RNA–Protein interactions for RNA: ENST00000595240.5

IRF3-210, Transcript of interferon regulatory factor 3, humanhuman

TSL 2

Gene IRF3, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-210ENST00000595240 NDUFB10O96000 172 aa19.06■□□□□ 0.64
IRF3-210ENST00000595240 KLRC3Q07444 240 aa19.06■□□□□ 0.64
IRF3-210ENST00000595240 NMIQ13287 307 aaPredicted RBP19.06■□□□□ 0.64
IRF3-210ENST00000595240 CCL14Q16627 93 aa19.06■□□□□ 0.64
IRF3-210ENST00000595240 FAM83BQ5T0W9 1011 aa19.06■□□□□ 0.64
IRF3-210ENST00000595240 MKL1Q969V6 931 aa19.06■□□□□ 0.64
IRF3-210ENST00000595240 HMX1Q9NP08 348 aaPredicted RBP19.06■□□□□ 0.64
IRF3-210ENST00000595240 CLIP2Q9UDT6 1046 aa19.06■□□□□ 0.64
IRF3-210ENST00000595240 ANAPC4Q9UJX5 808 aa19.06■□□□□ 0.64
IRF3-210ENST00000595240 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.06■□□□□ 0.64
IRF3-210ENST00000595240 IVNS1ABPQ9Y6Y0 642 aa19.06■□□□□ 0.64
IRF3-210ENST00000595240 RAD21O60216 631 aa19.05■□□□□ 0.64
IRF3-210ENST00000595240 TTLL1O95922 423 aa19.05■□□□□ 0.64
IRF3-210ENST00000595240 HOXC6P09630 235 aa19.05■□□□□ 0.64
IRF3-210ENST00000595240 TSPY3P0CV98 308 aa19.05■□□□□ 0.64
IRF3-210ENST00000595240 TSPY8P0CW00 308 aa19.05■□□□□ 0.64
IRF3-210ENST00000595240 PRKAR2AP13861 404 aaKnown RBP19.05■□□□□ 0.64
IRF3-210ENST00000595240 SDSP20132 328 aa19.05■□□□□ 0.64
IRF3-210ENST00000595240 IRX6P78412 446 aaPredicted RBP19.05■□□□□ 0.64
IRF3-210ENST00000595240 TFAP4Q01664 338 aa19.05■□□□□ 0.64
IRF3-210ENST00000595240 TMEM132BQ14DG7 1078 aa19.05■□□□□ 0.64
IRF3-210ENST00000595240 FAM47AQ5JRC9 791 aa19.05■□□□□ 0.64
IRF3-210ENST00000595240 ZNF589Q86UQ0 364 aaPredicted RBP19.05■□□□□ 0.64
IRF3-210ENST00000595240 PPP1R9AQ9ULJ8 1098 aa19.05■□□□□ 0.64
IRF3-210ENST00000595240 VWA5AO00534 786 aa19.04■□□□□ 0.64
IRF3-210ENST00000595240 FARP2O94887 1054 aaPredicted RBP19.04■□□□□ 0.64
IRF3-210ENST00000595240 TFRCP02786 760 aaKnown RBP19.04■□□□□ 0.64
IRF3-210ENST00000595240 ERCC3P19447 782 aa19.04■□□□□ 0.64
IRF3-210ENST00000595240 CTDSPL2Q05D32 466 aa19.04■□□□□ 0.64
IRF3-210ENST00000595240 SAMD1Q6SPF0 538 aaPredicted RBP19.04■□□□□ 0.64
IRF3-210ENST00000595240 NUP88Q99567 741 aaPredicted RBP19.04■□□□□ 0.64
IRF3-210ENST00000595240 MROH8Q9H579 483 aa19.04■□□□□ 0.64
IRF3-210ENST00000595240 CCDC171Q6TFL3 1326 aa19.03■□□□□ 0.64
IRF3-210ENST00000595240 STRNO43815 780 aa19.03■□□□□ 0.64
IRF3-210ENST00000595240 FGAP02671 866 aa19.03■□□□□ 0.64
IRF3-210ENST00000595240 HSPD1P10809 573 aaKnown RBP19.03■□□□□ 0.64
IRF3-210ENST00000595240 CACNB2Q08289 660 aaPredicted RBP19.03■□□□□ 0.64
IRF3-210ENST00000595240 PLS1Q14651 629 aa19.03■□□□□ 0.64
IRF3-210ENST00000595240 GMCL1P1Q8NEA9 526 aa19.03■□□□□ 0.64
IRF3-210ENST00000595240 INCENPQ9NQS7 918 aa19.03■□□□□ 0.64
IRF3-210ENST00000595240 TACC3Q9Y6A5 838 aa19.03■□□□□ 0.64
IRF3-210ENST00000595240 ZMYM6O95789 1325 aa19.02■□□□□ 0.64
IRF3-210ENST00000595240 IGHA2P01877 340 aa19.02■□□□□ 0.64
IRF3-210ENST00000595240 FGRP09769 529 aa19.02■□□□□ 0.64
IRF3-210ENST00000595240 ADORA2AP29274 412 aa19.02■□□□□ 0.64
IRF3-210ENST00000595240 ABRAQ8N0Z2 381 aa19.02■□□□□ 0.64
IRF3-210ENST00000595240 LRRC47Q8N1G4 583 aaKnown RBP19.02■□□□□ 0.64
IRF3-210ENST00000595240 REPS2Q8NFH8 660 aa19.02■□□□□ 0.64
IRF3-210ENST00000595240 SLF1Q9BQI6 1058 aa19.02■□□□□ 0.64
IRF3-210ENST00000595240 FLRT1Q9NZU1 646 aa19.02■□□□□ 0.64
IRF3-210ENST00000595240 ZNF214Q9UL59 606 aaPredicted RBP19.02■□□□□ 0.64
IRF3-210ENST00000595240 ORC4O43929 436 aa19.01■□□□□ 0.63
IRF3-210ENST00000595240 SLC25A27O95847 323 aa19.01■□□□□ 0.63
IRF3-210ENST00000595240 PDE4AP27815 886 aa19.01■□□□□ 0.63
IRF3-210ENST00000595240 NCAPG2Q86XI2 1143 aa19.01■□□□□ 0.63
IRF3-210ENST00000595240 NPLOC4Q8TAT6 608 aa19.01■□□□□ 0.63
IRF3-210ENST00000595240 PARP14Q460N5 1801 aa19■□□□□ 0.63
IRF3-210ENST00000595240 TSPY2A6NKD2 308 aa19■□□□□ 0.63
IRF3-210ENST00000595240 MFAP1P55081 439 aaKnown RBP19■□□□□ 0.63
IRF3-210ENST00000595240 PPP4R3BQ5MIZ7 849 aa19■□□□□ 0.63
IRF3-210ENST00000595240 MFSD14CQ5VZR4 134 aa19■□□□□ 0.63
IRF3-210ENST00000595240 RIOX2Q8IUF8 465 aa19■□□□□ 0.63
IRF3-210ENST00000595240 ANKLE1Q8NAG6 615 aa19■□□□□ 0.63
IRF3-210ENST00000595240 PRPF38AQ8NAV1 312 aaKnown RBP19■□□□□ 0.63
IRF3-210ENST00000595240 IL17RBQ9NRM6 502 aa19■□□□□ 0.63
IRF3-210ENST00000595240 ZNF236Q9UL36 1845 aa19■□□□□ 0.63
IRF3-210ENST00000595240 HIP1O00291 1037 aa18.99■□□□□ 0.63
IRF3-210ENST00000595240 COBLO75128 1261 aa18.99■□□□□ 0.63
IRF3-210ENST00000595240 CCND3P30281 292 aaPredicted RBP18.99■□□□□ 0.63
IRF3-210ENST00000595240 STAT3P40763 770 aa18.99■□□□□ 0.63
IRF3-210ENST00000595240 NOVP48745 357 aa18.99■□□□□ 0.63
IRF3-210ENST00000595240 SLFN13Q68D06 897 aa18.99■□□□□ 0.63
IRF3-210ENST00000595240 DPP9Q86TI2 863 aa18.99■□□□□ 0.63
IRF3-210ENST00000595240 HTATIP2Q9BUP3 242 aa18.99■□□□□ 0.63
IRF3-210ENST00000595240 DIAPH3Q9NSV4 1193 aa18.99■□□□□ 0.63
IRF3-210ENST00000595240 OGDHLQ9ULD0 1010 aa18.99■□□□□ 0.63
IRF3-210ENST00000595240 RANBP6O60518 1105 aaKnown RBP18.98■□□□□ 0.63
IRF3-210ENST00000595240 NMT2O60551 498 aa18.98■□□□□ 0.63
IRF3-210ENST00000595240 FCER1AP12319 257 aa18.98■□□□□ 0.63
IRF3-210ENST00000595240 COPB2P35606 906 aa18.98■□□□□ 0.63
IRF3-210ENST00000595240 OLFML2BQ68BL8 750 aa18.98■□□□□ 0.63
IRF3-210ENST00000595240 LHX8Q68G74 356 aa18.98■□□□□ 0.63
IRF3-210ENST00000595240 CWC27Q6UX04 472 aaKnown RBP18.98■□□□□ 0.63
IRF3-210ENST00000595240 GMCL1Q96IK5 515 aa18.98■□□□□ 0.63
IRF3-210ENST00000595240 TEX13BQ9BXU2 312 aa18.98■□□□□ 0.63
IRF3-210ENST00000595240 NBPF3Q9H094 633 aa18.98■□□□□ 0.63
IRF3-210ENST00000595240 FEM1BQ9UK73 627 aa18.98■□□□□ 0.63
IRF3-210ENST00000595240 BMP3P12645 472 aa18.97■□□□□ 0.63
IRF3-210ENST00000595240 CYP2C19P33261 490 aa18.97■□□□□ 0.63
IRF3-210ENST00000595240 MNX1P50219 401 aaPredicted RBP18.97■□□□□ 0.63
IRF3-210ENST00000595240 DIS3LQ8TF46 1054 aaKnown RBP18.97■□□□□ 0.63
IRF3-210ENST00000595240 KIFC2Q96AC6 838 aa18.97■□□□□ 0.63
IRF3-210ENST00000595240 PAWRQ96IZ0 340 aaKnown RBP18.97■□□□□ 0.63
IRF3-210ENST00000595240 SLC5A4Q9NY91 659 aa18.97■□□□□ 0.63
IRF3-210ENST00000595240 STX8Q9UNK0 236 aa18.97■□□□□ 0.63
IRF3-210ENST00000595240 ATP2A1O14983 1001 aa18.96■□□□□ 0.63
IRF3-210ENST00000595240 PCP11498 1178 aaKnown RBP18.96■□□□□ 0.63
IRF3-210ENST00000595240 GSPT1P15170 499 aaKnown RBP18.96■□□□□ 0.63
IRF3-210ENST00000595240 HAND2P61296 217 aa18.96■□□□□ 0.63
IRF3-210ENST00000595240 NECAB2Q7Z6G3 386 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms