RNA–Protein interactions for RNA: ENST00000594973.5

SHKBP1-205, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-205ENST00000594973 DAGLAQ9Y4D2 1042 aa19.43■□□□□ 0.7
SHKBP1-205ENST00000594973 MYH6P13533 1939 aa19.43■□□□□ 0.7
SHKBP1-205ENST00000594973 DLEC1Q9Y238 1755 aa19.43■□□□□ 0.7
SHKBP1-205ENST00000594973 BECN2A8MW95 431 aa19.43■□□□□ 0.7
SHKBP1-205ENST00000594973 G3V3G9 751 aa19.43■□□□□ 0.7
SHKBP1-205ENST00000594973 PNMA6AP0CW24 399 aaPredicted RBP19.43■□□□□ 0.7
SHKBP1-205ENST00000594973 DCAF8Q5TAQ9 597 aa19.43■□□□□ 0.7
SHKBP1-205ENST00000594973 TEX2Q8IWB9 1127 aa19.43■□□□□ 0.7
SHKBP1-205ENST00000594973 CCAR2Q8N163 923 aaKnown RBP19.43■□□□□ 0.7
SHKBP1-205ENST00000594973 CERS5Q8N5B7 392 aa19.43■□□□□ 0.7
SHKBP1-205ENST00000594973 FAM163AQ96GL9 167 aaPredicted RBP19.43■□□□□ 0.7
SHKBP1-205ENST00000594973 MASTLQ96GX5 879 aa19.43■□□□□ 0.7
SHKBP1-205ENST00000594973 GAKO14976 1311 aa19.42■□□□□ 0.7
SHKBP1-205ENST00000594973 USP27XA6NNY8 438 aa19.42■□□□□ 0.7
SHKBP1-205ENST00000594973 ATP8B1O43520 1251 aa19.42■□□□□ 0.7
SHKBP1-205ENST00000594973 SKILP12757 684 aa19.42■□□□□ 0.7
SHKBP1-205ENST00000594973 CDK8P49336 464 aa19.42■□□□□ 0.7
SHKBP1-205ENST00000594973 DPCR1Q3MIW9 517 aa19.42■□□□□ 0.7
SHKBP1-205ENST00000594973 NOM1Q5C9Z4 860 aaKnown RBP19.42■□□□□ 0.7
SHKBP1-205ENST00000594973 ISM2Q6H9L7 571 aa19.42■□□□□ 0.7
SHKBP1-205ENST00000594973 CEP57L1Q8IYX8 460 aa19.42■□□□□ 0.7
SHKBP1-205ENST00000594973 SCG2P13521 617 aa19.42■□□□□ 0.7
SHKBP1-205ENST00000594973 TNNT3P45378 269 aaPredicted RBP19.42■□□□□ 0.7
SHKBP1-205ENST00000594973 PLA2G4AP47712 749 aa19.42■□□□□ 0.7
SHKBP1-205ENST00000594973 BRMS1Q9HCU9 246 aa19.42■□□□□ 0.7
SHKBP1-205ENST00000594973 ZNF219Q9P2Y4 722 aaPredicted RBP19.42■□□□□ 0.7
SHKBP1-205ENST00000594973 KCNH3Q9ULD8 1083 aa19.42■□□□□ 0.7
SHKBP1-205ENST00000594973 LRRC37AA6NMS7 1700 aa19.42■□□□□ 0.7
SHKBP1-205ENST00000594973 LTBP1Q14766 1721 aa19.42■□□□□ 0.7
SHKBP1-205ENST00000594973 NAV1Q8NEY1 1877 aa19.41■□□□□ 0.7
SHKBP1-205ENST00000594973 CHRM1P11229 460 aaPredicted RBP19.41■□□□□ 0.7
SHKBP1-205ENST00000594973 EYA3Q99504 573 aa19.41■□□□□ 0.7
SHKBP1-205ENST00000594973 ZNF287Q9HBT7 754 aa19.41■□□□□ 0.7
SHKBP1-205ENST00000594973 FBXO2Q9UK22 296 aaPredicted RBP19.41■□□□□ 0.7
SHKBP1-205ENST00000594973 TTF2Q9UNY4 1162 aaKnown RBP19.41■□□□□ 0.7
SHKBP1-205ENST00000594973 SCNN1DP51172 638 aa19.41■□□□□ 0.7
SHKBP1-205ENST00000594973 CLCN6P51797 869 aa19.41■□□□□ 0.7
SHKBP1-205ENST00000594973 LONRF3Q496Y0 759 aa19.41■□□□□ 0.7
SHKBP1-205ENST00000594973 C16orf86Q6ZW13 317 aa19.41■□□□□ 0.7
SHKBP1-205ENST00000594973 DHX40Q8IX18 779 aaKnown RBP19.41■□□□□ 0.7
SHKBP1-205ENST00000594973 AOPEPQ8N6M6 819 aa19.41■□□□□ 0.7
SHKBP1-205ENST00000594973 TMEM47Q9BQJ4 181 aa19.41■□□□□ 0.7
SHKBP1-205ENST00000594973 ZRANB2O95218 330 aaKnown RBP eCLIP19.4■□□□□ 0.7
SHKBP1-205ENST00000594973 NLRP5P59047 1200 aa19.4■□□□□ 0.7
SHKBP1-205ENST00000594973 NPY5RQ15761 445 aa19.4■□□□□ 0.7
SHKBP1-205ENST00000594973 PFKFB3Q16875 520 aaPredicted RBP19.4■□□□□ 0.7
SHKBP1-205ENST00000594973 FILIP1Q7Z7B0 1213 aa19.4■□□□□ 0.7
SHKBP1-205ENST00000594973 NAT10Q9H0A0 1025 aaKnown RBP19.4■□□□□ 0.7
SHKBP1-205ENST00000594973 ARGLU1Q9NWB6 273 aaPredicted RBP19.4■□□□□ 0.7
SHKBP1-205ENST00000594973 CEP131Q9UPN4 1083 aa19.4■□□□□ 0.7
SHKBP1-205ENST00000594973 TRIM75PA6NK02 468 aa19.4■□□□□ 0.7
SHKBP1-205ENST00000594973 PTPREP23469 700 aa19.4■□□□□ 0.7
SHKBP1-205ENST00000594973 CCZ1BP86790 482 aa19.4■□□□□ 0.7
SHKBP1-205ENST00000594973 CCZ1P86791 482 aaPredicted RBP19.4■□□□□ 0.7
SHKBP1-205ENST00000594973 GPS2Q13227 327 aa19.4■□□□□ 0.7
SHKBP1-205ENST00000594973 PNOCQ13519 176 aa19.4■□□□□ 0.7
SHKBP1-205ENST00000594973 PAXIP1Q6ZW49 1069 aaPredicted RBP19.4■□□□□ 0.7
SHKBP1-205ENST00000594973 RASGRP2Q7LDG7 609 aa19.4■□□□□ 0.7
SHKBP1-205ENST00000594973 C2CD5Q86YS7 1000 aa19.4■□□□□ 0.7
SHKBP1-205ENST00000594973 ANKS1AQ92625 1134 aa19.4■□□□□ 0.7
SHKBP1-205ENST00000594973 GPKOWQ92917 476 aaPredicted RBP eCLIP19.4■□□□□ 0.7
SHKBP1-205ENST00000594973 TRERF1Q96PN7 1200 aa19.4■□□□□ 0.7
SHKBP1-205ENST00000594973 MAD2L2Q9UI95 211 aa19.4■□□□□ 0.7
SHKBP1-205ENST00000594973 WNT7AO00755 349 aa19.39■□□□□ 0.69
SHKBP1-205ENST00000594973 GOLGA8HP0CJ92 632 aa19.39■□□□□ 0.69
SHKBP1-205ENST00000594973 CCDC93Q567U6 631 aa19.39■□□□□ 0.69
SHKBP1-205ENST00000594973 CNNM3Q8NE01 707 aa19.39■□□□□ 0.69
SHKBP1-205ENST00000594973 DBNDD1Q9H9R9 158 aa19.39■□□□□ 0.69
SHKBP1-205ENST00000594973 TCP11L1Q9NUJ3 509 aa19.39■□□□□ 0.69
SHKBP1-205ENST00000594973 GEMIN8Q9NWZ8 242 aaKnown RBP19.39■□□□□ 0.69
SHKBP1-205ENST00000594973 FAM237AA0A1B0GTK4 181 aa19.39■□□□□ 0.69
SHKBP1-205ENST00000594973 CCDC178Q5BJE1 867 aa19.39■□□□□ 0.69
SHKBP1-205ENST00000594973 KCNQ5Q9NR82 932 aa19.39■□□□□ 0.69
SHKBP1-205ENST00000594973 ADAMTS3O15072 1205 aa19.38■□□□□ 0.69
SHKBP1-205ENST00000594973 NT5C2P49902 561 aa19.38■□□□□ 0.69
SHKBP1-205ENST00000594973 GRM4Q14833 912 aa19.38■□□□□ 0.69
SHKBP1-205ENST00000594973 CWC15Q9P013 229 aaKnown RBP19.38■□□□□ 0.69
SHKBP1-205ENST00000594973 SRPRBQ9Y5M8 271 aaKnown RBP19.38■□□□□ 0.69
SHKBP1-205ENST00000594973 NOP2P46087 812 aaKnown RBP19.37■□□□□ 0.69
SHKBP1-205ENST00000594973 ZNF174Q15697 407 aa19.37■□□□□ 0.69
SHKBP1-205ENST00000594973 ERCC6LQ2NKX8 1250 aa19.37■□□□□ 0.69
SHKBP1-205ENST00000594973 KRBA2Q6ZNG9 492 aa19.37■□□□□ 0.69
SHKBP1-205ENST00000594973 PIK3AP1Q6ZUJ8 805 aa19.37■□□□□ 0.69
SHKBP1-205ENST00000594973 PDILTQ8N807 584 aa19.37■□□□□ 0.69
SHKBP1-205ENST00000594973 TNFRSF25Q93038 417 aa19.37■□□□□ 0.69
SHKBP1-205ENST00000594973 UBXN6Q9BZV1 441 aa19.37■□□□□ 0.69
SHKBP1-205ENST00000594973 CSRNP2Q9H175 543 aa19.37■□□□□ 0.69
SHKBP1-205ENST00000594973 RSPH14Q9UHP6 348 aa19.37■□□□□ 0.69
SHKBP1-205ENST00000594973 SNED1Q8TER0 1413 aa19.37■□□□□ 0.69
SHKBP1-205ENST00000594973 NRXN2Q9P2S2 1712 aa19.37■□□□□ 0.69
SHKBP1-205ENST00000594973 POLR2DO15514 142 aaKnown RBP19.37■□□□□ 0.69
SHKBP1-205ENST00000594973 GSDMDP57764 484 aa19.37■□□□□ 0.69
SHKBP1-205ENST00000594973 TMCO3Q6UWJ1 677 aa19.37■□□□□ 0.69
SHKBP1-205ENST00000594973 USP49Q70CQ1 688 aa19.37■□□□□ 0.69
SHKBP1-205ENST00000594973 METTL16Q86W50 562 aaKnown RBP19.37■□□□□ 0.69
SHKBP1-205ENST00000594973 CPVLQ9H3G5 476 aa19.37■□□□□ 0.69
SHKBP1-205ENST00000594973 DDX4Q9NQI0 724 aaKnown RBP19.37■□□□□ 0.69
SHKBP1-205ENST00000594973 H0YIN7 160 aa19.36■□□□□ 0.69
SHKBP1-205ENST00000594973 FOXN1O15353 648 aa19.36■□□□□ 0.69
SHKBP1-205ENST00000594973 CHRNA5P30532 468 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms