RNA–Protein interactions for RNA: ENST00000590208.5

MBD1-222, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 2,913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-222ENST00000590208 EIF3HO15372 352 aaKnown RBP eCLIP17.71■□□□□ 0.435e-7■■□□□ 12.6
MBD1-222ENST00000590208 PDE6AP16499 860 aa17.71■□□□□ 0.43
MBD1-222ENST00000590208 CCDC91Q7Z6B0 441 aa17.71■□□□□ 0.43
MBD1-222ENST00000590208 KIAA1328Q86T90 577 aa17.71■□□□□ 0.43
MBD1-222ENST00000590208 SYNE4Q8N205 404 aa17.71■□□□□ 0.43
MBD1-222ENST00000590208 DDX17Q92841 729 aaKnown RBP17.71■□□□□ 0.43
MBD1-222ENST00000590208 MTRQ99707 1265 aa17.71■□□□□ 0.43
MBD1-222ENST00000590208 JADE2Q9NQC1 790 aa17.71■□□□□ 0.43
MBD1-222ENST00000590208 DMGDHQ9UI17 866 aaKnown RBP17.71■□□□□ 0.43
MBD1-222ENST00000590208 ZNF330Q9Y3S2 320 aaPredicted RBP17.71■□□□□ 0.43
MBD1-222ENST00000590208 PAK1Q13153 545 aa17.71■□□□□ 0.43
MBD1-222ENST00000590208 GDAQ9Y2T3 454 aa17.71■□□□□ 0.43
MBD1-222ENST00000590208 RGPD5Q99666 1765 aa17.7■□□□□ 0.42
MBD1-222ENST00000590208 PHRF1Q9P1Y6 1649 aaKnown RBP17.7■□□□□ 0.42
MBD1-222ENST00000590208 MACROD2A1Z1Q3 448 aa17.7■□□□□ 0.42
MBD1-222ENST00000590208 INPP5BP32019 993 aa17.7■□□□□ 0.42
MBD1-222ENST00000590208 METTL24Q5JXM2 366 aa17.7■□□□□ 0.42
MBD1-222ENST00000590208 TEX2Q8IWB9 1127 aa17.7■□□□□ 0.42
MBD1-222ENST00000590208 AENQ8WTP8 325 aaKnown RBP17.7■□□□□ 0.42
MBD1-222ENST00000590208 EEF2KMTQ96G04 330 aa17.7■□□□□ 0.42
MBD1-222ENST00000590208 NAPBQ9H115 298 aa17.7■□□□□ 0.42
MBD1-222ENST00000590208 LUC7L2Q9Y383 392 aaKnown RBP17.7■□□□□ 0.42
MBD1-222ENST00000590208 SLC7A5Q01650 507 aa17.7■□□□□ 0.42
MBD1-222ENST00000590208 IRF2BP1Q8IU81 584 aa17.7■□□□□ 0.42
MBD1-222ENST00000590208 IFNL3Q8IZI9 196 aa17.7■□□□□ 0.42
MBD1-222ENST00000590208 ARL8AQ96BM9 186 aa17.7■□□□□ 0.42
MBD1-222ENST00000590208 RWDD2AQ9UIY3 292 aa17.7■□□□□ 0.42
MBD1-222ENST00000590208 MYH7P12883 1935 aa17.7■□□□□ 0.42
MBD1-222ENST00000590208 MEGF6O75095 1541 aa17.69■□□□□ 0.42
MBD1-222ENST00000590208 CYP27A1Q02318 531 aa17.69■□□□□ 0.42
MBD1-222ENST00000590208 TCIRG1Q13488 830 aa17.69■□□□□ 0.42
MBD1-222ENST00000590208 TRIM14Q14142 442 aa17.69■□□□□ 0.42
MBD1-222ENST00000590208 ANKRD18AQ8IVF6 992 aa17.69■□□□□ 0.42
MBD1-222ENST00000590208 DCAF5Q96JK2 942 aa17.69■□□□□ 0.42
MBD1-222ENST00000590208 SHTN1A0MZ66 631 aa17.69■□□□□ 0.42
MBD1-222ENST00000590208 PRKAB2O43741 272 aa17.69■□□□□ 0.42
MBD1-222ENST00000590208 IDEP14735 1019 aa17.69■□□□□ 0.42
MBD1-222ENST00000590208 MATR3P43243 847 aaKnown RBP eCLIP17.69■□□□□ 0.42
MBD1-222ENST00000590208 GSCP56915 257 aaPredicted RBP17.69■□□□□ 0.42
MBD1-222ENST00000590208 CKAP4Q07065 602 aaKnown RBP17.69■□□□□ 0.42
MBD1-222ENST00000590208 WTAPQ15007 396 aa17.69■□□□□ 0.42
MBD1-222ENST00000590208 SMCR8Q8TEV9 937 aaPredicted RBP17.69■□□□□ 0.42
MBD1-222ENST00000590208 LRRC1Q9BTT6 524 aa17.69■□□□□ 0.42
MBD1-222ENST00000590208 CXorf56Q9H5V9 222 aa17.69■□□□□ 0.42
MBD1-222ENST00000590208 FAM184BQ9ULE4 1060 aa17.69■□□□□ 0.42
MBD1-222ENST00000590208 LAMB4A4D0S4 1761 aa17.69■□□□□ 0.42
MBD1-222ENST00000590208 TJP1Q07157 1748 aa17.68■□□□□ 0.42
MBD1-222ENST00000590208 MYO1FO00160 1098 aa17.68■□□□□ 0.42
MBD1-222ENST00000590208 PDCLQ13371 301 aa17.68■□□□□ 0.42
MBD1-222ENST00000590208 ANKRD20A12PQ8NF67 263 aa17.68■□□□□ 0.42
MBD1-222ENST00000590208 ARMT1Q9H993 441 aa17.68■□□□□ 0.42
MBD1-222ENST00000590208 AGPAT5Q9NUQ2 364 aa17.68■□□□□ 0.42
MBD1-222ENST00000590208 SMARCAL1Q9NZC9 954 aa17.68■□□□□ 0.42
MBD1-222ENST00000590208 CAPN7Q9Y6W3 813 aa17.68■□□□□ 0.42
MBD1-222ENST00000590208 SPAG1Q07617 926 aa17.68■□□□□ 0.42
MBD1-222ENST00000590208 UBE3CQ15386 1083 aa17.68■□□□□ 0.42
MBD1-222ENST00000590208 AKNAD1Q5T1N1 836 aa17.68■□□□□ 0.42
MBD1-222ENST00000590208 FANCBQ8NB91 859 aa17.68■□□□□ 0.42
MBD1-222ENST00000590208 MBD4O95243 580 aa17.68■□□□□ 0.42
MBD1-222ENST00000590208 PARP1P09874 1014 aaKnown RBP17.68■□□□□ 0.42
MBD1-222ENST00000590208 PRCPP42785 496 aa17.68■□□□□ 0.42
MBD1-222ENST00000590208 PHKA1P46020 1223 aa17.68■□□□□ 0.42
MBD1-222ENST00000590208 MFSD6Q6ZSS7 791 aa17.68■□□□□ 0.42
MBD1-222ENST00000590208 MB21D1Q8N884 522 aa17.68■□□□□ 0.42
MBD1-222ENST00000590208 TSEN2Q8NCE0 465 aaKnown RBP17.68■□□□□ 0.42
MBD1-222ENST00000590208 DNAJC7Q99615 494 aa17.68■□□□□ 0.42
MBD1-222ENST00000590208 SH3GL2Q99962 352 aa17.68■□□□□ 0.42
MBD1-222ENST00000590208 TCRBV5S4A2TA0A5A2 114 aa17.67■□□□□ 0.42
MBD1-222ENST00000590208 MAP2K2P36507 400 aa17.67■□□□□ 0.42
MBD1-222ENST00000590208 ATP1A2P50993 1020 aa17.67■□□□□ 0.42
MBD1-222ENST00000590208 PMS1P54277 932 aaKnown RBP17.67■□□□□ 0.42
MBD1-222ENST00000590208 IFIT5Q13325 482 aaKnown RBP17.67■□□□□ 0.42
MBD1-222ENST00000590208 TTMPQ5BVD1 217 aa17.67■□□□□ 0.42
MBD1-222ENST00000590208 SH2D3CQ8N5H7 860 aa17.67■□□□□ 0.42
MBD1-222ENST00000590208 RPGRIP1Q96KN7 1286 aa17.67■□□□□ 0.42
MBD1-222ENST00000590208 PSMB7Q99436 277 aa17.67■□□□□ 0.42
MBD1-222ENST00000590208 AKAP11Q9UKA4 1901 aa17.67■□□□□ 0.42
MBD1-222ENST00000590208 BCL9LQ86UU0 1499 aa17.67■□□□□ 0.42
MBD1-222ENST00000590208 KRT86O43790 486 aa17.67■□□□□ 0.42
MBD1-222ENST00000590208 KLK7P49862 253 aa17.67■□□□□ 0.42
MBD1-222ENST00000590208 KCTD16Q68DU8 428 aa17.67■□□□□ 0.42
MBD1-222ENST00000590208 CSB-PGBD3P0DP91 1061 aa17.66■□□□□ 0.42
MBD1-222ENST00000590208 PTGDRQ13258 359 aa17.66■□□□□ 0.42
MBD1-222ENST00000590208 TSR1Q2NL82 804 aaKnown RBP17.66■□□□□ 0.42
MBD1-222ENST00000590208 LDHAL6AQ6ZMR3 332 aa17.66■□□□□ 0.42
MBD1-222ENST00000590208 ZNF654Q8IZM8 581 aa17.66■□□□□ 0.42
MBD1-222ENST00000590208 EHD2Q9NZN4 543 aa17.66■□□□□ 0.42
MBD1-222ENST00000590208 PATL2C9JE40 543 aaKnown RBP17.66■□□□□ 0.42
MBD1-222ENST00000590208 NDUFAB1O14561 156 aa17.66■□□□□ 0.42
MBD1-222ENST00000590208 CHRM1P11229 460 aaPredicted RBP17.66■□□□□ 0.42
MBD1-222ENST00000590208 SECISBP2LQ93073 1101 aaKnown RBP17.66■□□□□ 0.42
MBD1-222ENST00000590208 SMIM22K7EJ46 135 aa17.65■□□□□ 0.42
MBD1-222ENST00000590208 RIPOR2Q9Y4F9 1068 aa17.65■□□□□ 0.42
MBD1-222ENST00000590208 PKD1L3Q7Z443 1732 aa17.65■□□□□ 0.42
MBD1-222ENST00000590208 PKN1Q16512 942 aa17.65■□□□□ 0.42
MBD1-222ENST00000590208 PDXDC2PQ6P474 469 aa17.65■□□□□ 0.42
MBD1-222ENST00000590208 KRT26Q7Z3Y9 468 aa17.65■□□□□ 0.42
MBD1-222ENST00000590208 CREG2Q8IUH2 290 aa17.65■□□□□ 0.42
MBD1-222ENST00000590208 GPIHBP1Q8IV16 184 aa17.65■□□□□ 0.42
MBD1-222ENST00000590208 MAGEB6Q8N7X4 407 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms