RNA–Protein interactions for RNA: ENST00000589528.1

ACTN4-211, Transcript of actinin alpha 4, humanhuman

TSL 2

Gene ACTN4, Length 441 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-211ENST00000589528 KIAA1755Q5JYT7 1200 aa18.39■□□□□ 0.53
ACTN4-211ENST00000589528 CEP85Q6P2H3 762 aa18.39■□□□□ 0.53
ACTN4-211ENST00000589528 CLEC10AQ8IUN9 316 aa18.39■□□□□ 0.53
ACTN4-211ENST00000589528 VCPKMTQ9H867 229 aa18.39■□□□□ 0.53
ACTN4-211ENST00000589528 NRBP1Q9UHY1 535 aa18.39■□□□□ 0.53
ACTN4-211ENST00000589528 APBB1O00213 710 aa18.38■□□□□ 0.53
ACTN4-211ENST00000589528 WDR46O15213 610 aaKnown RBP18.38■□□□□ 0.53
ACTN4-211ENST00000589528 CYP2D6P10635 497 aa18.38■□□□□ 0.53
ACTN4-211ENST00000589528 RAG1P15918 1043 aa18.38■□□□□ 0.53
ACTN4-211ENST00000589528 CLASRPQ8N2M8 674 aaKnown RBP18.38■□□□□ 0.53
ACTN4-211ENST00000589528 LCORLQ8N3X6 602 aa18.38■□□□□ 0.53
ACTN4-211ENST00000589528 DYNLL2Q96FJ2 89 aa18.38■□□□□ 0.53
ACTN4-211ENST00000589528 DDRGK1Q96HY6 314 aa18.38■□□□□ 0.53
ACTN4-211ENST00000589528 PHF24Q9UPV7 400 aa18.38■□□□□ 0.53
ACTN4-211ENST00000589528 TMX2Q9Y320 296 aa18.38■□□□□ 0.53
ACTN4-211ENST00000589528 PQBP1O60828 265 aaKnown RBP18.37■□□□□ 0.53
ACTN4-211ENST00000589528 PGK1P00558 417 aa18.37■□□□□ 0.53
ACTN4-211ENST00000589528 PGK2P07205 417 aa18.37■□□□□ 0.53
ACTN4-211ENST00000589528 IFIT2P09913 472 aaKnown RBP18.37■□□□□ 0.53
ACTN4-211ENST00000589528 RLBP1P12271 317 aa18.37■□□□□ 0.53
ACTN4-211ENST00000589528 AKR1B1P15121 316 aa18.37■□□□□ 0.53
ACTN4-211ENST00000589528 TMEM132BQ14DG7 1078 aa18.37■□□□□ 0.53
ACTN4-211ENST00000589528 RHPN1Q8TCX5 695 aa18.37■□□□□ 0.53
ACTN4-211ENST00000589528 TTYH1Q9H313 450 aaPredicted RBP18.37■□□□□ 0.53
ACTN4-211ENST00000589528 ARMT1Q9H993 441 aa18.37■□□□□ 0.53
ACTN4-211ENST00000589528 CNPY2Q9Y2B0 182 aa18.37■□□□□ 0.53
ACTN4-211ENST00000589528 TMEM265A0A087WTH1 108 aa18.36■□□□□ 0.53
ACTN4-211ENST00000589528 MYH7P12883 1935 aa18.36■□□□□ 0.53
ACTN4-211ENST00000589528 FPGSQ05932 587 aa18.36■□□□□ 0.53
ACTN4-211ENST00000589528 CCDC17Q96LX7 622 aa18.36■□□□□ 0.53
ACTN4-211ENST00000589528 TINF2Q9BSI4 451 aa18.36■□□□□ 0.53
ACTN4-211ENST00000589528 GOPCQ9HD26 462 aa18.36■□□□□ 0.53
ACTN4-211ENST00000589528 ATP8A2Q9NTI2 1148 aa18.36■□□□□ 0.53
ACTN4-211ENST00000589528 TMEM39AQ9NV64 488 aa18.36■□□□□ 0.53
ACTN4-211ENST00000589528 MYO9BQ13459 2157 aa18.35■□□□□ 0.53
ACTN4-211ENST00000589528 A0A1W2PQ45 241 aaPredicted RBP18.35■□□□□ 0.53
ACTN4-211ENST00000589528 A0A1W2PQY0 241 aa18.35■□□□□ 0.53
ACTN4-211ENST00000589528 AKR1A1P14550 325 aa18.35■□□□□ 0.53
ACTN4-211ENST00000589528 COPB2P35606 906 aa18.35■□□□□ 0.53
ACTN4-211ENST00000589528 RIOX2Q8IUF8 465 aa18.35■□□□□ 0.53
ACTN4-211ENST00000589528 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.35■□□□□ 0.53
ACTN4-211ENST00000589528 SYMPKQ92797 1274 aaKnown RBP18.35■□□□□ 0.53
ACTN4-211ENST00000589528 TCRBV5S4A2TA0A5A2 114 aa18.34■□□□□ 0.53
ACTN4-211ENST00000589528 DCDC2CA8MYV0 355 aa18.34■□□□□ 0.53
ACTN4-211ENST00000589528 MBD4O95243 580 aa18.34■□□□□ 0.53
ACTN4-211ENST00000589528 STAT3P40763 770 aa18.34■□□□□ 0.53
ACTN4-211ENST00000589528 CDK8P49336 464 aa18.34■□□□□ 0.53
ACTN4-211ENST00000589528 NUP133Q8WUM0 1156 aa18.34■□□□□ 0.53
ACTN4-211ENST00000589528 KIF1BPQ96EK5 621 aa18.34■□□□□ 0.53
ACTN4-211ENST00000589528 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.34■□□□□ 0.531e-6■■□□□ 12.9
ACTN4-211ENST00000589528 DIS3Q9Y2L1 958 aaKnown RBP18.34■□□□□ 0.53
ACTN4-211ENST00000589528 PRKAB2O43741 272 aa18.33■□□□□ 0.52
ACTN4-211ENST00000589528 EEF2P13639 858 aaKnown RBP18.33■□□□□ 0.52
ACTN4-211ENST00000589528 ITGB8P26012 769 aa18.33■□□□□ 0.52
ACTN4-211ENST00000589528 SIAH1Q8IUQ4 282 aa18.33■□□□□ 0.52
ACTN4-211ENST00000589528 KANSL2Q9H9L4 492 aa18.33■□□□□ 0.52
ACTN4-211ENST00000589528 STARD7Q9NQZ5 370 aa18.33■□□□□ 0.52
ACTN4-211ENST00000589528 FBXO28Q9NVF7 368 aa18.33■□□□□ 0.52
ACTN4-211ENST00000589528 PAG1Q9NWQ8 432 aa18.33■□□□□ 0.52
ACTN4-211ENST00000589528 ROBO3Q96MS0 1386 aa18.32■□□□□ 0.52
ACTN4-211ENST00000589528 VWA5AO00534 786 aa18.32■□□□□ 0.52
ACTN4-211ENST00000589528 KIAA0355O15063 1070 aa18.32■□□□□ 0.52
ACTN4-211ENST00000589528 TAL1P17542 331 aaPredicted RBP18.32■□□□□ 0.52
ACTN4-211ENST00000589528 ZNF792Q3KQV3 632 aa18.32■□□□□ 0.52
ACTN4-211ENST00000589528 C16orf86Q6ZW13 317 aa18.32■□□□□ 0.52
ACTN4-211ENST00000589528 LENG1Q96BZ8 264 aaPredicted RBP18.32■□□□□ 0.52
ACTN4-211ENST00000589528 PPP1R9AQ9ULJ8 1098 aa18.32■□□□□ 0.52
ACTN4-211ENST00000589528 CTDP1Q9Y5B0 961 aaPredicted RBP18.32■□□□□ 0.52
ACTN4-211ENST00000589528 CYP2D7A0A087X1C5 515 aa18.31■□□□□ 0.52
ACTN4-211ENST00000589528 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.31■□□□□ 0.52
ACTN4-211ENST00000589528 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.31■□□□□ 0.52
ACTN4-211ENST00000589528 USP17L12C9JPN9 530 aa18.31■□□□□ 0.52
ACTN4-211ENST00000589528 USP17L21D6R901 530 aa18.31■□□□□ 0.52
ACTN4-211ENST00000589528 HMMRO75330 724 aa18.31■□□□□ 0.52
ACTN4-211ENST00000589528 DNAJB2P25686 324 aa18.31■□□□□ 0.52
ACTN4-211ENST00000589528 ADD2P35612 726 aa18.31■□□□□ 0.52
ACTN4-211ENST00000589528 FAM83BQ5T0W9 1011 aa18.31■□□□□ 0.52
ACTN4-211ENST00000589528 C12orf60Q5U649 245 aa18.31■□□□□ 0.52
ACTN4-211ENST00000589528 DDX11Q96FC9 970 aa18.31■□□□□ 0.52
ACTN4-211ENST00000589528 TSEN34Q9BSV6 310 aaKnown RBP18.31■□□□□ 0.52
ACTN4-211ENST00000589528 BOLA2Q9H3K6 86 aa18.31■□□□□ 0.52
ACTN4-211ENST00000589528 PRDM6Q9NQX0 595 aa18.31■□□□□ 0.52
ACTN4-211ENST00000589528 FAM184BQ9ULE4 1060 aa18.31■□□□□ 0.52
ACTN4-211ENST00000589528 ADAMTS5Q9UNA0 930 aa18.31■□□□□ 0.52
ACTN4-211ENST00000589528 MCM3APO60318 1980 aa18.31■□□□□ 0.52
ACTN4-211ENST00000589528 MOXD2PA6NHM9 499 aa18.3■□□□□ 0.52
ACTN4-211ENST00000589528 ZNF865P0CJ78 1059 aaPredicted RBP18.3■□□□□ 0.52
ACTN4-211ENST00000589528 SLC4A3P48751 1232 aa18.3■□□□□ 0.52
ACTN4-211ENST00000589528 ACLYP53396 1101 aa18.3■□□□□ 0.52
ACTN4-211ENST00000589528 EPHB4P54760 987 aa18.3■□□□□ 0.52
ACTN4-211ENST00000589528 TOX2Q96NM4 488 aa18.3■□□□□ 0.52
ACTN4-211ENST00000589528 ZHX1Q9UKY1 873 aaPredicted RBP18.3■□□□□ 0.52
ACTN4-211ENST00000589528 SLC4A4Q9Y6R1 1079 aa18.3■□□□□ 0.52
ACTN4-211ENST00000589528 MYH4Q9Y623 1939 aa18.29■□□□□ 0.52
ACTN4-211ENST00000589528 MROH7Q68CQ1 1323 aa18.29■□□□□ 0.52
ACTN4-211ENST00000589528 SYNRGQ9UMZ2 1314 aa18.29■□□□□ 0.52
ACTN4-211ENST00000589528 ADAMTS4O75173 837 aa18.29■□□□□ 0.52
ACTN4-211ENST00000589528 FAAP100Q0VG06 881 aa18.29■□□□□ 0.52
ACTN4-211ENST00000589528 SLFNL1Q499Z3 407 aa18.29■□□□□ 0.52
ACTN4-211ENST00000589528 SNRNP48Q6IEG0 339 aaKnown RBP18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms