17.81■□□□□ 0.44
ARHGEF1-219ENST00000599846 PLEKHG2Q9H7P9 1386 aa17.81■□□□□ 0.44
ARHGEF1-219ENST00000599846 USP17L3A6NCW0 530 aa17.81■□□□□ 0.44
ARHGEF1-219ENST00000599846 USP17L4A6NCW7 530 aa17.81■□□□□ 0.44
ARHGEF1-219ENST00000599846 DDAH1O94760 285 aa17.81■□□□□ 0.44
ARHGEF1-219ENST00000599846 PARP1P09874 1014 aaKnown RBP17.81■□□□□ 0.44
ARHGEF1-219ENST00000599846 CALML3P27482 149 aa17.81■□□□□ 0.44
ARHGEF1-219ENST00000599846 RPS8P62241 208 aaKnown RBP17.81■□□□□ 0.44
ARHGEF1-219ENST00000599846 ERVK-24P63145 666 aa17.81■□□□□ 0.44
ARHGEF1-219ENST00000599846 USP17L1Q7RTZ2 530 aa17.81■□□□□ 0.44
ARHGEF1-219ENST00000599846 CCDC47Q96A33 483 aaKnown RBP17.81■□□□□ 0.44
ARHGEF1-219ENST00000599846 EPN1Q9Y6I3 576 aaPredicted RBP17.81■□□□□ 0.44
ARHGEF1-219ENST00000599846 AKAP11Q9UKA4 1901 aa17.81■□□□□ 0.44
ARHGEF1-219ENST00000599846 PSMA7O14818 248 aa17.8■□□□□ 0.44
ARHGEF1-219ENST00000599846 SPATA20Q8TB22 786 aa17.8■□□□□ 0.44
ARHGEF1-219ENST00000599846 BRIP1Q9BX63 1249 aa17.8■□□□□ 0.44
ARHGEF1-219ENST00000599846 FUT2Q10981 343 aa17.8■□□□□ 0.44
ARHGEF1-219ENST00000599846 CDKAL1Q5VV42 579 aa17.8■□□□□ 0.44
ARHGEF1-219ENST00000599846 CCDC148Q8NFR7 591 aa17.8■□□□□ 0.44
ARHGEF1-219ENST00000599846 ABCB6Q9NP58 842 aa17.8■□□□□ 0.44
ARHGEF1-219ENST00000599846 HDAC6Q9UBN7 1215 aa17.8■□□□□ 0.44
ARHGEF1-219ENST00000599846 ZNF142P52746 1687 aaPredicted RBP17.8■□□□□ 0.44
ARHGEF1-219ENST00000599846 CNTNAP5Q8WYK1 1306 aa17.8■□□□□ 0.44
ARHGEF1-219ENST00000599846 MACROD2A1Z1Q3 448 aa17.8■□□□□ 0.44
ARHGEF1-219ENST00000599846 CCDC151A5D8V7 595 aa17.8■□□□□ 0.44
ARHGEF1-219ENST00000599846 RAD21O60216 631 aa17.8■□□□□ 0.44
ARHGEF1-219ENST00000599846 ZMYND10O75800 440 aa17.8■□□□□ 0.44
ARHGEF1-219ENST00000599846 EIF3JO75822 258 aaKnown RBP17.8■□□□□ 0.44
ARHGEF1-219ENST00000599846 RCAN1P53805 252 aa17.8■□□□□ 0.44
ARHGEF1-219ENST00000599846 ASIC1P78348 528 aa17.8■□□□□ 0.44
ARHGEF1-219ENST00000599846 ZNF658Q5TYW1 1059 aaPredicted RBP17.8■□□□□ 0.44
ARHGEF1-219ENST00000599846 RSRC2Q7L4I2 434 aaKnown RBP17.8■□□□□ 0.44
ARHGEF1-219ENST00000599846 CSGALNACT2Q8N6G5 542 aa17.8■□□□□ 0.44
ARHGEF1-219ENST00000599846 SLC44A5Q8NCS7 719 aa17.8■□□□□ 0.44
ARHGEF1-219ENST00000599846 MTA3Q9BTC8 594 aa17.8■□□□□ 0.44
ARHGEF1-219ENST00000599846 JADE2Q9NQC1 790 aa17.8■□□□□ 0.44
ARHGEF1-219ENST00000599846 RWDD2AQ9UIY3 292 aa17.8■□□□□ 0.44
ARHGEF1-219ENST00000599846 SRGAP2O75044 1071 aa17.79■□□□□ 0.44
ARHGEF1-219ENST00000599846 CYP2C19P33261 490 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms