RNA–Protein interactions for RNA: ENST00000589165.5

ERCC1-208, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

APPRIS P1 TSL 5 BASIC

Gene ERCC1, Length 1,453 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-208ENST00000589165 MYCP01106 439 aaPredicted RBP16.42■□□□□ 0.22
ERCC1-208ENST00000589165 CCL5P13501 91 aa16.42■□□□□ 0.22
ERCC1-208ENST00000589165 NT5C2P49902 561 aa16.42■□□□□ 0.22
ERCC1-208ENST00000589165 AKNAD1Q5T1N1 836 aa16.42■□□□□ 0.22
ERCC1-208ENST00000589165 TRMT44Q8IYL2 757 aaKnown RBP16.42■□□□□ 0.22
ERCC1-208ENST00000589165 STAG1Q8WVM7 1258 aa16.42■□□□□ 0.22
ERCC1-208ENST00000589165 MOV10L1Q9BXT6 1211 aaKnown RBP16.42■□□□□ 0.22
ERCC1-208ENST00000589165 NBPF3Q9H094 633 aa16.42■□□□□ 0.22
ERCC1-208ENST00000589165 IL17RBQ9NRM6 502 aa16.42■□□□□ 0.22
ERCC1-208ENST00000589165 FBXO28Q9NVF7 368 aa16.42■□□□□ 0.22
ERCC1-208ENST00000589165 RAD50Q92878 1312 aa16.41■□□□□ 0.22
ERCC1-208ENST00000589165 MKI67P46013 3256 aaKnown RBP16.41■□□□□ 0.22
ERCC1-208ENST00000589165 SLC15A5A6NIM6 579 aa16.41■□□□□ 0.22
ERCC1-208ENST00000589165 VWA5AO00534 786 aa16.41■□□□□ 0.22
ERCC1-208ENST00000589165 HMGCRP04035 888 aa16.41■□□□□ 0.22
ERCC1-208ENST00000589165 EN2P19622 333 aaPredicted RBP16.41■□□□□ 0.22
ERCC1-208ENST00000589165 RGS2P41220 211 aa16.41■□□□□ 0.22
ERCC1-208ENST00000589165 HAND2P61296 217 aa16.41■□□□□ 0.22
ERCC1-208ENST00000589165 NUP88Q99567 741 aaPredicted RBP16.41■□□□□ 0.22
ERCC1-208ENST00000589165 RNF41Q9H4P4 317 aaPredicted RBP16.41■□□□□ 0.22
ERCC1-208ENST00000589165 CWC22Q9HCG8 908 aaKnown RBP16.41■□□□□ 0.22
ERCC1-208ENST00000589165 TNRC18O15417 2968 aaPredicted RBP16.4■□□□□ 0.22
ERCC1-208ENST00000589165 ZNF213O14771 459 aa16.4■□□□□ 0.22
ERCC1-208ENST00000589165 STRNO43815 780 aa16.4■□□□□ 0.22
ERCC1-208ENST00000589165 GJB1P08034 283 aa16.4■□□□□ 0.22
ERCC1-208ENST00000589165 CYP2B6P20813 491 aa16.4■□□□□ 0.22
ERCC1-208ENST00000589165 PTPREP23469 700 aa16.4■□□□□ 0.22
ERCC1-208ENST00000589165 CHMLP26374 656 aa16.4■□□□□ 0.22
ERCC1-208ENST00000589165 MAP2K5Q13163 448 aa16.4■□□□□ 0.22
ERCC1-208ENST00000589165 GRB14Q14449 540 aa16.4■□□□□ 0.22
ERCC1-208ENST00000589165 TMEM132BQ14DG7 1078 aa16.4■□□□□ 0.22
ERCC1-208ENST00000589165 MFSD6Q6ZSS7 791 aa16.4■□□□□ 0.22
ERCC1-208ENST00000589165 TBC1D10CQ8IV04 446 aa16.4■□□□□ 0.22
ERCC1-208ENST00000589165 LRRC47Q8N1G4 583 aaKnown RBP16.4■□□□□ 0.22
ERCC1-208ENST00000589165 PRPF38AQ8NAV1 312 aaKnown RBP16.4■□□□□ 0.22
ERCC1-208ENST00000589165 NKX2-3Q8TAU0 364 aa16.4■□□□□ 0.22
ERCC1-208ENST00000589165 RUFY2Q8WXA3 655 aa16.4■□□□□ 0.22
ERCC1-208ENST00000589165 GMCL1Q96IK5 515 aa16.4■□□□□ 0.22
ERCC1-208ENST00000589165 SLF1Q9BQI6 1058 aa16.4■□□□□ 0.22
ERCC1-208ENST00000589165 RNF208Q9H0X6 261 aa16.4■□□□□ 0.22
ERCC1-208ENST00000589165 IL25Q9H293 177 aa16.4■□□□□ 0.22
ERCC1-208ENST00000589165 MROH8Q9H579 483 aa16.4■□□□□ 0.22
ERCC1-208ENST00000589165 TCP11L1Q9NUJ3 509 aa16.4■□□□□ 0.22
ERCC1-208ENST00000589165 CTNNA3Q9UI47 895 aa16.4■□□□□ 0.22
ERCC1-208ENST00000589165 STX8Q9UNK0 236 aa16.4■□□□□ 0.22
ERCC1-208ENST00000589165 IVNS1ABPQ9Y6Y0 642 aa16.4■□□□□ 0.22
ERCC1-208ENST00000589165 RLFQ13129 1914 aa16.39■□□□□ 0.21
ERCC1-208ENST00000589165 NMT2O60551 498 aa16.39■□□□□ 0.21
ERCC1-208ENST00000589165 NEFLP07196 543 aa16.39■□□□□ 0.21
ERCC1-208ENST00000589165 HOXC6P09630 235 aa16.39■□□□□ 0.21
ERCC1-208ENST00000589165 ERCC3P19447 782 aa16.39■□□□□ 0.21
ERCC1-208ENST00000589165 SLFN13Q68D06 897 aa16.39■□□□□ 0.21
ERCC1-208ENST00000589165 SKAP1Q86WV1 359 aa16.39■□□□□ 0.21
ERCC1-208ENST00000589165 REPS2Q8NFH8 660 aa16.39■□□□□ 0.21
ERCC1-208ENST00000589165 TRIB2Q92519 343 aa16.39■□□□□ 0.21
ERCC1-208ENST00000589165 APBA2Q99767 749 aa16.39■□□□□ 0.21
ERCC1-208ENST00000589165 UNC93B1Q9H1C4 597 aa16.39■□□□□ 0.21
ERCC1-208ENST00000589165 TOMM22Q9NS69 142 aa16.39■□□□□ 0.21
ERCC1-208ENST00000589165 DOCK3Q8IZD9 2030 aa16.39■□□□□ 0.21
ERCC1-208ENST00000589165 A0A0G2JMZ2 1700 aa16.38■□□□□ 0.21
ERCC1-208ENST00000589165 SLC25A27O95847 323 aa16.38■□□□□ 0.21
ERCC1-208ENST00000589165 BMP3P12645 472 aa16.38■□□□□ 0.21
ERCC1-208ENST00000589165 CAPN2P17655 700 aa16.38■□□□□ 0.21
ERCC1-208ENST00000589165 GJA8P48165 433 aa16.38■□□□□ 0.21
ERCC1-208ENST00000589165 RRP12Q5JTH9 1297 aaKnown RBP16.38■□□□□ 0.21
ERCC1-208ENST00000589165 WDR78Q5VTH9 848 aa16.38■□□□□ 0.21
ERCC1-208ENST00000589165 ABRAQ8N0Z2 381 aa16.38■□□□□ 0.21
ERCC1-208ENST00000589165 PAK6Q9NQU5 681 aaPredicted RBP16.38■□□□□ 0.21
ERCC1-208ENST00000589165 FEM1BQ9UK73 627 aa16.38■□□□□ 0.21
ERCC1-208ENST00000589165 ZNF214Q9UL59 606 aaPredicted RBP16.38■□□□□ 0.21
ERCC1-208ENST00000589165 RBBP6Q7Z6E9 1792 aaKnown RBP16.38■□□□□ 0.21
ERCC1-208ENST00000589165 ZKSCAN1P17029 563 aaPredicted RBP16.37■□□□□ 0.21
ERCC1-208ENST00000589165 COPB2P35606 906 aa16.37■□□□□ 0.21
ERCC1-208ENST00000589165 STAT3P40763 770 aa16.37■□□□□ 0.21
ERCC1-208ENST00000589165 PLS1Q14651 629 aa16.37■□□□□ 0.21
ERCC1-208ENST00000589165 IMMTQ16891 758 aaKnown RBP16.37■□□□□ 0.21
ERCC1-208ENST00000589165 MAP3K21Q5TCX8 1036 aa16.37■□□□□ 0.21
ERCC1-208ENST00000589165 SAMD1Q6SPF0 538 aaPredicted RBP16.37■□□□□ 0.21
ERCC1-208ENST00000589165 RIOX2Q8IUF8 465 aa16.37■□□□□ 0.21
ERCC1-208ENST00000589165 ESR2Q92731 530 aa16.37■□□□□ 0.21
ERCC1-208ENST00000589165 TTC14Q96N46 770 aa16.37■□□□□ 0.21
ERCC1-208ENST00000589165 ATP2A1O14983 1001 aa16.36■□□□□ 0.21
ERCC1-208ENST00000589165 PLA2G6O60733 806 aa16.36■□□□□ 0.21
ERCC1-208ENST00000589165 SLC1A4P43007 532 aa16.36■□□□□ 0.21
ERCC1-208ENST00000589165 NEDD4P46934 1319 aa16.36■□□□□ 0.21
ERCC1-208ENST00000589165 RPTORQ8N122 1335 aa16.36■□□□□ 0.21
ERCC1-208ENST00000589165 SGSM2O43147 1006 aa16.35■□□□□ 0.21
ERCC1-208ENST00000589165 SGPL1O95470 568 aa16.35■□□□□ 0.21
ERCC1-208ENST00000589165 FDX1P10109 184 aa16.35■□□□□ 0.21
ERCC1-208ENST00000589165 TOP1P11387 765 aaKnown RBP16.35■□□□□ 0.21
ERCC1-208ENST00000589165 MCCP23508 829 aa16.35■□□□□ 0.21
ERCC1-208ENST00000589165 ADORA2AP29274 412 aa16.35■□□□□ 0.21
ERCC1-208ENST00000589165 RCSD1Q6JBY9 416 aa16.35■□□□□ 0.21
ERCC1-208ENST00000589165 NCAPG2Q86XI2 1143 aa16.35■□□□□ 0.21
ERCC1-208ENST00000589165 U2AF1L4Q8WU68 220 aaKnown RBP16.35■□□□□ 0.21
ERCC1-208ENST00000589165 CHURC1Q8WUH1 139 aa16.35■□□□□ 0.21
ERCC1-208ENST00000589165 SHISA4Q96DD7 197 aa16.35■□□□□ 0.21
ERCC1-208ENST00000589165 TEX13BQ9BXU2 312 aa16.35■□□□□ 0.21
ERCC1-208ENST00000589165 SLC38A10Q9HBR0 1119 aa16.35■□□□□ 0.21
ERCC1-208ENST00000589165 PLXNB2O15031 1838 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms