RNA–Protein interactions for RNA: ENST00000589492.1

BECN1-209, Transcript of beclin 1, humanhuman

TSL 2

Gene BECN1, Length 597 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BECN1-209ENST00000589492 WDR18Q9BV38 432 aa8.04□□□□□ -1.12
BECN1-209ENST00000589492 LNPKQ9C0E8 428 aa8.04□□□□□ -1.12
BECN1-209ENST00000589492 NKX2-4Q9H2Z4 354 aa8.04□□□□□ -1.12
BECN1-209ENST00000589492 TMEM39AQ9NV64 488 aa8.04□□□□□ -1.12
BECN1-209ENST00000589492 PA2G4Q9UQ80 394 aaKnown RBP8.04□□□□□ -1.12
BECN1-209ENST00000589492 FPGT-TNNI3KV9GXZ4 949 aa8.04□□□□□ -1.12
BECN1-209ENST00000589492 SEPT4O43236 478 aa8.03□□□□□ -1.12
BECN1-209ENST00000589492 UQCRFS1P1P0C7P4 283 aa8.03□□□□□ -1.12
BECN1-209ENST00000589492 PHKA1P46020 1223 aa8.03□□□□□ -1.12
BECN1-209ENST00000589492 FAAP100Q0VG06 881 aa8.03□□□□□ -1.12
BECN1-209ENST00000589492 GRB14Q14449 540 aa8.03□□□□□ -1.12
BECN1-209ENST00000589492 SKIV2LQ15477 1246 aaKnown RBP8.03□□□□□ -1.12
BECN1-209ENST00000589492 ATP2B3Q16720 1220 aa8.03□□□□□ -1.12
BECN1-209ENST00000589492 AAK1Q2M2I8 961 aa8.03□□□□□ -1.12
BECN1-209ENST00000589492 BMP2KLQ5H9B9 411 aa8.03□□□□□ -1.12
BECN1-209ENST00000589492 TMEM240Q5SV17 173 aa8.03□□□□□ -1.12
BECN1-209ENST00000589492 PRAMEF19Q5SWL8 479 aa8.03□□□□□ -1.12
BECN1-209ENST00000589492 GORABQ5T7V8 394 aa8.03□□□□□ -1.12
BECN1-209ENST00000589492 C16orf59Q7L2K0 433 aa8.03□□□□□ -1.12
BECN1-209ENST00000589492 AACSQ86V21 672 aa8.03□□□□□ -1.12
BECN1-209ENST00000589492 DZIP1Q86YF9 867 aaKnown RBP8.03□□□□□ -1.12
BECN1-209ENST00000589492 GTF3C2Q8WUA4 911 aaPredicted RBP8.03□□□□□ -1.12
BECN1-209ENST00000589492 ZNF512BQ96KM6 892 aaPredicted RBP8.03□□□□□ -1.12
BECN1-209ENST00000589492 ECHDC1Q9NTX5 307 aa8.03□□□□□ -1.12
BECN1-209ENST00000589492 GNL3LQ9NVN8 582 aaKnown RBP8.03□□□□□ -1.12
BECN1-209ENST00000589492 YBX2Q9Y2T7 364 aaKnown RBP8.03□□□□□ -1.12
BECN1-209ENST00000589492 RABGAP1Q9Y3P9 1069 aa8.03□□□□□ -1.12
BECN1-209ENST00000589492 SMCHD1A6NHR9 2005 aa8.03□□□□□ -1.12
BECN1-209ENST00000589492 MROH7-TTC4A0A0A0MT08 1334 aa8.03□□□□□ -1.12
BECN1-209ENST00000589492 A0A1B0GUL7 405 aa8.02□□□□□ -1.13
BECN1-209ENST00000589492 C19orf81C9J6K1 198 aa8.02□□□□□ -1.13
BECN1-209ENST00000589492 USP17L10C9JJH3 530 aa8.02□□□□□ -1.13
BECN1-209ENST00000589492 SMIM22K7EJ46 135 aa8.02□□□□□ -1.13
BECN1-209ENST00000589492 APBB1O00213 710 aa8.02□□□□□ -1.13
BECN1-209ENST00000589492 HIP1O00291 1037 aa8.02□□□□□ -1.13
BECN1-209ENST00000589492 GDF11O95390 407 aa8.02□□□□□ -1.13
BECN1-209ENST00000589492 ACRP10323 421 aa8.02□□□□□ -1.13
BECN1-209ENST00000589492 PDE1AP54750 535 aa8.02□□□□□ -1.13
BECN1-209ENST00000589492 CCNA1P78396 465 aa8.02□□□□□ -1.13
BECN1-209ENST00000589492 TFCP2Q12800 502 aa8.02□□□□□ -1.13
BECN1-209ENST00000589492 RASIP1Q5U651 963 aa8.02□□□□□ -1.13
BECN1-209ENST00000589492 SLC44A5Q8NCS7 719 aa8.02□□□□□ -1.13
BECN1-209ENST00000589492 IL1RAPL2Q9NP60 686 aa8.02□□□□□ -1.13
BECN1-209ENST00000589492 EMILIN3Q9NT22 766 aa8.02□□□□□ -1.13
BECN1-209ENST00000589492 BTBD7Q9P203 1132 aa8.02□□□□□ -1.13
BECN1-209ENST00000589492 ABCF2Q9UG63 623 aa8.02□□□□□ -1.13
BECN1-209ENST00000589492 DENND2AQ9ULE3 1009 aa8.02□□□□□ -1.13
BECN1-209ENST00000589492 PHF24Q9UPV7 400 aa8.02□□□□□ -1.13
BECN1-209ENST00000589492 IVNS1ABPQ9Y6Y0 642 aa8.02□□□□□ -1.13
BECN1-209ENST00000589492 CHD9Q3L8U1 2897 aa8.02□□□□□ -1.13
BECN1-209ENST00000589492 PDS5AQ29RF7 1337 aaKnown RBP8.02□□□□□ -1.13
BECN1-209ENST00000589492 SALL3Q9BXA9 1300 aa8.02□□□□□ -1.13
BECN1-209ENST00000589492 ZNF236Q9UL36 1845 aa8.01□□□□□ -1.13
BECN1-209ENST00000589492 A0A1W2PQ45 241 aaPredicted RBP8.01□□□□□ -1.13
BECN1-209ENST00000589492 A0A1W2PQY0 241 aa8.01□□□□□ -1.13
BECN1-209ENST00000589492 TLL1O43897 1013 aa8.01□□□□□ -1.13
BECN1-209ENST00000589492 PGK1P00558 417 aa8.01□□□□□ -1.13
BECN1-209ENST00000589492 TIMP1P01033 207 aa8.01□□□□□ -1.13
BECN1-209ENST00000589492 ASNSP08243 561 aa8.01□□□□□ -1.13
BECN1-209ENST00000589492 ATP5JP18859 108 aa8.01□□□□□ -1.13
BECN1-209ENST00000589492 NHLH1Q02575 133 aa8.01□□□□□ -1.13
BECN1-209ENST00000589492 TTF1Q15361 905 aaPredicted RBP8.01□□□□□ -1.13
BECN1-209ENST00000589492 RAB30Q15771 203 aa8.01□□□□□ -1.13
BECN1-209ENST00000589492 ZYXQ15942 572 aaKnown RBP8.01□□□□□ -1.13
BECN1-209ENST00000589492 TTC22Q5TAA0 569 aa8.01□□□□□ -1.13
BECN1-209ENST00000589492 OLFML2BQ68BL8 750 aa8.01□□□□□ -1.13
BECN1-209ENST00000589492 ZNF365Q70YC5 407 aa8.01□□□□□ -1.13
BECN1-209ENST00000589492 DPP9Q86TI2 863 aa8.01□□□□□ -1.13
BECN1-209ENST00000589492 PLEKHM2Q8IWE5 1019 aa8.01□□□□□ -1.13
BECN1-209ENST00000589492 ZNF384Q8TF68 577 aa8.01□□□□□ -1.13
BECN1-209ENST00000589492 FAM163AQ96GL9 167 aaPredicted RBP8.01□□□□□ -1.13
BECN1-209ENST00000589492 DNAJC18Q9H819 358 aa8.01□□□□□ -1.13
BECN1-209ENST00000589492 SLC28A3Q9HAS3 691 aa8.01□□□□□ -1.13
BECN1-209ENST00000589492 CD320Q9NPF0 282 aa8.01□□□□□ -1.13
BECN1-209ENST00000589492 HERC5Q9UII4 1024 aaKnown RBP8.01□□□□□ -1.13
BECN1-209ENST00000589492 MSRAQ9UJ68 235 aa8.01□□□□□ -1.13
BECN1-209ENST00000589492 CHD7Q9P2D1 2997 aa8.01□□□□□ -1.13
BECN1-209ENST00000589492 GPR75-ASB3A0A0A6YYF3 556 aa8□□□□□ -1.13
BECN1-209ENST00000589492 PI4K2BG5E9Z4 385 aa8□□□□□ -1.13
BECN1-209ENST00000589492 RFXAPO00287 272 aa8□□□□□ -1.13
BECN1-209ENST00000589492 SMARCA5O60264 1052 aaPredicted RBP8□□□□□ -1.13
BECN1-209ENST00000589492 COBLO75128 1261 aa8□□□□□ -1.13
BECN1-209ENST00000589492 CSF2RAP15509 400 aa8□□□□□ -1.13
BECN1-209ENST00000589492 ADORA2AP29274 412 aa8□□□□□ -1.13
BECN1-209ENST00000589492 MECOMQ03112 1051 aa8□□□□□ -1.13
BECN1-209ENST00000589492 PPIGQ13427 754 aaKnown RBP eCLIP8□□□□□ -1.13
BECN1-209ENST00000589492 TTC39AQ5SRH9 613 aa8□□□□□ -1.13
BECN1-209ENST00000589492 MFSD5Q6N075 450 aa8□□□□□ -1.13
BECN1-209ENST00000589492 USP17L2Q6R6M4 530 aa8□□□□□ -1.13
BECN1-209ENST00000589492 SLF2Q8IX21 1173 aa8□□□□□ -1.13
BECN1-209ENST00000589492 ZGPATQ8N5A5 531 aaKnown RBP8□□□□□ -1.13
BECN1-209ENST00000589492 EAF2Q96CJ1 260 aaPredicted RBP8□□□□□ -1.13
BECN1-209ENST00000589492 NEUROD6Q96NK8 337 aa8□□□□□ -1.13
BECN1-209ENST00000589492 ARID3AQ99856 593 aa8□□□□□ -1.13
BECN1-209ENST00000589492 XPNPEP3Q9NQH7 507 aa8□□□□□ -1.13
BECN1-209ENST00000589492 TBX21Q9UL17 535 aa8□□□□□ -1.13
BECN1-209ENST00000589492 ZBTB21Q9ULJ3 1066 aa8□□□□□ -1.13
BECN1-209ENST00000589492 PRRC2BQ5JSZ5 2229 aaKnown RBP8□□□□□ -1.13
BECN1-209ENST00000589492 CDK5RAP2Q96SN8 1893 aa8□□□□□ -1.13
BECN1-209ENST00000589492 DCDC2CA8MYV0 355 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms