RNA–Protein interactions for RNA: ENST00000589753.1

ATG4D-211, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-211ENST00000589753 MANSC4A6NHS7 340 aaPredicted RBP17.71■□□□□ 0.43
ATG4D-211ENST00000589753 GOLGA8AA7E2F4 631 aa17.71■□□□□ 0.43
ATG4D-211ENST00000589753 BMP3P12645 472 aa17.71■□□□□ 0.43
ATG4D-211ENST00000589753 KIF5BP33176 963 aa17.71■□□□□ 0.43
ATG4D-211ENST00000589753 METAP2P50579 478 aaKnown RBP eCLIP17.71■□□□□ 0.43
ATG4D-211ENST00000589753 ZNF543Q08ER8 600 aa17.71■□□□□ 0.43
ATG4D-211ENST00000589753 STK3Q13188 491 aa17.71■□□□□ 0.43
ATG4D-211ENST00000589753 CCL15Q16663 113 aa17.71■□□□□ 0.43
ATG4D-211ENST00000589753 ASPRV1Q53RT3 343 aa17.71■□□□□ 0.43
ATG4D-211ENST00000589753 FAM83BQ5T0W9 1011 aa17.71■□□□□ 0.43
ATG4D-211ENST00000589753 CCDC144CPQ8IYA2 1237 aa17.71■□□□□ 0.43
ATG4D-211ENST00000589753 FANCBQ8NB91 859 aa17.71■□□□□ 0.43
ATG4D-211ENST00000589753 CAPNS2Q96L46 248 aa17.71■□□□□ 0.43
ATG4D-211ENST00000589753 ZSCAN31Q96LW9 406 aaPredicted RBP17.71■□□□□ 0.43
ATG4D-211ENST00000589753 NUP88Q99567 741 aaPredicted RBP17.71■□□□□ 0.43
ATG4D-211ENST00000589753 ISY1Q9ULR0 285 aaKnown RBP17.71■□□□□ 0.43
ATG4D-211ENST00000589753 HPS5Q9UPZ3 1129 aa17.71■□□□□ 0.43
ATG4D-211ENST00000589753 NID2Q14112 1375 aa17.7■□□□□ 0.42
ATG4D-211ENST00000589753 HSPA6P17066 643 aa17.7■□□□□ 0.42
ATG4D-211ENST00000589753 HTRA3P83110 453 aa17.7■□□□□ 0.42
ATG4D-211ENST00000589753 MOGSQ13724 837 aa17.7■□□□□ 0.42
ATG4D-211ENST00000589753 ME3Q16798 604 aa17.7■□□□□ 0.42
ATG4D-211ENST00000589753 RTN1Q16799 776 aa17.7■□□□□ 0.42
ATG4D-211ENST00000589753 GPATCH4Q5T3I0 446 aaKnown RBP17.7■□□□□ 0.42
ATG4D-211ENST00000589753 KCTD1Q719H9 257 aa17.7■□□□□ 0.42
ATG4D-211ENST00000589753 SNX21Q969T3 373 aa17.7■□□□□ 0.42
ATG4D-211ENST00000589753 SLKQ9H2G2 1235 aaPredicted RBP17.7■□□□□ 0.42
ATG4D-211ENST00000589753 RPAP3Q9H6T3 665 aaPredicted RBP17.7■□□□□ 0.42
ATG4D-211ENST00000589753 TSHZ2Q9NRE2 1034 aa17.7■□□□□ 0.42
ATG4D-211ENST00000589753 MAD2L2Q9UI95 211 aa17.7■□□□□ 0.42
ATG4D-211ENST00000589753 FRMPD2Q68DX3 1309 aaPredicted RBP17.7■□□□□ 0.42
ATG4D-211ENST00000589753 PALM3A6NDB9 673 aaPredicted RBP17.69■□□□□ 0.42
ATG4D-211ENST00000589753 PFKFB2O60825 505 aa17.69■□□□□ 0.42
ATG4D-211ENST00000589753 LARGE1O95461 756 aa17.69■□□□□ 0.42
ATG4D-211ENST00000589753 GOLGA8HP0CJ92 632 aa17.69■□□□□ 0.42
ATG4D-211ENST00000589753 CCT2P78371 535 aaKnown RBP17.69■□□□□ 0.42
ATG4D-211ENST00000589753 NOGQ13253 232 aa17.69■□□□□ 0.42
ATG4D-211ENST00000589753 PPP2R5BQ15173 497 aa17.69■□□□□ 0.42
ATG4D-211ENST00000589753 TREML2Q5T2D2 321 aa17.69■□□□□ 0.42
ATG4D-211ENST00000589753 BRI3BPQ8WY22 251 aa17.69■□□□□ 0.42
ATG4D-211ENST00000589753 TANGO6Q9C0B7 1094 aa17.69■□□□□ 0.42
ATG4D-211ENST00000589753 GPCPD1Q9NPB8 672 aa17.69■□□□□ 0.42
ATG4D-211ENST00000589753 SH2B1Q9NRF2 756 aaPredicted RBP17.69■□□□□ 0.42
ATG4D-211ENST00000589753 RBM28Q9NW13 759 aaKnown RBP17.69■□□□□ 0.42
ATG4D-211ENST00000589753 AGTPBP1Q9UPW5 1226 aa17.69■□□□□ 0.42
ATG4D-211ENST00000589753 CCDC196A0A1B0GTZ2 297 aa17.68■□□□□ 0.42
ATG4D-211ENST00000589753 TESPA1A2RU30 521 aaPredicted RBP17.68■□□□□ 0.42
ATG4D-211ENST00000589753 USP17L15C9J2P7 530 aa17.68■□□□□ 0.42
ATG4D-211ENST00000589753 USP17L13C9JLJ4 530 aa17.68■□□□□ 0.42
ATG4D-211ENST00000589753 TMEM232C9JQI7 657 aa17.68■□□□□ 0.42
ATG4D-211ENST00000589753 USP17L11C9JVI0 530 aa17.68■□□□□ 0.42
ATG4D-211ENST00000589753 USP17L18D6R9N7 530 aa17.68■□□□□ 0.42
ATG4D-211ENST00000589753 USP17L22D6RA61 530 aa17.68■□□□□ 0.42
ATG4D-211ENST00000589753 USP17L17D6RBQ6 530 aa17.68■□□□□ 0.42
ATG4D-211ENST00000589753 USP17L19D6RCP7 530 aa17.68■□□□□ 0.42
ATG4D-211ENST00000589753 USP17L20D6RJB6 530 aa17.68■□□□□ 0.42
ATG4D-211ENST00000589753 GNAQP50148 359 aa17.68■□□□□ 0.42
ATG4D-211ENST00000589753 INHBEP58166 350 aa17.68■□□□□ 0.42
ATG4D-211ENST00000589753 USP17L24Q0WX57 530 aa17.68■□□□□ 0.42
ATG4D-211ENST00000589753 GPAT2Q6NUI2 795 aa17.68■□□□□ 0.42
ATG4D-211ENST00000589753 HSCBQ8IWL3 235 aa17.68■□□□□ 0.42
ATG4D-211ENST00000589753 STAG2Q8N3U4 1231 aa17.68■□□□□ 0.42
ATG4D-211ENST00000589753 KLRF2D3W0D1 207 aa17.67■□□□□ 0.42
ATG4D-211ENST00000589753 CDC27P30260 824 aa17.67■□□□□ 0.42
ATG4D-211ENST00000589753 HOXA7P31268 230 aaPredicted RBP17.67■□□□□ 0.42
ATG4D-211ENST00000589753 STAT2P52630 851 aa17.67■□□□□ 0.42
ATG4D-211ENST00000589753 KIF23Q02241 960 aaPredicted RBP17.67■□□□□ 0.42
ATG4D-211ENST00000589753 SCRN1Q12765 414 aa17.67■□□□□ 0.42
ATG4D-211ENST00000589753 SREBF2Q12772 1141 aa17.67■□□□□ 0.42
ATG4D-211ENST00000589753 IKQ13123 557 aaPredicted RBP17.67■□□□□ 0.42
ATG4D-211ENST00000589753 PABPC4Q13310 644 aaKnown RBP eCLIP17.67■□□□□ 0.426e-10■■■□□ 17.6
ATG4D-211ENST00000589753 TTBK2Q6IQ55 1244 aa17.67■□□□□ 0.42
ATG4D-211ENST00000589753 CATSPERGQ6ZRH7 1159 aa17.67■□□□□ 0.42
ATG4D-211ENST00000589753 ANKRD23Q86SG2 305 aa17.67■□□□□ 0.42
ATG4D-211ENST00000589753 NECAB1Q8N987 351 aa17.67■□□□□ 0.42
ATG4D-211ENST00000589753 GTF3C6Q969F1 213 aa17.67■□□□□ 0.42
ATG4D-211ENST00000589753 TMX3Q96JJ7 454 aa17.67■□□□□ 0.42
ATG4D-211ENST00000589753 LZTS2Q9BRK4 669 aa17.67■□□□□ 0.42
ATG4D-211ENST00000589753 NCOA5Q9HCD5 579 aaKnown RBP17.67■□□□□ 0.42
ATG4D-211ENST00000589753 FAM217BQ9NTX9 383 aaPredicted RBP17.67■□□□□ 0.42
ATG4D-211ENST00000589753 FEM1BQ9UK73 627 aa17.67■□□□□ 0.42
ATG4D-211ENST00000589753 WDR33Q9C0J8 1336 aaKnown RBP17.67■□□□□ 0.42
ATG4D-211ENST00000589753 BTBD19C9JJ37 291 aa17.66■□□□□ 0.42
ATG4D-211ENST00000589753 K7ELQ4 463 aaPredicted RBP17.66■□□□□ 0.42
ATG4D-211ENST00000589753 DHX16O60231 1041 aaKnown RBP17.66■□□□□ 0.42
ATG4D-211ENST00000589753 PLA2G6O60733 806 aa17.66■□□□□ 0.42
ATG4D-211ENST00000589753 AOC2O75106 756 aa17.66■□□□□ 0.42
ATG4D-211ENST00000589753 ADD1P35611 737 aaKnown RBP17.66■□□□□ 0.42
ATG4D-211ENST00000589753 VEGFBP49765 207 aa17.66■□□□□ 0.42
ATG4D-211ENST00000589753 BTNL9Q6UXG8 535 aa17.66■□□□□ 0.42
ATG4D-211ENST00000589753 TMTC3Q6ZXV5 915 aa17.66■□□□□ 0.42
ATG4D-211ENST00000589753 FAM160B2Q86V87 743 aa17.66■□□□□ 0.42
ATG4D-211ENST00000589753 CHURC1Q8WUH1 139 aa17.66■□□□□ 0.42
ATG4D-211ENST00000589753 ZIC5Q96T25 663 aa17.66■□□□□ 0.42
ATG4D-211ENST00000589753 PTPN18Q99952 460 aa17.66■□□□□ 0.42
ATG4D-211ENST00000589753 SLC45A1Q9Y2W3 748 aa17.66■□□□□ 0.42
ATG4D-211ENST00000589753 PDHXO00330 501 aa17.65■□□□□ 0.42
ATG4D-211ENST00000589753 CPLX1O14810 134 aa17.65■□□□□ 0.42
ATG4D-211ENST00000589753 FLOT1O75955 427 aa17.65■□□□□ 0.42
ATG4D-211ENST00000589753 PLEKHA8P1O95397 391 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms