RNA–Protein interactions for RNA: ENST00000594511.1

XRCC1-204, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 4

Gene XRCC1, Length 571 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-204ENST00000594511 AGXT2Q9BYV1 514 aa13.18□□□□□ -0.3
XRCC1-204ENST00000594511 RBPJLQ9UBG7 517 aa13.18□□□□□ -0.3
XRCC1-204ENST00000594511 A0A0G2JMZ2 1700 aa13.17□□□□□ -0.3
XRCC1-204ENST00000594511 SPDYE16A6NNV3 312 aaPredicted RBP13.17□□□□□ -0.3
XRCC1-204ENST00000594511 ATP2B2Q01814 1243 aa13.17□□□□□ -0.3
XRCC1-204ENST00000594511 SGMS1Q86VZ5 419 aa13.17□□□□□ -0.3
XRCC1-204ENST00000594511 SPICE1Q8N0Z3 855 aa13.17□□□□□ -0.3
XRCC1-204ENST00000594511 LRRC47Q8N1G4 583 aaKnown RBP13.17□□□□□ -0.3
XRCC1-204ENST00000594511 TMTC2Q8N394 836 aa13.17□□□□□ -0.3
XRCC1-204ENST00000594511 MAP3K14Q99558 947 aa13.17□□□□□ -0.3
XRCC1-204ENST00000594511 ZKSCAN3Q9BRR0 538 aa13.17□□□□□ -0.3
XRCC1-204ENST00000594511 UBAC1Q9BSL1 405 aa13.17□□□□□ -0.3
XRCC1-204ENST00000594511 LY9Q9HBG7 655 aa13.17□□□□□ -0.3
XRCC1-204ENST00000594511 FEM1BQ9UK73 627 aa13.17□□□□□ -0.3
XRCC1-204ENST00000594511 RABGAP1Q9Y3P9 1069 aa13.17□□□□□ -0.3
XRCC1-204ENST00000594511 SH2B2O14492 632 aaPredicted RBP13.16□□□□□ -0.3
XRCC1-204ENST00000594511 PRC1O43663 620 aa13.16□□□□□ -0.3
XRCC1-204ENST00000594511 CNMDO75829 334 aa13.16□□□□□ -0.3
XRCC1-204ENST00000594511 FDX1P10109 184 aa13.16□□□□□ -0.3
XRCC1-204ENST00000594511 PDHBP11177 359 aa13.16□□□□□ -0.3
XRCC1-204ENST00000594511 BMP3P12645 472 aa13.16□□□□□ -0.3
XRCC1-204ENST00000594511 IRX3P78415 501 aaPredicted RBP13.16□□□□□ -0.3
XRCC1-204ENST00000594511 SP3Q02447 781 aa13.16□□□□□ -0.3
XRCC1-204ENST00000594511 FAM110CQ1W6H9 321 aa13.16□□□□□ -0.3
XRCC1-204ENST00000594511 FAM83BQ5T0W9 1011 aa13.16□□□□□ -0.3
XRCC1-204ENST00000594511 MB21D1Q8N884 522 aa13.16□□□□□ -0.3
XRCC1-204ENST00000594511 PRPF38AQ8NAV1 312 aaKnown RBP13.16□□□□□ -0.3
XRCC1-204ENST00000594511 PNMA1Q8ND90 353 aa13.16□□□□□ -0.3
XRCC1-204ENST00000594511 REPS2Q8NFH8 660 aa13.16□□□□□ -0.3
XRCC1-204ENST00000594511 ZSWIM6Q9HCJ5 1215 aa13.16□□□□□ -0.3
XRCC1-204ENST00000594511 PPP1R9AQ9ULJ8 1098 aa13.16□□□□□ -0.3
XRCC1-204ENST00000594511 IFIT3O14879 490 aaKnown RBP13.15□□□□□ -0.3
XRCC1-204ENST00000594511 ATP2A1O14983 1001 aa13.15□□□□□ -0.3
XRCC1-204ENST00000594511 FKTNO75072 461 aa13.15□□□□□ -0.3
XRCC1-204ENST00000594511 MCCP23508 829 aa13.15□□□□□ -0.3
XRCC1-204ENST00000594511 PSMA5P28066 241 aa13.15□□□□□ -0.3
XRCC1-204ENST00000594511 SLC1A4P43007 532 aa13.15□□□□□ -0.3
XRCC1-204ENST00000594511 LBX1P52954 281 aa13.15□□□□□ -0.3
XRCC1-204ENST00000594511 EVCP57679 992 aa13.15□□□□□ -0.3
XRCC1-204ENST00000594511 ZNF543Q08ER8 600 aa13.15□□□□□ -0.3
XRCC1-204ENST00000594511 TROAPQ12815 778 aa13.15□□□□□ -0.3
XRCC1-204ENST00000594511 SART3Q15020 963 aaKnown RBP13.15□□□□□ -0.3
XRCC1-204ENST00000594511 IFIT1BQ5T764 474 aaKnown RBP13.15□□□□□ -0.3
XRCC1-204ENST00000594511 FAM160B2Q86V87 743 aa13.15□□□□□ -0.3
XRCC1-204ENST00000594511 ZNF296Q8WUU4 475 aaPredicted RBP13.15□□□□□ -0.3
XRCC1-204ENST00000594511 ALDH8A1Q9H2A2 487 aaPredicted RBP13.15□□□□□ -0.3
XRCC1-204ENST00000594511 SENP2Q9HC62 589 aa13.15□□□□□ -0.3
XRCC1-204ENST00000594511 TXNRD2Q9NNW7 524 aa13.15□□□□□ -0.3
XRCC1-204ENST00000594511 CPA4Q9UI42 421 aa13.15□□□□□ -0.3
XRCC1-204ENST00000594511 VWA5AO00534 786 aa13.14□□□□□ -0.31
XRCC1-204ENST00000594511 CAP1Q01518 475 aa13.14□□□□□ -0.31
XRCC1-204ENST00000594511 WTAPQ15007 396 aa13.14□□□□□ -0.31
XRCC1-204ENST00000594511 Q3C1V9 767 aa13.14□□□□□ -0.31
XRCC1-204ENST00000594511 GPATCH4Q5T3I0 446 aaKnown RBP13.14□□□□□ -0.31
XRCC1-204ENST00000594511 CHURC1Q8WUH1 139 aa13.14□□□□□ -0.31
XRCC1-204ENST00000594511 NUP88Q99567 741 aaPredicted RBP13.14□□□□□ -0.31
XRCC1-204ENST00000594511 KAT14Q9H8E8 782 aa13.14□□□□□ -0.31
XRCC1-204ENST00000594511 GPHNQ9NQX3 736 aaPredicted RBP13.14□□□□□ -0.31
XRCC1-204ENST00000594511 FBXO28Q9NVF7 368 aa13.14□□□□□ -0.31
XRCC1-204ENST00000594511 BTBD7Q9P203 1132 aa13.14□□□□□ -0.31
XRCC1-204ENST00000594511 TSKSQ9UJT2 592 aa13.14□□□□□ -0.31
XRCC1-204ENST00000594511 CASP8AP2Q9UKL3 1982 aa13.13□□□□□ -0.31
XRCC1-204ENST00000594511 ERICH2A1L162 156 aa13.13□□□□□ -0.31
XRCC1-204ENST00000594511 PALM3A6NDB9 673 aaPredicted RBP13.13□□□□□ -0.31
XRCC1-204ENST00000594511 FLOT1O75955 427 aa13.13□□□□□ -0.31
XRCC1-204ENST00000594511 RPS6KB1P23443 525 aa13.13□□□□□ -0.31
XRCC1-204ENST00000594511 RBM25P49756 843 aaKnown RBP13.13□□□□□ -0.31
XRCC1-204ENST00000594511 ERVK-9P63128 1117 aa13.13□□□□□ -0.31
XRCC1-204ENST00000594511 ERVK-24P63145 666 aa13.13□□□□□ -0.31
XRCC1-204ENST00000594511 LACTBP83111 547 aaPredicted RBP13.13□□□□□ -0.31
XRCC1-204ENST00000594511 TMEM67Q5HYA8 995 aa13.13□□□□□ -0.31
XRCC1-204ENST00000594511 RUFY3Q7L099 469 aa13.13□□□□□ -0.31
XRCC1-204ENST00000594511 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.13□□□□□ -0.31
XRCC1-204ENST00000594511 CHST3Q7LGC8 479 aa13.13□□□□□ -0.31
XRCC1-204ENST00000594511 GPRC5AQ8NFJ5 357 aa13.13□□□□□ -0.31
XRCC1-204ENST00000594511 SMCR8Q8TEV9 937 aaPredicted RBP13.13□□□□□ -0.31
XRCC1-204ENST00000594511 ATG4CQ96DT6 458 aa13.13□□□□□ -0.31
XRCC1-204ENST00000594511 JAKMIP1Q96N16 626 aaKnown RBP13.13□□□□□ -0.31
XRCC1-204ENST00000594511 SLF1Q9BQI6 1058 aa13.13□□□□□ -0.31
XRCC1-204ENST00000594511 TANGO6Q9C0B7 1094 aa13.13□□□□□ -0.31
XRCC1-204ENST00000594511 SLC38A10Q9HBR0 1119 aa13.13□□□□□ -0.31
XRCC1-204ENST00000594511 TMEM232C9JQI7 657 aa13.12□□□□□ -0.31
XRCC1-204ENST00000594511 DDAH1O94760 285 aa13.12□□□□□ -0.31
XRCC1-204ENST00000594511 GNRH1P01148 92 aa13.12□□□□□ -0.31
XRCC1-204ENST00000594511 SMARCA1P28370 1054 aa13.12□□□□□ -0.31
XRCC1-204ENST00000594511 CTGFP29279 349 aa13.12□□□□□ -0.31
XRCC1-204ENST00000594511 STAT2P52630 851 aa13.12□□□□□ -0.31
XRCC1-204ENST00000594511 RCAN1P53805 252 aa13.12□□□□□ -0.31
XRCC1-204ENST00000594511 OAZ1P54368 228 aa13.12□□□□□ -0.31
XRCC1-204ENST00000594511 GRM4Q14833 912 aa13.12□□□□□ -0.31
XRCC1-204ENST00000594511 ASPRV1Q53RT3 343 aa13.12□□□□□ -0.31
XRCC1-204ENST00000594511 BLOC1S2Q6QNY1 142 aa13.12□□□□□ -0.31
XRCC1-204ENST00000594511 RASGRP2Q7LDG7 609 aa13.12□□□□□ -0.31
XRCC1-204ENST00000594511 ANKRD13CQ8N6S4 541 aa13.12□□□□□ -0.31
XRCC1-204ENST00000594511 SHCBP1Q8NEM2 672 aa13.12□□□□□ -0.31
XRCC1-204ENST00000594511 MTMR8Q96EF0 704 aa13.12□□□□□ -0.31
XRCC1-204ENST00000594511 ERO1AQ96HE7 468 aa13.12□□□□□ -0.31
XRCC1-204ENST00000594511 KIF2CQ99661 725 aa13.12□□□□□ -0.31
XRCC1-204ENST00000594511 BACH2Q9BYV9 841 aa13.12□□□□□ -0.31
XRCC1-204ENST00000594511 MAD2L2Q9UI95 211 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms