RNA–Protein interactions for RNA: ENST00000594948.5

VRK3-209, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VRK3, Length 1,847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-209ENST00000594948 ZBTB1Q9Y2K1 713 aa14.95□□□□□ -0.02
VRK3-209ENST00000594948 MAST2Q6P0Q8 1798 aa14.95□□□□□ -0.02
VRK3-209ENST00000594948 ZNF804BA4D1E1 1349 aa14.94□□□□□ -0.02
VRK3-209ENST00000594948 CNTNAP5Q8WYK1 1306 aa14.94□□□□□ -0.02
VRK3-209ENST00000594948 KIAA1551Q9HCM1 1747 aa14.94□□□□□ -0.02
VRK3-209ENST00000594948 MAGEB6P1A0A0J9YX57 407 aa14.94□□□□□ -0.02
VRK3-209ENST00000594948 A0A1W2PQC6 194 aa14.94□□□□□ -0.02
VRK3-209ENST00000594948 H7C1D1 291 aa14.94□□□□□ -0.02
VRK3-209ENST00000594948 CYP7A1P22680 504 aa14.94□□□□□ -0.02
VRK3-209ENST00000594948 PTGDRQ13258 359 aa14.94□□□□□ -0.02
VRK3-209ENST00000594948 IFIT1BQ5T764 474 aaKnown RBP14.94□□□□□ -0.02
VRK3-209ENST00000594948 RPGRIP1Q96KN7 1286 aa14.94□□□□□ -0.02
VRK3-209ENST00000594948 HAUS4Q9H6D7 363 aa14.94□□□□□ -0.02
VRK3-209ENST00000594948 PDE11AQ9HCR9 933 aa14.94□□□□□ -0.02
VRK3-209ENST00000594948 MYO6Q9UM54 1294 aa14.94□□□□□ -0.02
VRK3-209ENST00000594948 A0A0U1RQJ8 604 aa14.94□□□□□ -0.02
VRK3-209ENST00000594948 KCNJ18B7U540 433 aa14.94□□□□□ -0.02
VRK3-209ENST00000594948 PSMD14O00487 310 aa14.94□□□□□ -0.02
VRK3-209ENST00000594948 GTF2E1P29083 439 aaPredicted RBP14.94□□□□□ -0.02
VRK3-209ENST00000594948 TROAPQ12815 778 aa14.94□□□□□ -0.02
VRK3-209ENST00000594948 KCNJ12Q14500 433 aa14.94□□□□□ -0.02
VRK3-209ENST00000594948 IQCA1Q86XH1 822 aa14.94□□□□□ -0.02
VRK3-209ENST00000594948 ATRIPQ8WXE1 791 aa14.94□□□□□ -0.02
VRK3-209ENST00000594948 CDC5LQ99459 802 aaKnown RBP14.94□□□□□ -0.02
VRK3-209ENST00000594948 NUP88Q99567 741 aaPredicted RBP14.94□□□□□ -0.02
VRK3-209ENST00000594948 ZSWIM4Q9H7M6 989 aa14.94□□□□□ -0.02
VRK3-209ENST00000594948 FEZ2Q9UHY8 353 aaPredicted RBP14.94□□□□□ -0.02
VRK3-209ENST00000594948 MYL1P05976 194 aa14.93□□□□□ -0.02
VRK3-209ENST00000594948 KRT9P35527 623 aa14.93□□□□□ -0.02
VRK3-209ENST00000594948 LONP1P36776 959 aaKnown RBP14.93□□□□□ -0.02
VRK3-209ENST00000594948 IGHMBP2P38935 993 aaKnown RBP14.93□□□□□ -0.02
VRK3-209ENST00000594948 LMAN1P49257 510 aa14.93□□□□□ -0.02
VRK3-209ENST00000594948 EVA1CP58658 441 aa14.93□□□□□ -0.02
VRK3-209ENST00000594948 CASP8Q14790 479 aa14.93□□□□□ -0.02
VRK3-209ENST00000594948 ZNF174Q15697 407 aa14.93□□□□□ -0.02
VRK3-209ENST00000594948 CCDC152Q4G0S7 254 aa14.93□□□□□ -0.02
VRK3-209ENST00000594948 PARP10Q53GL7 1025 aa14.93□□□□□ -0.02
VRK3-209ENST00000594948 LEKR1Q6ZMV7 388 aa14.93□□□□□ -0.02
VRK3-209ENST00000594948 SMYD4Q8IYR2 804 aaPredicted RBP14.93□□□□□ -0.02
VRK3-209ENST00000594948 CCDC148Q8NFR7 591 aa14.93□□□□□ -0.02
VRK3-209ENST00000594948 NELFBQ8WX92 580 aa14.93□□□□□ -0.02
VRK3-209ENST00000594948 SLC4A9Q96Q91 983 aa14.93□□□□□ -0.02
VRK3-209ENST00000594948 EPN1Q9Y6I3 576 aaPredicted RBP14.93□□□□□ -0.02
VRK3-209ENST00000594948 V9GY48 417 aaPredicted RBP14.93□□□□□ -0.02
VRK3-209ENST00000594948 MINDY4BA8MYZ0 360 aa14.92□□□□□ -0.02
VRK3-209ENST00000594948 PLEKHA8P1O95397 391 aa14.92□□□□□ -0.02
VRK3-209ENST00000594948 EEF1GP26641 437 aaKnown RBP14.92□□□□□ -0.02
VRK3-209ENST00000594948 CASP1P29466 404 aa14.92□□□□□ -0.02
VRK3-209ENST00000594948 CCT6AP40227 531 aaKnown RBP14.92□□□□□ -0.02
VRK3-209ENST00000594948 AARSP49588 968 aaKnown RBP eCLIP14.92□□□□□ -0.02
VRK3-209ENST00000594948 NT5C2P49902 561 aa14.92□□□□□ -0.02
VRK3-209ENST00000594948 BCAMP50895 628 aa14.92□□□□□ -0.02
VRK3-209ENST00000594948 VSNL1P62760 191 aa14.92□□□□□ -0.02
VRK3-209ENST00000594948 MCM6Q14566 821 aa14.92□□□□□ -0.02
VRK3-209ENST00000594948 KCNB1Q14721 858 aa14.92□□□□□ -0.02
VRK3-209ENST00000594948 TRAPPC11Q7Z392 1133 aa14.92□□□□□ -0.02
VRK3-209ENST00000594948 CTCFLQ8NI51 663 aaPredicted RBP14.92□□□□□ -0.02
VRK3-209ENST00000594948 DNAJC7Q99615 494 aa14.92□□□□□ -0.02
VRK3-209ENST00000594948 RIOK1Q9BRS2 568 aaKnown RBP14.92□□□□□ -0.02
VRK3-209ENST00000594948 VPS18Q9P253 973 aa14.92□□□□□ -0.02
VRK3-209ENST00000594948 DOT1LQ8TEK3 1739 aa14.92□□□□□ -0.02
VRK3-209ENST00000594948 CCDC88AQ3V6T2 1871 aa14.92□□□□□ -0.02
VRK3-209ENST00000594948 TARSL2A2RTX5 802 aaKnown RBP14.92□□□□□ -0.02
VRK3-209ENST00000594948 WNT7AO00755 349 aa14.92□□□□□ -0.02
VRK3-209ENST00000594948 ORC4O43929 436 aa14.92□□□□□ -0.02
VRK3-209ENST00000594948 NDUFA10O95299 355 aa14.92□□□□□ -0.02
VRK3-209ENST00000594948 RPN1P04843 607 aaKnown RBP14.92□□□□□ -0.02
VRK3-209ENST00000594948 MAP9Q49MG5 647 aa14.92□□□□□ -0.02
VRK3-209ENST00000594948 MIGA1Q8NAN2 632 aa14.92□□□□□ -0.02
VRK3-209ENST00000594948 EHBP1Q8NDI1 1231 aa14.92□□□□□ -0.02
VRK3-209ENST00000594948 OR8K1Q8NGG5 319 aa14.92□□□□□ -0.02
VRK3-209ENST00000594948 NOC3LQ8WTT2 800 aaKnown RBP14.92□□□□□ -0.02
VRK3-209ENST00000594948 VPS16Q9H269 839 aa14.92□□□□□ -0.02
VRK3-209ENST00000594948 TAB2Q9NYJ8 693 aa14.92□□□□□ -0.02
VRK3-209ENST00000594948 LGALS16A8MUM7 142 aa14.91□□□□□ -0.02
VRK3-209ENST00000594948 PRDM1O75626 825 aa14.91□□□□□ -0.02
VRK3-209ENST00000594948 CKAP4Q07065 602 aaKnown RBP14.91□□□□□ -0.02
VRK3-209ENST00000594948 HSP90B2PQ58FF3 399 aa14.91□□□□□ -0.02
VRK3-209ENST00000594948 SUSD4Q5VX71 490 aa14.91□□□□□ -0.02
VRK3-209ENST00000594948 PAPD7Q5XG87 772 aaKnown RBP14.91□□□□□ -0.02
VRK3-209ENST00000594948 MTRQ99707 1265 aa14.91□□□□□ -0.02
VRK3-209ENST00000594948 THAP9Q9H5L6 903 aa14.91□□□□□ -0.02
VRK3-209ENST00000594948 GNL3LQ9NVN8 582 aaKnown RBP14.91□□□□□ -0.02
VRK3-209ENST00000594948 MKRN1Q9UHC7 482 aaKnown RBP14.91□□□□□ -0.02
VRK3-209ENST00000594948 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.91□□□□□ -0.02
VRK3-209ENST00000594948 PDS5AQ29RF7 1337 aaKnown RBP14.9□□□□□ -0.02
VRK3-209ENST00000594948 RNF225M0QZC1 329 aaPredicted RBP14.9□□□□□ -0.02
VRK3-209ENST00000594948 PARP1P09874 1014 aaKnown RBP14.9□□□□□ -0.02
VRK3-209ENST00000594948 RHOXF2BP0C7M4 288 aa14.9□□□□□ -0.02
VRK3-209ENST00000594948 SCG2P13521 617 aa14.9□□□□□ -0.02
VRK3-209ENST00000594948 CALML3P27482 149 aa14.9□□□□□ -0.02
VRK3-209ENST00000594948 USP14P54578 494 aa14.9□□□□□ -0.02
VRK3-209ENST00000594948 PFKFB3Q16875 520 aaPredicted RBP14.9□□□□□ -0.02
VRK3-209ENST00000594948 WWC2Q6AWC2 1192 aa14.9□□□□□ -0.02
VRK3-209ENST00000594948 ADGRA1Q86SQ6 560 aa14.9□□□□□ -0.02
VRK3-209ENST00000594948 ADSSL1Q8N142 457 aa14.9□□□□□ -0.02
VRK3-209ENST00000594948 MB21D1Q8N884 522 aa14.9□□□□□ -0.02
VRK3-209ENST00000594948 SLF1Q9BQI6 1058 aa14.9□□□□□ -0.02
VRK3-209ENST00000594948 RHOXF2Q9BQY4 288 aa14.9□□□□□ -0.02
VRK3-209ENST00000594948 SH3GLB2Q9NR46 395 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms