RNA–Protein interactions for RNA: ENST00000589161.1

CIRBP-221, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 769 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-221ENST00000589161 ZMYM6O95789 1325 aa22.81■■□□□ 1.24
CIRBP-221ENST00000589161 PDE4AP27815 886 aa22.8■■□□□ 1.24
CIRBP-221ENST00000589161 MAP2K5Q13163 448 aa22.8■■□□□ 1.24
CIRBP-221ENST00000589161 U2AF1L4Q8WU68 220 aaKnown RBP22.8■■□□□ 1.24
CIRBP-221ENST00000589161 APBA2Q99767 749 aa22.8■■□□□ 1.24
CIRBP-221ENST00000589161 PPP1R9AQ9ULJ8 1098 aa22.8■■□□□ 1.24
CIRBP-221ENST00000589161 GREB1LQ9C091 1923 aaPredicted RBP22.79■■□□□ 1.24
CIRBP-221ENST00000589161 TSPY2A6NKD2 308 aa22.79■■□□□ 1.24
CIRBP-221ENST00000589161 STRNO43815 780 aa22.79■■□□□ 1.24
CIRBP-221ENST00000589161 SGPL1O95470 568 aa22.79■■□□□ 1.24
CIRBP-221ENST00000589161 NDUFB10O96000 172 aa22.79■■□□□ 1.24
CIRBP-221ENST00000589161 ZKSCAN1P17029 563 aaPredicted RBP22.79■■□□□ 1.24
CIRBP-221ENST00000589161 PLS1Q14651 629 aa22.79■■□□□ 1.24
CIRBP-221ENST00000589161 CWC27Q6UX04 472 aaKnown RBP22.79■■□□□ 1.24
CIRBP-221ENST00000589161 TRIB2Q92519 343 aa22.79■■□□□ 1.24
CIRBP-221ENST00000589161 MROH8Q9H579 483 aa22.79■■□□□ 1.24
CIRBP-221ENST00000589161 PAK6Q9NQU5 681 aaPredicted RBP22.79■■□□□ 1.24
CIRBP-221ENST00000589161 FBXO28Q9NVF7 368 aa22.79■■□□□ 1.24
CIRBP-221ENST00000589161 RPTORQ8N122 1335 aa22.79■■□□□ 1.24
CIRBP-221ENST00000589161 ORC4O43929 436 aa22.78■■□□□ 1.24
CIRBP-221ENST00000589161 FGRP09769 529 aa22.78■■□□□ 1.24
CIRBP-221ENST00000589161 GRB14Q14449 540 aa22.78■■□□□ 1.24
CIRBP-221ENST00000589161 GMCL1P1Q8NEA9 526 aa22.78■■□□□ 1.24
CIRBP-221ENST00000589161 SHISA4Q96DD7 197 aa22.78■■□□□ 1.24
CIRBP-221ENST00000589161 HMX1Q9NP08 348 aaPredicted RBP22.78■■□□□ 1.24
CIRBP-221ENST00000589161 INCENPQ9NQS7 918 aa22.78■■□□□ 1.24
CIRBP-221ENST00000589161 VWA5AO00534 786 aa22.77■■□□□ 1.24
CIRBP-221ENST00000589161 RANBP6O60518 1105 aaKnown RBP22.77■■□□□ 1.24
CIRBP-221ENST00000589161 SLC25A27O95847 323 aa22.77■■□□□ 1.24
CIRBP-221ENST00000589161 ERCC3P19447 782 aa22.77■■□□□ 1.24
CIRBP-221ENST00000589161 TMEM132BQ14DG7 1078 aa22.77■■□□□ 1.24
CIRBP-221ENST00000589161 TTC22Q5TAA0 569 aa22.77■■□□□ 1.24
CIRBP-221ENST00000589161 DEFB118Q96PH6 123 aa22.77■■□□□ 1.24
CIRBP-221ENST00000589161 NUP88Q99567 741 aaPredicted RBP22.77■■□□□ 1.24
CIRBP-221ENST00000589161 SLF1Q9BQI6 1058 aa22.77■■□□□ 1.24
CIRBP-221ENST00000589161 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.77■■□□□ 1.24
CIRBP-221ENST00000589161 TFRCP02786 760 aaKnown RBP22.76■■□□□ 1.23
CIRBP-221ENST00000589161 HOXC6P09630 235 aa22.76■■□□□ 1.23
CIRBP-221ENST00000589161 PCP11498 1178 aaKnown RBP22.76■■□□□ 1.23
CIRBP-221ENST00000589161 TRIM32Q13049 653 aa22.76■■□□□ 1.23
CIRBP-221ENST00000589161 NCAPG2Q86XI2 1143 aa22.76■■□□□ 1.23
CIRBP-221ENST00000589161 LRRC47Q8N1G4 583 aaKnown RBP22.76■■□□□ 1.23
CIRBP-221ENST00000589161 PRPF38AQ8NAV1 312 aaKnown RBP22.76■■□□□ 1.23
CIRBP-221ENST00000589161 TOMM22Q9NS69 142 aa22.76■■□□□ 1.23
CIRBP-221ENST00000589161 MAP3K21Q5TCX8 1036 aa22.75■■□□□ 1.23
CIRBP-221ENST00000589161 SLFN13Q68D06 897 aa22.75■■□□□ 1.23
CIRBP-221ENST00000589161 DPP9Q86TI2 863 aa22.75■■□□□ 1.23
CIRBP-221ENST00000589161 ABRAQ8N0Z2 381 aa22.75■■□□□ 1.23
CIRBP-221ENST00000589161 FEM1BQ9UK73 627 aa22.75■■□□□ 1.23
CIRBP-221ENST00000589161 STX8Q9UNK0 236 aa22.75■■□□□ 1.23
CIRBP-221ENST00000589161 TACC3Q9Y6A5 838 aa22.75■■□□□ 1.23
CIRBP-221ENST00000589161 TNRC18O15417 2968 aaPredicted RBP22.75■■□□□ 1.23
CIRBP-221ENST00000589161 PLXNB2O15031 1838 aa22.75■■□□□ 1.23
CIRBP-221ENST00000589161 RLFQ13129 1914 aa22.74■■□□□ 1.23
CIRBP-221ENST00000589161 BRCA2P51587 3418 aa22.74■■□□□ 1.23
CIRBP-221ENST00000589161 PRKAR2AP13861 404 aaKnown RBP22.74■■□□□ 1.23
CIRBP-221ENST00000589161 COPB2P35606 906 aa22.74■■□□□ 1.23
CIRBP-221ENST00000589161 STAT3P40763 770 aa22.74■■□□□ 1.23
CIRBP-221ENST00000589161 CCL14Q16627 93 aa22.74■■□□□ 1.23
CIRBP-221ENST00000589161 MFSD14CQ5VZR4 134 aa22.74■■□□□ 1.23
CIRBP-221ENST00000589161 MFSD6Q6ZSS7 791 aa22.74■■□□□ 1.23
CIRBP-221ENST00000589161 RIOX2Q8IUF8 465 aa22.74■■□□□ 1.23
CIRBP-221ENST00000589161 IL17RBQ9NRM6 502 aa22.74■■□□□ 1.23
CIRBP-221ENST00000589161 SLC5A4Q9NY91 659 aa22.74■■□□□ 1.23
CIRBP-221ENST00000589161 ZNF213O14771 459 aa22.73■■□□□ 1.23
CIRBP-221ENST00000589161 BMP3P12645 472 aa22.73■■□□□ 1.23
CIRBP-221ENST00000589161 GSPT1P15170 499 aaKnown RBP22.73■■□□□ 1.23
CIRBP-221ENST00000589161 ADORA2AP29274 412 aa22.73■■□□□ 1.23
CIRBP-221ENST00000589161 HAND2P61296 217 aa22.73■■□□□ 1.23
CIRBP-221ENST00000589161 CACNB2Q08289 660 aaPredicted RBP22.73■■□□□ 1.23
CIRBP-221ENST00000589161 RRP12Q5JTH9 1297 aaKnown RBP22.73■■□□□ 1.23
CIRBP-221ENST00000589161 AKNAD1Q5T1N1 836 aa22.73■■□□□ 1.23
CIRBP-221ENST00000589161 PRPF38BQ5VTL8 546 aaKnown RBP22.73■■□□□ 1.23
CIRBP-221ENST00000589161 CRISPLD2Q9H0B8 497 aa22.73■■□□□ 1.23
CIRBP-221ENST00000589161 RNF41Q9H4P4 317 aaPredicted RBP22.73■■□□□ 1.23
CIRBP-221ENST00000589161 CTDP1Q9Y5B0 961 aaPredicted RBP22.73■■□□□ 1.23
CIRBP-221ENST00000589161 A0A0G2JMZ2 1700 aa22.72■■□□□ 1.23
CIRBP-221ENST00000589161 ZBED4O75132 1171 aa22.72■■□□□ 1.23
CIRBP-221ENST00000589161 FCER1AP12319 257 aa22.72■■□□□ 1.23
CIRBP-221ENST00000589161 REPS2Q8NFH8 660 aa22.72■■□□□ 1.23
CIRBP-221ENST00000589161 STAG1Q8WVM7 1258 aa22.72■■□□□ 1.23
CIRBP-221ENST00000589161 GMCL1Q96IK5 515 aa22.72■■□□□ 1.23
CIRBP-221ENST00000589161 DSCC1Q9BVC3 393 aa22.72■■□□□ 1.23
CIRBP-221ENST00000589161 TCP11L1Q9NUJ3 509 aa22.72■■□□□ 1.23
CIRBP-221ENST00000589161 ZNF214Q9UL59 606 aaPredicted RBP22.72■■□□□ 1.23
CIRBP-221ENST00000589161 PDE4DIPQ5VU43 2346 aa22.71■■□□□ 1.23
CIRBP-221ENST00000589161 NMT2O60551 498 aa22.71■■□□□ 1.23
CIRBP-221ENST00000589161 FARP2O94887 1054 aaPredicted RBP22.71■■□□□ 1.23
CIRBP-221ENST00000589161 SLC1A4P43007 532 aa22.71■■□□□ 1.23
CIRBP-221ENST00000589161 NOVP48745 357 aa22.71■■□□□ 1.23
CIRBP-221ENST00000589161 NT5C2P49902 561 aa22.71■■□□□ 1.23
CIRBP-221ENST00000589161 UBE2Q1Q7Z7E8 422 aa22.71■■□□□ 1.23
CIRBP-221ENST00000589161 NPLOC4Q8TAT6 608 aa22.71■■□□□ 1.23
CIRBP-221ENST00000589161 KIFC2Q96AC6 838 aa22.71■■□□□ 1.23
CIRBP-221ENST00000589161 TEX13BQ9BXU2 312 aa22.71■■□□□ 1.23
CIRBP-221ENST00000589161 CTNNA3Q9UI47 895 aa22.71■■□□□ 1.23
CIRBP-221ENST00000589161 FDX1P10109 184 aa22.7■■□□□ 1.22
CIRBP-221ENST00000589161 CHURC1Q8WUH1 139 aa22.7■■□□□ 1.22
CIRBP-221ENST00000589161 RUFY2Q8WXA3 655 aa22.7■■□□□ 1.22
CIRBP-221ENST00000589161 FLRT1Q9NZU1 646 aa22.7■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms