RNA–Protein interactions for RNA: ENST00000590470.1

ZNF397-208, Transcript of zinc finger protein 397, humanhuman

TSL 3

Gene ZNF397, Length 245 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF397-208ENST00000590470 FAM83BQ5T0W9 1011 aa10.9□□□□□ -0.66
ZNF397-208ENST00000590470 OTUD5Q96G74 571 aa10.9□□□□□ -0.66
ZNF397-208ENST00000590470 INTS4Q96HW7 963 aaKnown RBP10.9□□□□□ -0.66
ZNF397-208ENST00000590470 CHAMP1Q96JM3 812 aa10.9□□□□□ -0.66
ZNF397-208ENST00000590470 EMILIN3Q9NT22 766 aa10.9□□□□□ -0.66
ZNF397-208ENST00000590470 ORC3Q9UBD5 711 aaPredicted RBP10.9□□□□□ -0.66
ZNF397-208ENST00000590470 TMX2Q9Y320 296 aa10.9□□□□□ -0.66
ZNF397-208ENST00000590470 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.9□□□□□ -0.66
ZNF397-208ENST00000590470 CSADQ9Y600 493 aa10.9□□□□□ -0.66
ZNF397-208ENST00000590470 V9GY48 417 aaPredicted RBP10.9□□□□□ -0.66
ZNF397-208ENST00000590470 USP17L10C9JJH3 530 aa10.89□□□□□ -0.67
ZNF397-208ENST00000590470 TMEM232C9JQI7 657 aa10.89□□□□□ -0.67
ZNF397-208ENST00000590470 DHX16O60231 1041 aaKnown RBP10.89□□□□□ -0.67
ZNF397-208ENST00000590470 FMNL1O95466 1100 aaPredicted RBP10.89□□□□□ -0.67
ZNF397-208ENST00000590470 YY1P25490 414 aa10.89□□□□□ -0.67
ZNF397-208ENST00000590470 DDIT3P35638 169 aa10.89□□□□□ -0.67
ZNF397-208ENST00000590470 GJA5P36382 358 aa10.89□□□□□ -0.67
ZNF397-208ENST00000590470 SLC1A4P43007 532 aa10.89□□□□□ -0.67
ZNF397-208ENST00000590470 HMGCS2P54868 508 aa10.89□□□□□ -0.67
ZNF397-208ENST00000590470 SSRP1Q08945 709 aaKnown RBP10.89□□□□□ -0.67
ZNF397-208ENST00000590470 NOL9Q5SY16 702 aaKnown RBP10.89□□□□□ -0.67
ZNF397-208ENST00000590470 ARMC9Q7Z3E5 817 aa10.89□□□□□ -0.67
ZNF397-208ENST00000590470 HOMER1Q86YM7 354 aa10.89□□□□□ -0.67
ZNF397-208ENST00000590470 FAM184AQ8NB25 1140 aa10.89□□□□□ -0.67
ZNF397-208ENST00000590470 SHISA4Q96DD7 197 aa10.89□□□□□ -0.67
ZNF397-208ENST00000590470 LLPHQ9BRT6 129 aaKnown RBP10.89□□□□□ -0.67
ZNF397-208ENST00000590470 VCPKMTQ9H867 229 aa10.89□□□□□ -0.67
ZNF397-208ENST00000590470 FBXO28Q9NVF7 368 aa10.89□□□□□ -0.67
ZNF397-208ENST00000590470 ZDHHC9Q9Y397 364 aa10.89□□□□□ -0.67
ZNF397-208ENST00000590470 PARP14Q460N5 1801 aa10.88□□□□□ -0.67
ZNF397-208ENST00000590470 VPS37CA5D8V6 355 aaPredicted RBP10.88□□□□□ -0.67
ZNF397-208ENST00000590470 ADAMTS3O15072 1205 aa10.88□□□□□ -0.67
ZNF397-208ENST00000590470 SNHG28P0DPA3 235 aa10.88□□□□□ -0.67
ZNF397-208ENST00000590470 BMP3P12645 472 aa10.88□□□□□ -0.67
ZNF397-208ENST00000590470 IFNAR1P17181 557 aa10.88□□□□□ -0.67
ZNF397-208ENST00000590470 SYT1P21579 422 aa10.88□□□□□ -0.67
ZNF397-208ENST00000590470 KIF5BP33176 963 aa10.88□□□□□ -0.67
ZNF397-208ENST00000590470 NT5C2P49902 561 aa10.88□□□□□ -0.67
ZNF397-208ENST00000590470 IKQ13123 557 aaPredicted RBP10.88□□□□□ -0.67
ZNF397-208ENST00000590470 FOXD4L6Q3SYB3 417 aaPredicted RBP10.88□□□□□ -0.67
ZNF397-208ENST00000590470 FOXD4L3Q6VB84 417 aaPredicted RBP10.88□□□□□ -0.67
ZNF397-208ENST00000590470 ANKRD13AQ8IZ07 590 aa10.88□□□□□ -0.67
ZNF397-208ENST00000590470 ZNF280CQ8ND82 737 aa10.88□□□□□ -0.67
ZNF397-208ENST00000590470 IL27Q8NEV9 243 aa10.88□□□□□ -0.67
ZNF397-208ENST00000590470 GPKOWQ92917 476 aaPredicted RBP eCLIP10.88□□□□□ -0.67
ZNF397-208ENST00000590470 OPTNQ96CV9 577 aa10.88□□□□□ -0.67
ZNF397-208ENST00000590470 PIGSQ96S52 555 aa10.88□□□□□ -0.67
ZNF397-208ENST00000590470 ALG1Q9BT22 464 aa10.88□□□□□ -0.67
ZNF397-208ENST00000590470 GBA2Q9HCG7 927 aaPredicted RBP10.88□□□□□ -0.67
ZNF397-208ENST00000590470 GOPCQ9HD26 462 aa10.88□□□□□ -0.67
ZNF397-208ENST00000590470 RBM28Q9NW13 759 aaKnown RBP10.88□□□□□ -0.67
ZNF397-208ENST00000590470 AFG3L2Q9Y4W6 797 aa10.88□□□□□ -0.67
ZNF397-208ENST00000590470 COL11A1P12107 1806 aaPredicted RBP10.88□□□□□ -0.67
ZNF397-208ENST00000590470 PKN1Q16512 942 aa10.87□□□□□ -0.67
ZNF397-208ENST00000590470 ASPRV1Q53RT3 343 aa10.87□□□□□ -0.67
ZNF397-208ENST00000590470 LDLRAD1Q5T700 205 aa10.87□□□□□ -0.67
ZNF397-208ENST00000590470 LARP1BQ659C4 914 aaKnown RBP10.87□□□□□ -0.67
ZNF397-208ENST00000590470 CPLX2Q6PUV4 134 aaKnown RBP10.87□□□□□ -0.67
ZNF397-208ENST00000590470 FERMT3Q86UX7 667 aa10.87□□□□□ -0.67
ZNF397-208ENST00000590470 ADGRF4Q8IZF3 695 aa10.87□□□□□ -0.67
ZNF397-208ENST00000590470 ZNF784Q8NCA9 323 aaPredicted RBP10.87□□□□□ -0.67
ZNF397-208ENST00000590470 GMCL1P1Q8NEA9 526 aa10.87□□□□□ -0.67
ZNF397-208ENST00000590470 DCAF4Q8WV16 495 aa10.87□□□□□ -0.67
ZNF397-208ENST00000590470 WDR18Q9BV38 432 aa10.87□□□□□ -0.67
ZNF397-208ENST00000590470 AS3MTQ9HBK9 375 aa10.87□□□□□ -0.67
ZNF397-208ENST00000590470 VPS54Q9P1Q0 977 aa10.87□□□□□ -0.67
ZNF397-208ENST00000590470 KCNJ14Q9UNX9 436 aa10.87□□□□□ -0.67
ZNF397-208ENST00000590470 SMCHD1A6NHR9 2005 aa10.87□□□□□ -0.67
ZNF397-208ENST00000590470 LOC285556D6RIA3 1793 aa10.86□□□□□ -0.67
ZNF397-208ENST00000590470 CCDC196A0A1B0GTZ2 297 aa10.86□□□□□ -0.67
ZNF397-208ENST00000590470 IRF6O14896 467 aa10.86□□□□□ -0.67
ZNF397-208ENST00000590470 PEX10O60683 326 aa10.86□□□□□ -0.67
ZNF397-208ENST00000590470 CDKL5O76039 1030 aa10.86□□□□□ -0.67
ZNF397-208ENST00000590470 RCAN1P53805 252 aa10.86□□□□□ -0.67
ZNF397-208ENST00000590470 BACE1P56817 501 aa10.86□□□□□ -0.67
ZNF397-208ENST00000590470 MAP3K11Q16584 847 aa10.86□□□□□ -0.67
ZNF397-208ENST00000590470 PPP4R3BQ5MIZ7 849 aa10.86□□□□□ -0.67
ZNF397-208ENST00000590470 TREML2Q5T2D2 321 aa10.86□□□□□ -0.67
ZNF397-208ENST00000590470 GADL1Q6ZQY3 521 aa10.86□□□□□ -0.67
ZNF397-208ENST00000590470 C2orf69Q8N8R5 385 aa10.86□□□□□ -0.67
ZNF397-208ENST00000590470 KIFC2Q96AC6 838 aa10.86□□□□□ -0.67
ZNF397-208ENST00000590470 COA7Q96BR5 231 aa10.86□□□□□ -0.67
ZNF397-208ENST00000590470 SLC10A4Q96EP9 437 aa10.86□□□□□ -0.67
ZNF397-208ENST00000590470 MAP3K14Q99558 947 aa10.86□□□□□ -0.67
ZNF397-208ENST00000590470 TANGO6Q9C0B7 1094 aa10.86□□□□□ -0.67
ZNF397-208ENST00000590470 KIAA1683Q9H0B3 1180 aa10.86□□□□□ -0.67
ZNF397-208ENST00000590470 RPAP3Q9H6T3 665 aaPredicted RBP10.86□□□□□ -0.67
ZNF397-208ENST00000590470 JMJD4Q9H9V9 463 aa10.86□□□□□ -0.67
ZNF397-208ENST00000590470 MTMR6Q9Y217 621 aa10.86□□□□□ -0.67
ZNF397-208ENST00000590470 RLFQ13129 1914 aa10.86□□□□□ -0.67
ZNF397-208ENST00000590470 MYH15Q9Y2K3 1946 aa10.86□□□□□ -0.67
ZNF397-208ENST00000590470 PRPF3O43395 683 aaKnown RBP10.85□□□□□ -0.67
ZNF397-208ENST00000590470 STX6O43752 255 aa10.85□□□□□ -0.67
ZNF397-208ENST00000590470 PPP1R11O60927 126 aaPredicted RBP10.85□□□□□ -0.67
ZNF397-208ENST00000590470 VCAM1P19320 739 aa10.85□□□□□ -0.67
ZNF397-208ENST00000590470 HUNKP57058 714 aa10.85□□□□□ -0.67
ZNF397-208ENST00000590470 AKAP17AQ02040 695 aaKnown RBP10.85□□□□□ -0.67
ZNF397-208ENST00000590470 TYW1BQ6NUM6 668 aa10.85□□□□□ -0.67
ZNF397-208ENST00000590470 FAM173BQ6P4H8 233 aa10.85□□□□□ -0.67
ZNF397-208ENST00000590470 CCDC174Q6PII3 467 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms