RNA–Protein interactions for RNA: ENST00000590116.5

ZNF554-203, Transcript of zinc finger protein 554, humanhuman

TSL 2

Gene ZNF554, Length 2,486 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF554-203ENST00000590116 VPS16Q9H269 839 aa23.61■■□□□ 1.37
ZNF554-203ENST00000590116 TSPY2A6NKD2 308 aa23.6■■□□□ 1.37
ZNF554-203ENST00000590116 SEMA3EO15041 775 aa23.6■■□□□ 1.37
ZNF554-203ENST00000590116 KRT31Q15323 416 aa23.6■■□□□ 1.37
ZNF554-203ENST00000590116 TBC1D9BQ66K14 1250 aa23.6■■□□□ 1.37
ZNF554-203ENST00000590116 ACRBPQ8NEB7 543 aa23.6■■□□□ 1.37
ZNF554-203ENST00000590116 TAB2Q9NYJ8 693 aa23.6■■□□□ 1.37
ZNF554-203ENST00000590116 MTMR7Q9Y216 660 aa23.6■■□□□ 1.37
ZNF554-203ENST00000590116 RNF225M0QZC1 329 aaPredicted RBP23.6■■□□□ 1.37
ZNF554-203ENST00000590116 SASH3O75995 380 aa23.6■■□□□ 1.37
ZNF554-203ENST00000590116 ABL1P00519 1130 aa23.6■■□□□ 1.37
ZNF554-203ENST00000590116 TFRCP02786 760 aaKnown RBP23.6■■□□□ 1.37
ZNF554-203ENST00000590116 FBXO33Q7Z6M2 555 aa23.6■■□□□ 1.37
ZNF554-203ENST00000590116 GDAQ9Y2T3 454 aa23.6■■□□□ 1.37
ZNF554-203ENST00000590116 PFKFB3Q16875 520 aaPredicted RBP23.59■■□□□ 1.37
ZNF554-203ENST00000590116 LAMB1P07942 1786 aa23.59■■□□□ 1.37
ZNF554-203ENST00000590116 ROBO1Q9Y6N7 1651 aa23.59■■□□□ 1.37
ZNF554-203ENST00000590116 USP17L8P0C7I0 530 aa23.59■■□□□ 1.37
ZNF554-203ENST00000590116 RSRC2Q7L4I2 434 aaKnown RBP23.59■■□□□ 1.37
ZNF554-203ENST00000590116 TXNRD3Q86VQ6 643 aa23.59■■□□□ 1.37
ZNF554-203ENST00000590116 GPR161Q8N6U8 529 aaKnown RBP23.59■■□□□ 1.37
ZNF554-203ENST00000590116 ERICH4A6NGS2 130 aa23.58■■□□□ 1.37
ZNF554-203ENST00000590116 TRAPPC10P48553 1259 aa23.58■■□□□ 1.37
ZNF554-203ENST00000590116 RCSD1Q6JBY9 416 aa23.58■■□□□ 1.37
ZNF554-203ENST00000590116 N4BP3O15049 544 aa23.58■■□□□ 1.37
ZNF554-203ENST00000590116 CNGA4Q8IV77 575 aa23.58■■□□□ 1.37
ZNF554-203ENST00000590116 STAG2Q8N3U4 1231 aa23.58■■□□□ 1.37
ZNF554-203ENST00000590116 PUF60Q9UHX1 559 aaKnown RBP23.58■■□□□ 1.37
ZNF554-203ENST00000590116 PP2D1A8MPX8 630 aa23.57■■□□□ 1.36
ZNF554-203ENST00000590116 MCM9Q9NXL9 1143 aa23.57■■□□□ 1.36
ZNF554-203ENST00000590116 KIAA1551Q9HCM1 1747 aa23.57■■□□□ 1.36
ZNF554-203ENST00000590116 POLR3GO15318 223 aaPredicted RBP23.57■■□□□ 1.36
ZNF554-203ENST00000590116 KIF5CO60282 957 aa23.57■■□□□ 1.36
ZNF554-203ENST00000590116 ERVK-24P63145 666 aa23.57■■□□□ 1.36
ZNF554-203ENST00000590116 CC2D1AQ6P1N0 951 aaPredicted RBP23.57■■□□□ 1.36
ZNF554-203ENST00000590116 NELFBQ8WX92 580 aa23.57■■□□□ 1.36
ZNF554-203ENST00000590116 ZBTB9Q96C00 473 aa23.57■■□□□ 1.36
ZNF554-203ENST00000590116 PARD6BQ9BYG5 372 aa23.57■■□□□ 1.36
ZNF554-203ENST00000590116 ATP8A2Q9NTI2 1148 aa23.57■■□□□ 1.36
ZNF554-203ENST00000590116 GTPBP6O43824 516 aaPredicted RBP23.56■■□□□ 1.36
ZNF554-203ENST00000590116 HIBADHP31937 336 aaKnown RBP23.56■■□□□ 1.36
ZNF554-203ENST00000590116 PAK1Q13153 545 aa23.56■■□□□ 1.36
ZNF554-203ENST00000590116 ZNF569Q5MCW4 686 aa23.56■■□□□ 1.36
ZNF554-203ENST00000590116 TYW1BQ6NUM6 668 aa23.56■■□□□ 1.36
ZNF554-203ENST00000590116 GOLGA1Q92805 767 aa23.56■■□□□ 1.36
ZNF554-203ENST00000590116 DYNLL2Q96FJ2 89 aa23.56■■□□□ 1.36
ZNF554-203ENST00000590116 PLIN2Q99541 437 aa23.56■■□□□ 1.36
ZNF554-203ENST00000590116 ARPP21Q9UBL0 812 aaPredicted RBP23.56■■□□□ 1.36
ZNF554-203ENST00000590116 SRP68Q9UHB9 627 aaKnown RBP23.56■■□□□ 1.36
ZNF554-203ENST00000590116 RWDD2AQ9UIY3 292 aa23.56■■□□□ 1.36
ZNF554-203ENST00000590116 THRAP3Q9Y2W1 955 aaKnown RBP23.56■■□□□ 1.36
ZNF554-203ENST00000590116 COL5A3P25940 1745 aaPredicted RBP23.56■■□□□ 1.36
ZNF554-203ENST00000590116 COL22A1Q8NFW1 1626 aaPredicted RBP23.56■■□□□ 1.36
ZNF554-203ENST00000590116 TRIM49BA6NDI0 452 aa23.56■■□□□ 1.36
ZNF554-203ENST00000590116 TBC1D8O95759 1140 aa23.56■■□□□ 1.36
ZNF554-203ENST00000590116 RASGRP2Q7LDG7 609 aa23.56■■□□□ 1.36
ZNF554-203ENST00000590116 RPS8P62241 208 aaKnown RBP23.55■■□□□ 1.36
ZNF554-203ENST00000590116 RABGGTAQ92696 567 aa23.55■■□□□ 1.36
ZNF554-203ENST00000590116 LIMA1Q9UHB6 759 aaKnown RBP23.55■■□□□ 1.36
ZNF554-203ENST00000590116 ITIH6Q6UXX5 1313 aa23.55■■□□□ 1.36
ZNF554-203ENST00000590116 KIF5BP33176 963 aa23.55■■□□□ 1.36
ZNF554-203ENST00000590116 COPB1P53618 953 aaKnown RBP23.55■■□□□ 1.36
ZNF554-203ENST00000590116 SMARCC1Q92922 1105 aaPredicted RBP23.55■■□□□ 1.36
ZNF554-203ENST00000590116 PYM1Q9BRP8 204 aaKnown RBP23.55■■□□□ 1.36
ZNF554-203ENST00000590116 RPN1P04843 607 aaKnown RBP23.54■■□□□ 1.36
ZNF554-203ENST00000590116 ZNF658Q5TYW1 1059 aaPredicted RBP23.54■■□□□ 1.36
ZNF554-203ENST00000590116 PTF1AQ7RTS3 328 aa23.54■■□□□ 1.36
ZNF554-203ENST00000590116 KAT14Q9H8E8 782 aa23.54■■□□□ 1.36
ZNF554-203ENST00000590116 IL17RBQ9NRM6 502 aa23.54■■□□□ 1.36
ZNF554-203ENST00000590116 NUTM2BA6NNL0 878 aaPredicted RBP23.54■■□□□ 1.36
ZNF554-203ENST00000590116 NUTM2EB1AL46 878 aaPredicted RBP23.54■■□□□ 1.36
ZNF554-203ENST00000590116 KCNJ18B7U540 433 aa23.54■■□□□ 1.36
ZNF554-203ENST00000590116 PRCPP42785 496 aa23.54■■□□□ 1.36
ZNF554-203ENST00000590116 TFAP4Q01664 338 aa23.54■■□□□ 1.36
ZNF554-203ENST00000590116 KCNJ12Q14500 433 aa23.54■■□□□ 1.36
ZNF554-203ENST00000590116 BLIDQ8IZY5 108 aa23.54■■□□□ 1.36
ZNF554-203ENST00000590116 CCDC51Q96ER9 411 aa23.54■■□□□ 1.36
ZNF554-203ENST00000590116 NUP88Q99567 741 aaPredicted RBP23.54■■□□□ 1.36
ZNF554-203ENST00000590116 ABHD10Q9NUJ1 306 aa23.54■■□□□ 1.36
ZNF554-203ENST00000590116 CALML3P27482 149 aa23.53■■□□□ 1.36
ZNF554-203ENST00000590116 STAT6P42226 847 aa23.53■■□□□ 1.36
ZNF554-203ENST00000590116 TCP11X2Q5H9J9 407 aa23.53■■□□□ 1.36
ZNF554-203ENST00000590116 C4orf32Q8N8J7 132 aa23.53■■□□□ 1.36
ZNF554-203ENST00000590116 USP17L3A6NCW0 530 aa23.53■■□□□ 1.36
ZNF554-203ENST00000590116 USP17L4A6NCW7 530 aa23.53■■□□□ 1.36
ZNF554-203ENST00000590116 LRRC10BA6NIK2 292 aa23.53■■□□□ 1.36
ZNF554-203ENST00000590116 ARL6IP4Q66PJ3 421 aaKnown RBP23.53■■□□□ 1.36
ZNF554-203ENST00000590116 USP17L1Q7RTZ2 530 aa23.53■■□□□ 1.36
ZNF554-203ENST00000590116 SLC35F6Q8N357 371 aa23.53■■□□□ 1.36
ZNF554-203ENST00000590116 NRAPQ86VF7 1730 aa23.52■■□□□ 1.36
ZNF554-203ENST00000590116 LONP1P36776 959 aaKnown RBP23.52■■□□□ 1.36
ZNF554-203ENST00000590116 TXLNAP40222 546 aa23.52■■□□□ 1.36
ZNF554-203ENST00000590116 CHMP4BP1P59074 171 aa23.52■■□□□ 1.36
ZNF554-203ENST00000590116 SPAG1Q07617 926 aa23.52■■□□□ 1.36
ZNF554-203ENST00000590116 SLC35G1Q2M3R5 365 aa23.52■■□□□ 1.36
ZNF554-203ENST00000590116 SBK1Q52WX2 424 aa23.52■■□□□ 1.36
ZNF554-203ENST00000590116 DZIP1Q86YF9 867 aaKnown RBP23.52■■□□□ 1.36
ZNF554-203ENST00000590116 ANKRD20A12PQ8NF67 263 aa23.52■■□□□ 1.36
ZNF554-203ENST00000590116 TMEM60Q9H2L4 133 aa23.52■■□□□ 1.36
ZNF554-203ENST00000590116 ARFGAP3Q9NP61 516 aa23.52■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms