RNA–Protein interactions for RNA: ENST00000598020.3

PNKP-211, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-211ENST00000598020 IFIT3O14879 490 aaKnown RBP23.86■■□□□ 1.41
PNKP-211ENST00000598020 BMP3P12645 472 aa23.86■■□□□ 1.41
PNKP-211ENST00000598020 DSG3P32926 999 aa23.86■■□□□ 1.41
PNKP-211ENST00000598020 FAM110CQ1W6H9 321 aa23.86■■□□□ 1.41
PNKP-211ENST00000598020 ADCK5Q3MIX3 580 aa23.86■■□□□ 1.41
PNKP-211ENST00000598020 POTEEQ6S8J3 1075 aa23.86■■□□□ 1.41
PNKP-211ENST00000598020 IGDCC4Q8TDY8 1250 aa23.86■■□□□ 1.41
PNKP-211ENST00000598020 NUP88Q99567 741 aaPredicted RBP23.86■■□□□ 1.41
PNKP-211ENST00000598020 ADAMTS5Q9UNA0 930 aa23.86■■□□□ 1.41
PNKP-211ENST00000598020 ERICH2A1L162 156 aa23.85■■□□□ 1.41
PNKP-211ENST00000598020 PLA2G6O60733 806 aa23.85■■□□□ 1.41
PNKP-211ENST00000598020 FLOT1O75955 427 aa23.85■■□□□ 1.41
PNKP-211ENST00000598020 HMGB1P09429 215 aaKnown RBP23.85■■□□□ 1.41
PNKP-211ENST00000598020 SNHG28P0DPA3 235 aa23.85■■□□□ 1.41
PNKP-211ENST00000598020 MCCP23508 829 aa23.85■■□□□ 1.41
PNKP-211ENST00000598020 SLC1A4P43007 532 aa23.85■■□□□ 1.41
PNKP-211ENST00000598020 IFIT1BQ5T764 474 aaKnown RBP23.85■■□□□ 1.41
PNKP-211ENST00000598020 PNMA1Q8ND90 353 aa23.85■■□□□ 1.41
PNKP-211ENST00000598020 TMEM87BQ96K49 555 aa23.85■■□□□ 1.41
PNKP-211ENST00000598020 KAT14Q9H8E8 782 aa23.85■■□□□ 1.41
PNKP-211ENST00000598020 RBPJLQ9UBG7 517 aa23.85■■□□□ 1.41
PNKP-211ENST00000598020 FEM1BQ9UK73 627 aa23.85■■□□□ 1.41
PNKP-211ENST00000598020 PPP1R9AQ9ULJ8 1098 aa23.85■■□□□ 1.41
PNKP-211ENST00000598020 RABGAP1Q9Y3P9 1069 aa23.85■■□□□ 1.41
PNKP-211ENST00000598020 PRC1O43663 620 aa23.84■■□□□ 1.41
PNKP-211ENST00000598020 EXOSC10Q01780 885 aaKnown RBP23.84■■□□□ 1.41
PNKP-211ENST00000598020 COL9A3Q14050 684 aaPredicted RBP23.84■■□□□ 1.41
PNKP-211ENST00000598020 DHX32Q7L7V1 743 aaKnown RBP23.84■■□□□ 1.41
PNKP-211ENST00000598020 CHST3Q7LGC8 479 aa23.84■■□□□ 1.41
PNKP-211ENST00000598020 ANKRD13CQ8N6S4 541 aa23.84■■□□□ 1.41
PNKP-211ENST00000598020 MB21D1Q8N884 522 aa23.84■■□□□ 1.41
PNKP-211ENST00000598020 ERO1AQ96HE7 468 aa23.84■■□□□ 1.41
PNKP-211ENST00000598020 SEC24BO95487 1268 aa23.83■■□□□ 1.41
PNKP-211ENST00000598020 PDHBP11177 359 aa23.83■■□□□ 1.41
PNKP-211ENST00000598020 LACTBP83111 547 aaPredicted RBP23.83■■□□□ 1.41
PNKP-211ENST00000598020 WTAPQ15007 396 aa23.83■■□□□ 1.41
PNKP-211ENST00000598020 TMEM67Q5HYA8 995 aa23.83■■□□□ 1.41
PNKP-211ENST00000598020 PRPF38AQ8NAV1 312 aaKnown RBP23.83■■□□□ 1.41
PNKP-211ENST00000598020 SLF1Q9BQI6 1058 aa23.83■■□□□ 1.41
PNKP-211ENST00000598020 TXNRD2Q9NNW7 524 aa23.83■■□□□ 1.41
PNKP-211ENST00000598020 FBXO28Q9NVF7 368 aa23.83■■□□□ 1.41
PNKP-211ENST00000598020 A0A0G2JMZ2 1700 aa23.82■■□□□ 1.4
PNKP-211ENST00000598020 PSMA5P28066 241 aa23.82■■□□□ 1.4
PNKP-211ENST00000598020 LIFRP42702 1097 aa23.82■■□□□ 1.4
PNKP-211ENST00000598020 FAM160B2Q86V87 743 aa23.82■■□□□ 1.4
PNKP-211ENST00000598020 TMTC2Q8N394 836 aa23.82■■□□□ 1.4
PNKP-211ENST00000598020 GPRC5AQ8NFJ5 357 aa23.82■■□□□ 1.4
PNKP-211ENST00000598020 CHURC1Q8WUH1 139 aa23.82■■□□□ 1.4
PNKP-211ENST00000598020 SH2B2O14492 632 aaPredicted RBP23.81■■□□□ 1.4
PNKP-211ENST00000598020 CNMDO75829 334 aa23.81■■□□□ 1.4
PNKP-211ENST00000598020 ANAPC15P60006 121 aa23.81■■□□□ 1.4
PNKP-211ENST00000598020 ZNF543Q08ER8 600 aa23.81■■□□□ 1.4
PNKP-211ENST00000598020 BTNL9Q6UXG8 535 aa23.81■■□□□ 1.4
PNKP-211ENST00000598020 ATG4CQ96DT6 458 aa23.81■■□□□ 1.4
PNKP-211ENST00000598020 IL17RAQ96F46 866 aa23.81■■□□□ 1.4
PNKP-211ENST00000598020 JAKMIP1Q96N16 626 aaKnown RBP23.81■■□□□ 1.4
PNKP-211ENST00000598020 LY9Q9HBG7 655 aa23.81■■□□□ 1.4
PNKP-211ENST00000598020 TMEM232C9JQI7 657 aa23.8■■□□□ 1.4
PNKP-211ENST00000598020 VWA5AO00534 786 aa23.8■■□□□ 1.4
PNKP-211ENST00000598020 FDX1P10109 184 aa23.8■■□□□ 1.4
PNKP-211ENST00000598020 STAT2P52630 851 aa23.8■■□□□ 1.4
PNKP-211ENST00000598020 ERVK-9P63128 1117 aa23.8■■□□□ 1.4
PNKP-211ENST00000598020 ERVK-24P63145 666 aa23.8■■□□□ 1.4
PNKP-211ENST00000598020 KIF22Q14807 665 aa23.8■■□□□ 1.4
PNKP-211ENST00000598020 ARHGEF6Q15052 776 aa23.8■■□□□ 1.4
PNKP-211ENST00000598020 KCTD1Q719H9 257 aa23.8■■□□□ 1.4
PNKP-211ENST00000598020 RASGRP2Q7LDG7 609 aa23.8■■□□□ 1.4
PNKP-211ENST00000598020 TM6SF1Q9BZW5 370 aa23.8■■□□□ 1.4
PNKP-211ENST00000598020 SENP2Q9HC62 589 aa23.8■■□□□ 1.4
PNKP-211ENST00000598020 BTBD7Q9P203 1132 aa23.8■■□□□ 1.4
PNKP-211ENST00000598020 Q3C1V9 767 aa23.79■■□□□ 1.4
PNKP-211ENST00000598020 GPATCH4Q5T3I0 446 aaKnown RBP23.79■■□□□ 1.4
PNKP-211ENST00000598020 FBXL16Q8N461 479 aa23.79■■□□□ 1.4
PNKP-211ENST00000598020 CD99L2Q8TCZ2 262 aa23.79■■□□□ 1.4
PNKP-211ENST00000598020 MTMR7Q9Y216 660 aa23.79■■□□□ 1.4
PNKP-211ENST00000598020 GNRH1P01148 92 aa23.78■■□□□ 1.4
PNKP-211ENST00000598020 TROAPQ12815 778 aa23.78■■□□□ 1.4
PNKP-211ENST00000598020 CCDC96Q2M329 555 aa23.78■■□□□ 1.4
PNKP-211ENST00000598020 BLOC1S2Q6QNY1 142 aa23.78■■□□□ 1.4
PNKP-211ENST00000598020 SGMS1Q86VZ5 419 aa23.78■■□□□ 1.4
PNKP-211ENST00000598020 REPS2Q8NFH8 660 aa23.78■■□□□ 1.4
PNKP-211ENST00000598020 PAGR1Q9BTK6 254 aa23.78■■□□□ 1.4
PNKP-211ENST00000598020 ZSWIM6Q9HCJ5 1215 aa23.78■■□□□ 1.4
PNKP-211ENST00000598020 GPHNQ9NQX3 736 aaPredicted RBP23.78■■□□□ 1.4
PNKP-211ENST00000598020 MGAMO43451 1857 aa23.77■■□□□ 1.4
PNKP-211ENST00000598020 ATP2A1O14983 1001 aa23.77■■□□□ 1.4
PNKP-211ENST00000598020 CCNA1P78396 465 aa23.77■■□□□ 1.4
PNKP-211ENST00000598020 CAP1Q01518 475 aa23.77■■□□□ 1.4
PNKP-211ENST00000598020 ASPRV1Q53RT3 343 aa23.77■■□□□ 1.4
PNKP-211ENST00000598020 MAP3K14Q99558 947 aa23.77■■□□□ 1.4
PNKP-211ENST00000598020 SLC38A10Q9HBR0 1119 aa23.77■■□□□ 1.4
PNKP-211ENST00000598020 COL11A1P12107 1806 aaPredicted RBP23.76■■□□□ 1.39
PNKP-211ENST00000598020 PEX10O60683 326 aa23.76■■□□□ 1.39
PNKP-211ENST00000598020 RPS6KB1P23443 525 aa23.76■■□□□ 1.39
PNKP-211ENST00000598020 CTGFP29279 349 aa23.76■■□□□ 1.39
PNKP-211ENST00000598020 PSMC4P43686 418 aa23.76■■□□□ 1.39
PNKP-211ENST00000598020 FCGRTP55899 365 aa23.76■■□□□ 1.39
PNKP-211ENST00000598020 TMEM132BQ14DG7 1078 aa23.76■■□□□ 1.39
PNKP-211ENST00000598020 TTBK2Q6IQ55 1244 aa23.76■■□□□ 1.39
PNKP-211ENST00000598020 CTU1Q7Z7A3 348 aaKnown RBP23.76■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms